Definition | Brucella melitensis ATCC 23457 chromosome chromosome II, complete sequence. |
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Accession | NC_012442 |
Length | 1,185,518 |
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The map label for this gene is 225685960
Identifier: 225685960
GI number: 225685960
Start: 92995
End: 94098
Strand: Reverse
Name: 225685960
Synonym: BMEA_B0098
Alternate gene names: NA
Gene position: 94098-92995 (Counterclockwise)
Preceding gene: 225685961
Following gene: 225685951
Centisome position: 7.94
GC content: 59.6
Gene sequence:
>1104_bases ATGAGAAGAACGGCAGGCTCCATGATCGCCCTCTGCCTGACTATGATCGTTGCACAAGCCTATGCGCAATCCTCGCTTGG CATTGGCGCGAATGAGGTGGCGATGAAGCCGACCGGCCCTTTTGCGCATATCATCCAGTGGATGAACGAGCAGCAGCGTT CTTTCTATCTCGCCATGACCACCGCACTGAAAGCCATGCGTGAAGACCCGTTGCAGGCTGCCTGGGGACTGGTCGGGCTT TCCTTCATCTACGGCATTTTCCACGCCGTCGGGCCGGGGCACGGCAAGGCGGTTATCTCATCCTACATGATCGCCAATGA AACCGCGCTCCGGCGCGGCATTTTCCTGTCTTTCATTTCATCGCTTTTGCAGGCAATCATGGCGGTCGCCGTGGTGGGGC TTGCATGGCTTGTGCTGCGCGGCACAGGAATTTCCATGAACCAGACCGCCCACTATATGGAAATTGCAAGCTTCGCGCTT GTGCTGTTTTTCGGCCTCTGGCTTCTGGTGCGAAAACTGCCGCAGCTTTTTAGAAAGCGCGACCATGCAGGCGCCGGGCC TGCCTCACCGCTTTTCGCAGCCGCACCGCAACCTGCCATCGTATCCGGCCCGGCATGGCAGGGGAGTATTTCGCAAGCCA CCCGCACGGCTGCAACCAGCAGCACGGTCAAGCTCAACTACAAGCCCGCCACCGCCGCAACCGATCACATCTTCATCGGA GAAGGCGACGTATGTGCCGCCTGTGGCAATGCCCATATTGTCGACCCATCGACACTTGGCGATGACTTCAACTGGAAGAC GGCATGGTCGGCGATTTTTTCCGTGGGCCTGCGCCCCTGCTCCGGCGCGCTGATCGTACTGACTTTCGCGCCGTTGAACG GCCTGATGGTGGGGGGGCTGCTCTCGGTCTTTGCCATGGCGCTTGGCACGTTCATCACCGTAGCCGTTCTCGCCACCTTG GCCGTAACCGCAAAGAACACGGCCCTGCGCTTTGCGGGCAGCAAGGCCATGTCGGGCCGGCTAAAGGCGGCAATCGAAGT CTGCGCCGCCCTTTTCATCACGCTGACAGGTGCACTTTTGCTCAGTGCTGCGCTGGTGAAGTGA
Upstream 100 bases:
>100_bases TGACCGATGCCTTTTTCAACGATCCGACGGGCACGGACATGTCGAAGATTTTCGCCACCCGCCTTGAGATCGATTGCGCA GCGAAAGGAAAGACTGGCTG
Downstream 100 bases:
>100_bases GGATAATTTCACCTATCCTAGGTTTGTAAGCTTATTAACGAAAATTTTCTATTTGCATAAATTACCAATATGCATGAAGT CACTTCCATTGACATGAACA
Product: high-affinity nickel-transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MRRTAGSMIALCLTMIVAQAYAQSSLGIGANEVAMKPTGPFAHIIQWMNEQQRSFYLAMTTALKAMREDPLQAAWGLVGL SFIYGIFHAVGPGHGKAVISSYMIANETALRRGIFLSFISSLLQAIMAVAVVGLAWLVLRGTGISMNQTAHYMEIASFAL VLFFGLWLLVRKLPQLFRKRDHAGAGPASPLFAAAPQPAIVSGPAWQGSISQATRTAATSSTVKLNYKPATAATDHIFIG EGDVCAACGNAHIVDPSTLGDDFNWKTAWSAIFSVGLRPCSGALIVLTFAPLNGLMVGGLLSVFAMALGTFITVAVLATL AVTAKNTALRFAGSKAMSGRLKAAIEVCAALFITLTGALLLSAALVK
Sequences:
