Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is gnd [H]
Identifier: 225685973
GI number: 225685973
Start: 108329
End: 109738
Strand: Direct
Name: gnd [H]
Synonym: BMEA_B0114
Alternate gene names: 225685973
Gene position: 108329-109738 (Clockwise)
Preceding gene: 225685971
Following gene: 225685980
Centisome position: 9.14
GC content: 60.07
Gene sequence:
>1410_bases ATGGAAAAAGCAGATATCGGAATGGTCGGCCTTGGCGTCATGGGCTCCAACCTGGCGCTGAACATAGCCGAGAAGGGCTA CACCGTGGCCGTCTATGACCGTGATGAGCCTGTGCTGAAAGCTTTCATCGAAAAGGCTGGCCGGCTGCGCGACAAGATCA TTCCCTGCCCGACCTTTGAGGAACTGGCCGCGAATATCCGCAAGCCCCGTCCGATCATCTTTCTCATCAAGGCCGGTGCG CCAGTCGATACCGAGACCACCCGCCTCAAGGCATTCCTTGAGAAGGGCGATATCATGATCGATGCAGGCAATTCCGATTA TCGCGATACGGTGCGCCGCCTGAAGGCTCTTGGCCCCAATGATCCGACCTTTGTCGGCATGGGCGTTTCGGGTGGGGCGG AAGGCGCGCGCCATGGTCCGTCGATGATGGTCGGCGGCACGGAGCAGGCCTATGAGCGCATCGCGCCGATCCTGCTTGCT GTCGCCGCCAAATATCAGGGCGAGCCCTGCTGTGCGCTGGTCGGCCCGGATGGCGCGGGTCATTTCGTCAAAACCATCCA TAACGGTATTGAATATGCCGATATGCAGATGATCGCCGAAATTTACGGCATTCTGCGCGATGGCCTTGGCCTTTCAGCTC CGGCCATCGGCGATGTGTTCGAGAAGTGGAACGAAGGTCCGCTCAATTCCTATCTGATTGAAATCACCGCCAAGGTTCTC AAGTCCACCGACCCGGAAACCGGCAAGGCGATGGTCGATATGATCCTTGATGAAGCCGGCCAGAAGGGTACAGGCCGCTG GGCTGCCATTGAGGCGCAGATACTGGGCGTTCCGGCCACGGGCATCGAAGCCGCGGTTGCCGCCCGTTCGCTGTCCTCCA TGAAGGGCGAGCGGGAAGAGGCCGCCAAGGCGTATAAATCCGGTGCACGCACACTTGATATTGCCAACCAGACCCGCTTC CTTTCCGATCTGGAACAGGGCTTGCTGGCGGGCAAGATCGCCGCTTATGCGCAAGGCTTTGCAGTGATGGAAGCCGCCTC AAGGGAGCATGGCTGGAACATTCCGCTTGCCACCACGGCGCGCATCTGGCGCGCGGGCTGCATCATCCGCTCGCAGCTTC TGGATGATATTGCGCAGGCTTTTGAAGGCAATGAAAGCCGCAACCTGCTCATGGCCCCGGCCTTCGTGCCGCGCATGGAA ACATCTGTGAAAAGCCTTCGCCAGATTGTCGCGCAGGCCGCCCTTGCCAGCCTGCCGCTGCCCGCGCTCGGCTCTGCGCT CAGCTATTTCGACAGCTATACGCAGGCGCTTGGTACGGCCAATCTCATTCAGGGCCAGCGCGATTTCTTCGGCTCGCACG GCTTCAAGCGCATTGACAAGGAGGGGGATTTCCACGGCCCCTGGGGCTGA
Upstream 100 bases:
>100_bases AATTCGGTGGCGCTTTCCCCGGTTCCGGCTCGTTGGTCTTCATTGTTGCGAACGTGTCTGGACATAAGGGCGTCCGGCAA GTAATTCAGAAAGACACAAA
Downstream 100 bases:
>100_bases GTTTTCTGCCCCAGACAGCCTGGAACCGCTCTAACTATTTGTTTTGGTGCATTATTCCCCGCATAGGCGTTTCACACTTT TGGCTCGAAAATGTTCTAAT
Product: 6-phosphogluconate dehydrogenase
Products: NA
Alternate protein names: GNTZII [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MEKADIGMVGLGVMGSNLALNIAEKGYTVAVYDRDEPVLKAFIEKAGRLRDKIIPCPTFEELAANIRKPRPIIFLIKAGA PVDTETTRLKAFLEKGDIMIDAGNSDYRDTVRRLKALGPNDPTFVGMGVSGGAEGARHGPSMMVGGTEQAYERIAPILLA VAAKYQGEPCCALVGPDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLGLSAPAIGDVFEKWNEGPLNSYLIEITAKVL KSTDPETGKAMVDMILDEAGQKGTGRWAAIEAQILGVPATGIEAAVAARSLSSMKGEREEAAKAYKSGARTLDIANQTRF LSDLEQGLLAGKIAAYAQGFAVMEAASREHGWNIPLATTARIWRAGCIIRSQLLDDIAQAFEGNESRNLLMAPAFVPRME TSVKSLRQIVAQAALASLPLPALGSALSYFDSYTQALGTANLIQGQRDFFGSHGFKRIDKEGDFHGPWG
Sequences:
>Translated_469_residues MEKADIGMVGLGVMGSNLALNIAEKGYTVAVYDRDEPVLKAFIEKAGRLRDKIIPCPTFEELAANIRKPRPIIFLIKAGA PVDTETTRLKAFLEKGDIMIDAGNSDYRDTVRRLKALGPNDPTFVGMGVSGGAEGARHGPSMMVGGTEQAYERIAPILLA VAAKYQGEPCCALVGPDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLGLSAPAIGDVFEKWNEGPLNSYLIEITAKVL KSTDPETGKAMVDMILDEAGQKGTGRWAAIEAQILGVPATGIEAAVAARSLSSMKGEREEAAKAYKSGARTLDIANQTRF LSDLEQGLLAGKIAAYAQGFAVMEAASREHGWNIPLATTARIWRAGCIIRSQLLDDIAQAFEGNESRNLLMAPAFVPRME TSVKSLRQIVAQAALASLPLPALGSALSYFDSYTQALGTANLIQGQRDFFGSHGFKRIDKEGDFHGPWG >Mature_469_residues MEKADIGMVGLGVMGSNLALNIAEKGYTVAVYDRDEPVLKAFIEKAGRLRDKIIPCPTFEELAANIRKPRPIIFLIKAGA PVDTETTRLKAFLEKGDIMIDAGNSDYRDTVRRLKALGPNDPTFVGMGVSGGAEGARHGPSMMVGGTEQAYERIAPILLA VAAKYQGEPCCALVGPDGAGHFVKTIHNGIEYADMQMIAEIYGILRDGLGLSAPAIGDVFEKWNEGPLNSYLIEITAKVL KSTDPETGKAMVDMILDEAGQKGTGRWAAIEAQILGVPATGIEAAVAARSLSSMKGEREEAAKAYKSGARTLDIANQTRF LSDLEQGLLAGKIAAYAQGFAVMEAASREHGWNIPLATTARIWRAGCIIRSQLLDDIAQAFEGNESRNLLMAPAFVPRME TSVKSLRQIVAQAALASLPLPALGSALSYFDSYTQALGTANLIQGQRDFFGSHGFKRIDKEGDFHGPWG
