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The map label for this gene is 225685890

Identifier: 225685890

GI number: 225685890

Start: 19138

End: 19788

Strand: Direct

Name: 225685890

Synonym: BMEA_B0024

Alternate gene names: NA

Gene position: 19138-19788 (Clockwise)

Preceding gene: 225685889

Following gene: 225685892

Centisome position: 1.61

GC content: 63.13

Gene sequence:

>651_bases
TTGGAGGCAAGAAAGATAACCGATGACCTGATCAACCGCCTGACGGGCGAGCTGAAGCCGGTGTCGCGCCATGCCATGCA
GAGGCTGCTATTGGGACATGCGCTTTTGGGCATGGTTGCGGGCGTGGTCATCATGCTGGCTTTTCTGGGCGCCCGCCACG
ATCTTGCCGCCGCAATGGCGACCCCCGCCTTCTGGAGCAAGCTTTGCTATGCCGCGCTGTTGCTTGCCGTCCTGCTTCCT
GCCTTGTTCGCGCTGTCGCGGCCTTTGCGGCAAAACCTGCCCTGGCCTGCGCTGCTGCTCATTTTTTCCTGCCTTGGTGC
GGCGGCTATCTATCAATGGGAGGAAGCCTCGCCTGAGGTGAGGCCGGTGCTGGTATGGGGATATACGGCGCTCGTCTGCC
CCTGGCTGATCGGGCTTATCTCGCTGCCGACACTTGCTTCGCTTCTGCTGGCGATCCGCAAGCTTGCGCCCGCGCGCCCA
ACGCTTGCCGGTTTCGCGGCAGGGCTGGTGTCGGGCGGCATCGGCGTTCTGGTCTATGCCTTCCATTGCCCGGAATCCGG
CCTGCCATTCATTGCGCTGTGGTACACGCTGGGCATTGTGGGAACAGGCGTGCTGGGTGCGCTTGGCGGGCGCTTCTGCC
TGCGCTGGTAA

Upstream 100 bases:

>100_bases
GAGGGACAATCGATTGACGAGGCCGCGCGGGCGGGCGACATGAGCCAGAGCGCGGTCAAGGTGGCGATCCATCGCGGCCT
TGCCACGCTGGCGCAGCGGT

Downstream 100 bases:

>100_bases
TCGCGGGGAAGAAGCGCGGATCAACCGGCCTGACGGGTTTTGCTATCAGTTGGTCCGGTTATCGGCTGAAAGATAGACTT
TCATGCGCTGCGTGGCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: Extracytoplasmic Function AlteRNAtive Sigma Factor; ECF-Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MEARKITDDLINRLTGELKPVSRHAMQRLLLGHALLGMVAGVVIMLAFLGARHDLAAAMATPAFWSKLCYAALLLAVLLP
ALFALSRPLRQNLPWPALLLIFSCLGAAAIYQWEEASPEVRPVLVWGYTALVCPWLIGLISLPTLASLLLAIRKLAPARP
TLAGFAAGLVSGGIGVLVYAFHCPESGLPFIALWYTLGIVGTGVLGALGGRFCLRW

Sequences:

>Translated_216_residues
MEARKITDDLINRLTGELKPVSRHAMQRLLLGHALLGMVAGVVIMLAFLGARHDLAAAMATPAFWSKLCYAALLLAVLLP
ALFALSRPLRQNLPWPALLLIFSCLGAAAIYQWEEASPEVRPVLVWGYTALVCPWLIGLISLPTLASLLLAIRKLAPARP
TLAGFAAGLVSGGIGVLVYAFHCPESGLPFIALWYTLGIVGTGVLGALGGRFCLRW
>Mature_216_residues
MEARKITDDLINRLTGELKPVSRHAMQRLLLGHALLGMVAGVVIMLAFLGARHDLAAAMATPAFWSKLCYAALLLAVLLP
ALFALSRPLRQNLPWPALLLIFSCLGAAAIYQWEEASPEVRPVLVWGYTALVCPWLIGLISLPTLASLLLAIRKLAPARP
TLAGFAAGLVSGGIGVLVYAFHCPESGLPFIALWYTLGIVGTGVLGALGGRFCLRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23134; Mature: 23134

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEARKITDDLINRLTGELKPVSRHAMQRLLLGHALLGMVAGVVIMLAFLGARHDLAAAMA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TPAFWSKLCYAALLLAVLLPALFALSRPLRQNLPWPALLLIFSCLGAAAIYQWEEASPEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
RPVLVWGYTALVCPWLIGLISLPTLASLLLAIRKLAPARPTLAGFAAGLVSGGIGVLVYA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
FHCPESGLPFIALWYTLGIVGTGVLGALGGRFCLRW
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MEARKITDDLINRLTGELKPVSRHAMQRLLLGHALLGMVAGVVIMLAFLGARHDLAAAMA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TPAFWSKLCYAALLLAVLLPALFALSRPLRQNLPWPALLLIFSCLGAAAIYQWEEASPEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
RPVLVWGYTALVCPWLIGLISLPTLASLLLAIRKLAPARPTLAGFAAGLVSGGIGVLVYA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHH
FHCPESGLPFIALWYTLGIVGTGVLGALGGRFCLRW
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA