Click here to switch to the map view.

The map label for this gene is flgC [H]

Identifier: 225686010

GI number: 225686010

Start: 142776

End: 143198

Strand: Direct

Name: flgC [H]

Synonym: BMEA_B0153

Alternate gene names: 225686010

Gene position: 142776-143198 (Clockwise)

Preceding gene: 225686009

Following gene: 225686011

Centisome position: 12.04

GC content: 56.97

Gene sequence:

>423_bases
ATGTCTTCCGATGCCTTGCAAAGCACATTGAAGATCGCGGCATCGGGCCTTTCGGCCCAGTCGACACGCCTGCGCATCGT
TTCCGAAAATATTGCCAATGCGCAGTCCACCGCCAGGACGGCGGATACCGATCCCTATCGCCGCAAGACGGTTTCGTTCC
GCACCGAGCTTGAACAAGGCACGGGTGCAGCCGAGGTTCGGGTTGCGGAAGTGGGCAAGGATACCTCGCCCTTTATCGAA
CAATATGATCCGAGCCATCCCGCAGCGGATGCGCGCGGCTATGTCAAATATCCAAATGTCAACATGGTCGTCGAGATGGC
GGACATGCGCGAGGCAAACCGTTCCTACGAAGCCAATTTGCAGGTGGTCAGGCAGGCGCGTGAGCTGATTTCGATGACGA
TCGACCTCTTGAGGAGCACATAA

Upstream 100 bases:

>100_bases
AAATGATGAAGGCTGGCGAAATCGCCCGCGAATATTCGCTCAACACCAGCATCGTCAAGGCGTTCCATCGCATGATGCTT
TCGGTCGCGAAGGGGTAGCC

Downstream 100 bases:

>100_bases
TGTACGACTCGATCATGAGTGTTTCGGCGCGCAATGCCCTGTCGCGCCTGTCGGAAACCGTTGCCGAAAAGGGCGTTGGG
TCCGCTTCCGCACCGCAGGC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSSDALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEVRVAEVGKDTSPFIE
QYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRST

Sequences:

>Translated_140_residues
MSSDALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEVRVAEVGKDTSPFIE
QYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRST
>Mature_139_residues
SSDALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQGTGAAEVRVAEVGKDTSPFIEQ
YDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANLQVVRQARELISMTIDLLRST

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=132, Percent_Identity=40.9090909090909, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15427; Mature: 15296

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQG
CCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
TGAAEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANL
CCCCEEEHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHCCCHHHHH
QVVRQARELISMTIDLLRST
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSDALQSTLKIAASGLSAQSTRLRIVSENIANAQSTARTADTDPYRRKTVSFRTELEQG
CHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
TGAAEVRVAEVGKDTSPFIEQYDPSHPAADARGYVKYPNVNMVVEMADMREANRSYEANL
CCCCEEEHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHCCCHHHHH
QVVRQARELISMTIDLLRST
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]