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The map label for this gene is yxkH [H]

Identifier: 225851866

GI number: 225851866

Start: 354030

End: 354731

Strand: Reverse

Name: yxkH [H]

Synonym: BMEA_A0358

Alternate gene names: 225851866

Gene position: 354731-354030 (Counterclockwise)

Preceding gene: 225851867

Following gene: 225851865

Centisome position: 16.69

GC content: 57.26

Gene sequence:

>702_bases
ATGCCTGTACCTATTCTTTTGTATCACCAGATCGCGCCATTACCGGCCAAAAACATTCCATTCCGCGGCTTGCTGGTTCA
TCCTGACCGCTTCCGCAGCCAGATGCGCTGGCTGAAGAGGCTCGGCTATCAAGGTCTCTCGCTGCGCGATGCCATGCCAT
ATATCAAGGGTGAAAAGACCGGAAAAGTGGCCGTCATCACCTTTGATGACGGTTATCTCAATGTGCTGGAGAATGCCGGA
CCTGTTCTTGCCGAATACGGTTTTACGGCCACCAATTATTTTGTGGCCAACCAGGTTGGCGGCAGCAATGTCTGGGATCA
GCCCATCGGCGTGCCGAAGACGCCCTGCATGTCGGTGGCACAACTACGTGAATGGGCGGATCTCGGTCATGAGGTCGGCG
CCCATACCCTCGATCATGTTGCCCTGAGCAAAGTGCCCGAAGACGAGGCGCGCCGCCAGATCGCCCAGTCGAAAACGGTG
CTGGAAGATATGCTCGGTACGCAGGTGACAAATTTTTGTTACCCTTATGGCGACAATACCCCAATCCACCGCGAGATGGT
GCGGGAAGCAGGCTATGAAACCGCAACAACGACGGTGCGGGCGCGGGCAAGGCCAACAGACGATCCGTTCGGCATTCCGC
GCATCTATGTGCGCCGGCGCGACCTGTGGCCCAAATTCGTGGTCCGGCTTCGCGTGCGCTAG

Upstream 100 bases:

>100_bases
TCCAGCACAAAAAGAACTTTTCAGACAAGCTTGCGCGCGAAATTTTACGCCCCATCTACCGGATGCGTGTGCGCGCCTAT
TCATCGAAATGAGTTTTATG

Downstream 100 bases:

>100_bases
GATTTCCATAAATCCCGACAAACGAACTGCCAGTTGATTGATCTAGCTCAATGCTCCTTCAAGCAAACGTGGCAAATTGC
CCGACCATGGGCTATGGACG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MPVPILLYHQIAPLPAKNIPFRGLLVHPDRFRSQMRWLKRLGYQGLSLRDAMPYIKGEKTGKVAVITFDDGYLNVLENAG
PVLAEYGFTATNYFVANQVGGSNVWDQPIGVPKTPCMSVAQLREWADLGHEVGAHTLDHVALSKVPEDEARRQIAQSKTV
LEDMLGTQVTNFCYPYGDNTPIHREMVREAGYETATTTVRARARPTDDPFGIPRIYVRRRDLWPKFVVRLRVR

Sequences:

>Translated_233_residues
MPVPILLYHQIAPLPAKNIPFRGLLVHPDRFRSQMRWLKRLGYQGLSLRDAMPYIKGEKTGKVAVITFDDGYLNVLENAG
PVLAEYGFTATNYFVANQVGGSNVWDQPIGVPKTPCMSVAQLREWADLGHEVGAHTLDHVALSKVPEDEARRQIAQSKTV
LEDMLGTQVTNFCYPYGDNTPIHREMVREAGYETATTTVRARARPTDDPFGIPRIYVRRRDLWPKFVVRLRVR
>Mature_232_residues
PVPILLYHQIAPLPAKNIPFRGLLVHPDRFRSQMRWLKRLGYQGLSLRDAMPYIKGEKTGKVAVITFDDGYLNVLENAGP
VLAEYGFTATNYFVANQVGGSNVWDQPIGVPKTPCMSVAQLREWADLGHEVGAHTLDHVALSKVPEDEARRQIAQSKTVL
EDMLGTQVTNFCYPYGDNTPIHREMVREAGYETATTTVRARARPTDDPFGIPRIYVRRRDLWPKFVVRLRVR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=233, Percent_Identity=29.6137339055794, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 26417; Mature: 26286

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPILLYHQIAPLPAKNIPFRGLLVHPDRFRSQMRWLKRLGYQGLSLRDAMPYIKGEKT
CCCCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
GKVAVITFDDGYLNVLENAGPVLAEYGFTATNYFVANQVGGSNVWDQPIGVPKTPCMSVA
CCEEEEEECCCHHHHHHCCCCHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHH
QLREWADLGHEVGAHTLDHVALSKVPEDEARRQIAQSKTVLEDMLGTQVTNFCYPYGDNT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
PIHREMVREAGYETATTTVRARARPTDDPFGIPRIYVRRRDLWPKFVVRLRVR
CHHHHHHHHCCCCHHHHEEEECCCCCCCCCCCCHHEEEHHCCCHHHHHEECCC
>Mature Secondary Structure 
PVPILLYHQIAPLPAKNIPFRGLLVHPDRFRSQMRWLKRLGYQGLSLRDAMPYIKGEKT
CCCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC
GKVAVITFDDGYLNVLENAGPVLAEYGFTATNYFVANQVGGSNVWDQPIGVPKTPCMSVA
CCEEEEEECCCHHHHHHCCCCHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCHHHHHH
QLREWADLGHEVGAHTLDHVALSKVPEDEARRQIAQSKTVLEDMLGTQVTNFCYPYGDNT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
PIHREMVREAGYETATTTVRARARPTDDPFGIPRIYVRRRDLWPKFVVRLRVR
CHHHHHHHHCCCCHHHHEEEECCCCCCCCCCCCHHEEEHHCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]