Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
---|---|
Accession | NC_012442 |
Length | 1,185,518 |
Click here to switch to the map view.
The map label for this gene is 225685971
Identifier: 225685971
GI number: 225685971
Start: 104491
End: 105816
Strand: Direct
Name: 225685971
Synonym: BMEA_B0111
Alternate gene names: NA
Gene position: 104491-105816 (Clockwise)
Preceding gene: 225685970
Following gene: 225685973
Centisome position: 8.81
GC content: 56.26
Gene sequence:
>1326_bases ATGAGCAATATCGTAACCCGGACAAGAACTGACGCCCGTATGCCGGATGCGACAGGGCCACAGGCACGGATACGCAGGAT TGCTCTTGTTATAGCAAGCGTCATATTCGGCGTGCTGCTGATCTCGTTTCGCCCGTTTACACCGGCGGGCGGGGCAGAGA CGGAGACTGGCGGCGATATCATCAACCAGCTTGGTTTCAGTTGCGTGGGGGCCGTTGCCCTTGCCTCCATGGCGATGTTC GCCAATTTGCGGAAACTTGCAGGCATCATACGTCCCGGCTGGCTCGTGATGCTCGTCTTTTTATTCGCATCGATATTTGC CAGTTCCGACCCGGCAACGGCGGTGCGCGGTGTTCTCCTCACCACGGTCGGAATTGTGGCGATCATAGCGGTTCTGGTCT TGCCGCAGGATGGCGACGGTTATTCTGCGCTGCTCGTATCGGTGGCGTCGGTCGTTATCGTCATTTCCTATGCCGGGGTT GTGTTGCTGCCGAGCCTTGGCACGCATGGGGCGGATGCTATCGAACCGCAGAACTCCTTTCTCTGGCGCGGTGTTTTCAG CCATAAAAACATTGCTGGCCCGGTGATGGCGGTTTTCGCGTTTGCCGGGCTTTATCTGTGGCGGCGCGGTTGGAAAACCA GCGGACTGCTGATTGGCCTTTCCGCGCTGGGTTTTGTTTCGCAAACCGGCTCCAAGACGACGATGGCGCTCGTGCCTTTT GCAATGCTGCTCGTTGTTCTTCCCGGCCTTATGGGATTGCGCAAGCTGACAGCGGGGCTGATTTTTGCAATCCAGCTTGC ATTTGCCACTTTTACTTTCGGCGTGGTGCTGTTCGAGCCGATCCGCCGTTTGGTTGAAAATATGGATGTGGACGCGACCT TTACCGGGCGCGTTTCGATCTGGAAGTTTGCACTGGAAGCCCTGTCGAAGCGGCCATGGACCGGCTATGGCTATGAAAGC TTCTGGAGTTCGGCATATGCCAGGCATGCGGCGCGGCCCTATTATCTCGATTGGGATGTGCGCGGCATCGTGCATGGTCA TAATTCCTATCTGGATGTCGCCATGACGATGGGTATCCCGGCACTTTTATGCGCGATTGCGGTCATCATCGTCATGCCGC TGGTTCATTATGCGCGGTGCAGGCCGGTGCGCGAGAACATGCTGCTGGCCGACTTCTTTTTGATGATCGTCTTGTTCGGA ACGCTCAATGCCATGATGGAAAGTTTTTTCTTCCGGCGCATGGACCCGGTCTGGCTCACACTTATCCTTGCCATTTTCGG CCTTGGCATGACGGCAAAAGTCGTCATCCCGAAGCGATCTGTCTAA
Upstream 100 bases:
>100_bases AAGGCCTTGCGGCGCGGTCTTGCGGCAGGCTTTGCGCCGGCTGGAATGTATTTTATCTATGTTGGATTGGGACGGGTTTT GGCACATTTTGGATATCTGA
Downstream 100 bases:
>100_bases TCGGAGTGACTTCATGAACATCGCGATTATCGGCACGGGGTTCGTCGCCGATTATTACATGACCACGCTGCGCAATTATC CTGAGCTTAGCCTGCGCGGT
Product: O-antigen polymerase
Products: NA
Alternate protein names: Exopolysaccharide Production Protein; Exopolysaccharide Production Protein EXOQ; O-Antigen Polymerase Family; ExoQ-Like Protein
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSNIVTRTRTDARMPDATGPQARIRRIALVIASVIFGVLLISFRPFTPAGGAETETGGDIINQLGFSCVGAVALASMAMF ANLRKLAGIIRPGWLVMLVFLFASIFASSDPATAVRGVLLTTVGIVAIIAVLVLPQDGDGYSALLVSVASVVIVISYAGV VLLPSLGTHGADAIEPQNSFLWRGVFSHKNIAGPVMAVFAFAGLYLWRRGWKTSGLLIGLSALGFVSQTGSKTTMALVPF AMLLVVLPGLMGLRKLTAGLIFAIQLAFATFTFGVVLFEPIRRLVENMDVDATFTGRVSIWKFALEALSKRPWTGYGYES FWSSAYARHAARPYYLDWDVRGIVHGHNSYLDVAMTMGIPALLCAIAVIIVMPLVHYARCRPVRENMLLADFFLMIVLFG TLNAMMESFFFRRMDPVWLTLILAIFGLGMTAKVVIPKRSV
Sequences:
