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The map label for this gene is syrB [H]

Identifier: 225686000

GI number: 225686000

Start: 134691

End: 135128

Strand: Direct

Name: syrB [H]

Synonym: BMEA_B0143

Alternate gene names: 225686000

Gene position: 134691-135128 (Clockwise)

Preceding gene: 225685999

Following gene: 225686008

Centisome position: 11.36

GC content: 46.58

Gene sequence:

>438_bases
ATGGCCACTGAATTTGAGCATGGACCGGATATGTATACGCCGGAAGATGTTATAAAAAATTTTAAAGATCATTCTTCACA
GTCCCGGTCGCGCGGGACGAAAACTTTGGAAAATGAGAAACATACTGCGAATGGGCGTATGGTAAAGAGATACACGCCTG
AAGAACGCAGGAAAGTATTTTCTGAAATTGCGACGAGCGTTAAAAGCGGCCAGTCGAGCCTCAAGGACGCCCTGGCCACT
GCGGGCATTAGTGAGCAAACATACTATAATTGGAAAAAGATATTCACCGGAAACGGGCCTGCAAGTTCAACGACATTAGG
CAAGGACTTGCAGGAATTGATTGAGCTTGAAGCTGAAAATCAACGGCTCCGTCAGGAACTTGCAGATAAGTTGCGAATGG
AGAATGCAGAGCTTCGCCGTCGTCTTGGGAAAGTGTGA

Upstream 100 bases:

>100_bases
TGCGCCATGCCCAAAATGGGCAGTCAGAGCCAGGCGGAATATCGGATGATGATTTGCGCGCAATGGGGCATAATAAGAAC
TATAGATGGAGCATTCATCG

Downstream 100 bases:

>100_bases
CTAGAGCATGTTTCGATCTGAATGAATCAGATCGGCGCTCTAACTATTTGTTTTGACGCGCATCTTTTCCGAAAACCGTT
TCGCACTTTTCGGGATGCAC

Product: putative transcriptional regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MATEFEHGPDMYTPEDVIKNFKDHSSQSRSRGTKTLENEKHTANGRMVKRYTPEERRKVFSEIATSVKSGQSSLKDALAT
AGISEQTYYNWKKIFTGNGPASSTTLGKDLQELIELEAENQRLRQELADKLRMENAELRRRLGKV

Sequences:

>Translated_145_residues
MATEFEHGPDMYTPEDVIKNFKDHSSQSRSRGTKTLENEKHTANGRMVKRYTPEERRKVFSEIATSVKSGQSSLKDALAT
AGISEQTYYNWKKIFTGNGPASSTTLGKDLQELIELEAENQRLRQELADKLRMENAELRRRLGKV
>Mature_144_residues
ATEFEHGPDMYTPEDVIKNFKDHSSQSRSRGTKTLENEKHTANGRMVKRYTPEERRKVFSEIATSVKSGQSSLKDALATA
GISEQTYYNWKKIFTGNGPASSTTLGKDLQELIELEAENQRLRQELADKLRMENAELRRRLGKV

Specific function: Responsible for the repression of syrM activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the syrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16537; Mature: 16406

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEFEHGPDMYTPEDVIKNFKDHSSQSRSRGTKTLENEKHTANGRMVKRYTPEERRKVF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCHHHHHHH
SEIATSVKSGQSSLKDALATAGISEQTYYNWKKIFTGNGPASSTTLGKDLQELIELEAEN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QRLRQELADKLRMENAELRRRLGKV
HHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure 
ATEFEHGPDMYTPEDVIKNFKDHSSQSRSRGTKTLENEKHTANGRMVKRYTPEERRKVF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCHHHHHHH
SEIATSVKSGQSSLKDALATAGISEQTYYNWKKIFTGNGPASSTTLGKDLQELIELEAEN
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
QRLRQELADKLRMENAELRRRLGKV
HHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]