Specific function: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH [H]
COG id: COG0362
COG function: function code G; 6-phosphogluconate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 6-phosphogluconate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI40068518, Length=471, Percent_Identity=44.5859872611465, Blast_Score=385, Evalue=1e-107, Organism=Escherichia coli, GI1788341, Length=471, Percent_Identity=45.859872611465, Blast_Score=426, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17542558, Length=472, Percent_Identity=43.4322033898305, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6321695, Length=471, Percent_Identity=45.6475583864119, Blast_Score=402, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6321977, Length=455, Percent_Identity=45.0549450549451, Blast_Score=377, Evalue=1e-105, Organism=Drosophila melanogaster, GI24639279, Length=465, Percent_Identity=46.4516129032258, Blast_Score=394, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR006114 - InterPro: IPR006113 - InterPro: IPR006115 - InterPro: IPR006184 - InterPro: IPR013328 - InterPro: IPR012284 - InterPro: IPR016040 - InterPro: IPR006183 [H]
Pfam domain/function: PF00393 6PGD; PF03446 NAD_binding_2 [H]
EC number: =1.1.1.44 [H]
Molecular weight: Translated: 50246; Mature: 50246
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00461 6PGD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKADIGMVGLGVMGSNLALNIAEKGYTVAVYDRDEPVLKAFIEKAGRLRDKIIPCPTFE CCCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHH ELAANIRKPRPIIFLIKAGAPVDTETTRLKAFLEKGDIMIDAGNSDYRDTVRRLKALGPN HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCC DPTFVGMGVSGGAEGARHGPSMMVGGTEQAYERIAPILLAVAAKYQGEPCCALVGPDGAG CCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC HFVKTIHNGIEYADMQMIAEIYGILRDGLGLSAPAIGDVFEKWNEGPLNSYLIEITAKVL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH KSTDPETGKAMVDMILDEAGQKGTGRWAAIEAQILGVPATGIEAAVAARSLSSMKGEREE HCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHH AAKAYKSGARTLDIANQTRFLSDLEQGLLAGKIAAYAQGFAVMEAASREHGWNIPLATTA HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RIWRAGCIIRSQLLDDIAQAFEGNESRNLLMAPAFVPRMETSVKSLRQIVAQAALASLPL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC PALGSALSYFDSYTQALGTANLIQGQRDFFGSHGFKRIDKEGDFHGPWG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MEKADIGMVGLGVMGSNLALNIAEKGYTVAVYDRDEPVLKAFIEKAGRLRDKIIPCPTFE CCCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHH ELAANIRKPRPIIFLIKAGAPVDTETTRLKAFLEKGDIMIDAGNSDYRDTVRRLKALGPN HHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCC DPTFVGMGVSGGAEGARHGPSMMVGGTEQAYERIAPILLAVAAKYQGEPCCALVGPDGAG CCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC HFVKTIHNGIEYADMQMIAEIYGILRDGLGLSAPAIGDVFEKWNEGPLNSYLIEITAKVL HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH KSTDPETGKAMVDMILDEAGQKGTGRWAAIEAQILGVPATGIEAAVAARSLSSMKGEREE HCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHH AAKAYKSGARTLDIANQTRFLSDLEQGLLAGKIAAYAQGFAVMEAASREHGWNIPLATTA HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RIWRAGCIIRSQLLDDIAQAFEGNESRNLLMAPAFVPRMETSVKSLRQIVAQAALASLPL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC PALGSALSYFDSYTQALGTANLIQGQRDFFGSHGFKRIDKEGDFHGPWG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10568751; 9298659 [H]