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The map label for this gene is exoF [H]

Identifier: 225852298

GI number: 225852298

Start: 787142

End: 787729

Strand: Reverse

Name: exoF [H]

Synonym: BMEA_A0822

Alternate gene names: 225852298

Gene position: 787729-787142 (Counterclockwise)

Preceding gene: 225852300

Following gene: 225852297

Centisome position: 37.06

GC content: 53.4

Gene sequence:

>588_bases
ATGGCGACAACAATCCAAAGTAAGCGCAAAAGCCATATAATATTTCTGGCTCTCGGTTTTGCCGCAATGACACTTGCCGG
ATGCGCAAGCTATCGTCCGGCTCCACCTGCATTCCACGAAGCACTGAACCAGCCCTATCTGCTCGATGCAGGCGATCGTG
TTCGCATTACGGTATTTGAACAGCCAAGCCTAAGCAATAATTACAGTGTCGATCAATCCGGCTATATCGCCTTTCCTCTG
ATCGGCAGCGTACCTGCGCGCGGAAAAACCTCCAAACAGTTGGAAAGCATCATCGCTTCCAAACTGCGCGGCGGCTATCT
GCGCGACCCGGATGTCAGCGTTGAGGTTGATCGTTATCGTCCGATCTTCGTGATGGGTGAAGTTGGCGCAGCCGGTCAAT
ATTCCTATGTGCCCGGCATGACCGTTCAGAAGGCAATTGCCGCAGCCGGCGGTTTCAGCCCCCGCGCCAATCAGGAAAAT
GTTGATATTACCCGCCAGTTCAACGGGGAGGTTCTTACAGGCCGTGTCTTGATTTCTTCGCCCATATTGCCGGGCGACAC
GCTTTATGTGCGCGAGCGTCTTTTCTAG

Upstream 100 bases:

>100_bases
TGACAACTGATATTCGCATTCAGGGGCAATTGCCGGTTCTGATTGCAACATCGAGACGCAATGCAGGCTGTAGCGACCGG
AAAATACCGAGATCAATATG

Downstream 100 bases:

>100_bases
AGCGGTTGATGGAAGACATAACTTCCCTTCTGCGTACCATCAGGAGATTGCAGCCGGACATTTTCCATGAACGCGCCTTC
CGCGCCAGTCCGTTCGGCTC

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MATTIQSKRKSHIIFLALGFAAMTLAGCASYRPAPPAFHEALNQPYLLDAGDRVRITVFEQPSLSNNYSVDQSGYIAFPL
IGSVPARGKTSKQLESIIASKLRGGYLRDPDVSVEVDRYRPIFVMGEVGAAGQYSYVPGMTVQKAIAAAGGFSPRANQEN
VDITRQFNGEVLTGRVLISSPILPGDTLYVRERLF

Sequences:

>Translated_195_residues
MATTIQSKRKSHIIFLALGFAAMTLAGCASYRPAPPAFHEALNQPYLLDAGDRVRITVFEQPSLSNNYSVDQSGYIAFPL
IGSVPARGKTSKQLESIIASKLRGGYLRDPDVSVEVDRYRPIFVMGEVGAAGQYSYVPGMTVQKAIAAAGGFSPRANQEN
VDITRQFNGEVLTGRVLISSPILPGDTLYVRERLF
>Mature_194_residues
ATTIQSKRKSHIIFLALGFAAMTLAGCASYRPAPPAFHEALNQPYLLDAGDRVRITVFEQPSLSNNYSVDQSGYIAFPLI
GSVPARGKTSKQLESIIASKLRGGYLRDPDVSVEVDRYRPIFVMGEVGAAGQYSYVPGMTVQKAIAAAGGFSPRANQENV
DITRQFNGEVLTGRVLISSPILPGDTLYVRERLF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788376, Length=182, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 21187; Mature: 21055

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTIQSKRKSHIIFLALGFAAMTLAGCASYRPAPPAFHEALNQPYLLDAGDRVRITVFE
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCEEEEEEEE
QPSLSNNYSVDQSGYIAFPLIGSVPARGKTSKQLESIIASKLRGGYLRDPDVSVEVDRYR
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
PIFVMGEVGAAGQYSYVPGMTVQKAIAAAGGFSPRANQENVDITRQFNGEVLTGRVLISS
CEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEEEEC
PILPGDTLYVRERLF
CCCCCCCEEHEECCC
>Mature Secondary Structure 
ATTIQSKRKSHIIFLALGFAAMTLAGCASYRPAPPAFHEALNQPYLLDAGDRVRITVFE
CCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCEEEEEEEE
QPSLSNNYSVDQSGYIAFPLIGSVPARGKTSKQLESIIASKLRGGYLRDPDVSVEVDRYR
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
PIFVMGEVGAAGQYSYVPGMTVQKAIAAAGGFSPRANQENVDITRQFNGEVLTGRVLISS
CEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEEEEC
PILPGDTLYVRERLF
CCCCCCCEEHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]