>Translated_367_residues MRRTAGSMIALCLTMIVAQAYAQSSLGIGANEVAMKPTGPFAHIIQWMNEQQRSFYLAMTTALKAMREDPLQAAWGLVGL SFIYGIFHAVGPGHGKAVISSYMIANETALRRGIFLSFISSLLQAIMAVAVVGLAWLVLRGTGISMNQTAHYMEIASFAL VLFFGLWLLVRKLPQLFRKRDHAGAGPASPLFAAAPQPAIVSGPAWQGSISQATRTAATSSTVKLNYKPATAATDHIFIG EGDVCAACGNAHIVDPSTLGDDFNWKTAWSAIFSVGLRPCSGALIVLTFAPLNGLMVGGLLSVFAMALGTFITVAVLATL AVTAKNTALRFAGSKAMSGRLKAAIEVCAALFITLTGALLLSAALVK >Mature_367_residues MRRTAGSMIALCLTMIVAQAYAQSSLGIGANEVAMKPTGPFAHIIQWMNEQQRSFYLAMTTALKAMREDPLQAAWGLVGL SFIYGIFHAVGPGHGKAVISSYMIANETALRRGIFLSFISSLLQAIMAVAVVGLAWLVLRGTGISMNQTAHYMEIASFAL VLFFGLWLLVRKLPQLFRKRDHAGAGPASPLFAAAPQPAIVSGPAWQGSISQATRTAATSSTVKLNYKPATAATDHIFIG EGDVCAACGNAHIVDPSTLGDDFNWKTAWSAIFSVGLRPCSGALIVLTFAPLNGLMVGGLLSVFAMALGTFITVAVLATL AVTAKNTALRFAGSKAMSGRLKAAIEVCAALFITLTGALLLSAALVK
Specific function: Efflux system for nickel and cobalt (Potential) [H]
COG id: COG2215
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011541 [H]
Pfam domain/function: PF03824 NicO [H]
EC number: NA
Molecular weight: Translated: 38581; Mature: 38581
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTAGSMIALCLTMIVAQAYAQSSLGIGANEVAMKPTGPFAHIIQWMNEQQRSFYLAMT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH TALKAMREDPLQAAWGLVGLSFIYGIFHAVGPGHGKAVISSYMIANETALRRGIFLSFIS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLLQAIMAVAVVGLAWLVLRGTGISMNQTAHYMEIASFALVLFFGLWLLVRKLPQLFRKR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DHAGAGPASPLFAAAPQPAIVSGPAWQGSISQATRTAATSSTVKLNYKPATAATDHIFIG CCCCCCCCCCCHHCCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEC EGDVCAACGNAHIVDPSTLGDDFNWKTAWSAIFSVGLRPCSGALIVLTFAPLNGLMVGGL CCCEEEECCCCEEECCHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH LSVFAMALGTFITVAVLATLAVTAKNTALRFAGSKAMSGRLKAAIEVCAALFITLTGALL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSAALVK HHHHHCC >Mature Secondary Structure MRRTAGSMIALCLTMIVAQAYAQSSLGIGANEVAMKPTGPFAHIIQWMNEQQRSFYLAMT CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH TALKAMREDPLQAAWGLVGLSFIYGIFHAVGPGHGKAVISSYMIANETALRRGIFLSFIS HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLLQAIMAVAVVGLAWLVLRGTGISMNQTAHYMEIASFALVLFFGLWLLVRKLPQLFRKR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DHAGAGPASPLFAAAPQPAIVSGPAWQGSISQATRTAATSSTVKLNYKPATAATDHIFIG CCCCCCCCCCCHHCCCCCCEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEC EGDVCAACGNAHIVDPSTLGDDFNWKTAWSAIFSVGLRPCSGALIVLTFAPLNGLMVGGL CCCEEEECCCCEEECCHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH LSVFAMALGTFITVAVLATLAVTAKNTALRFAGSKAMSGRLKAAIEVCAALFITLTGALL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSAALVK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]