>Translated_441_residues MSNIVTRTRTDARMPDATGPQARIRRIALVIASVIFGVLLISFRPFTPAGGAETETGGDIINQLGFSCVGAVALASMAMF ANLRKLAGIIRPGWLVMLVFLFASIFASSDPATAVRGVLLTTVGIVAIIAVLVLPQDGDGYSALLVSVASVVIVISYAGV VLLPSLGTHGADAIEPQNSFLWRGVFSHKNIAGPVMAVFAFAGLYLWRRGWKTSGLLIGLSALGFVSQTGSKTTMALVPF AMLLVVLPGLMGLRKLTAGLIFAIQLAFATFTFGVVLFEPIRRLVENMDVDATFTGRVSIWKFALEALSKRPWTGYGYES FWSSAYARHAARPYYLDWDVRGIVHGHNSYLDVAMTMGIPALLCAIAVIIVMPLVHYARCRPVRENMLLADFFLMIVLFG TLNAMMESFFFRRMDPVWLTLILAIFGLGMTAKVVIPKRSV >Mature_440_residues SNIVTRTRTDARMPDATGPQARIRRIALVIASVIFGVLLISFRPFTPAGGAETETGGDIINQLGFSCVGAVALASMAMFA NLRKLAGIIRPGWLVMLVFLFASIFASSDPATAVRGVLLTTVGIVAIIAVLVLPQDGDGYSALLVSVASVVIVISYAGVV LLPSLGTHGADAIEPQNSFLWRGVFSHKNIAGPVMAVFAFAGLYLWRRGWKTSGLLIGLSALGFVSQTGSKTTMALVPFA MLLVVLPGLMGLRKLTAGLIFAIQLAFATFTFGVVLFEPIRRLVENMDVDATFTGRVSIWKFALEALSKRPWTGYGYESF WSSAYARHAARPYYLDWDVRGIVHGHNSYLDVAMTMGIPALLCAIAVIIVMPLVHYARCRPVRENMLLADFFLMIVLFGT LNAMMESFFFRRMDPVWLTLILAIFGLGMTAKVVIPKRSV
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47853; Mature: 47721
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIVTRTRTDARMPDATGPQARIRRIALVIASVIFGVLLISFRPFTPAGGAETETGGDI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH INQLGFSCVGAVALASMAMFANLRKLAGIIRPGWLVMLVFLFASIFASSDPATAVRGVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH TTVGIVAIIAVLVLPQDGDGYSALLVSVASVVIVISYAGVVLLPSLGTHGADAIEPQNSF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCH LWRGVFSHKNIAGPVMAVFAFAGLYLWRRGWKTSGLLIGLSALGFVSQTGSKTTMALVPF HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AMLLVVLPGLMGLRKLTAGLIFAIQLAFATFTFGVVLFEPIRRLVENMDVDATFTGRVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHH WKFALEALSKRPWTGYGYESFWSSAYARHAARPYYLDWDVRGIVHGHNSYLDVAMTMGIP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCHHHHHHHHCHH ALLCAIAVIIVMPLVHYARCRPVRENMLLADFFLMIVLFGTLNAMMESFFFRRMDPVWLT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LILAIFGLGMTAKVVIPKRSV HHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure SNIVTRTRTDARMPDATGPQARIRRIALVIASVIFGVLLISFRPFTPAGGAETETGGDI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH INQLGFSCVGAVALASMAMFANLRKLAGIIRPGWLVMLVFLFASIFASSDPATAVRGVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH TTVGIVAIIAVLVLPQDGDGYSALLVSVASVVIVISYAGVVLLPSLGTHGADAIEPQNSF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCH LWRGVFSHKNIAGPVMAVFAFAGLYLWRRGWKTSGLLIGLSALGFVSQTGSKTTMALVPF HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH AMLLVVLPGLMGLRKLTAGLIFAIQLAFATFTFGVVLFEPIRRLVENMDVDATFTGRVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHH WKFALEALSKRPWTGYGYESFWSSAYARHAARPYYLDWDVRGIVHGHNSYLDVAMTMGIP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCHHHHHHHHCHH ALLCAIAVIIVMPLVHYARCRPVRENMLLADFFLMIVLFGTLNAMMESFFFRRMDPVWLT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LILAIFGLGMTAKVVIPKRSV HHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA