Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
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Accession | NC_012441 |
Length | 2,125,701 |
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The map label for this gene is gdhA [H]
Identifier: 225851754
GI number: 225851754
Start: 238589
End: 239854
Strand: Reverse
Name: gdhA [H]
Synonym: BMEA_A0235
Alternate gene names: 225851754
Gene position: 239854-238589 (Counterclockwise)
Preceding gene: 225851760
Following gene: 225851753
Centisome position: 11.28
GC content: 60.9
Gene sequence:
>1266_bases GTGACCACGGAAAATCTGCTCGAAAGTGCACTCGTCCGGCTGGACGAAGCGGCAAGCCACATAAACATCGATGCGGATGT CATCGAAAAGCTGAAGTTTGCGCGTGAGACCATGAAAGTGCGGTTGATGATCCGCATGGACGACGGTTCGCGCAAGTCCT TTATTGCGTGGCGCTGCCGCTATGACGACACTCGCGGACCGACCAAGGGCGGCATCCGCTACCATCCCGATTCAACGGTG GAAGAAGTCGAGACGCCCGCCTTCTGGATGACCTTCAAATGCGCCGTGATGAACCTGCCTTATGGCGGCGGCAAGGGCGC GATCCAGGTCGATCCGCGCCAGCTCTCCAAGGCTGAACTGGAGCGCCTTTCGCGCGCCTATATCCAGGCTTTCTCCGGCA TCATCGGCCCGGACCGCGACATTCCGGCCCCGGACGTCTATACGAATTCCATGATCATGGGCTGGATGGCTGACGAATAC TCCCAGATCGTCGGCCAGTCCTCTCCCGCCGTCATTACCGGCAAGCCCATCGCACTTGGTGGCTCGCTCGGACGCAATGA CGCGACCGCACGCGGCGGCTTCTACCTCGTTCGCCACCTCTCGCACGATCTGGGCCTCGCTTCGGTTCTGCGCGTCGCCA TCCAGGGTTTTGGCAATGCCGGACAGTTCATGGCCAAGCTGATGGCGGGCGACGGCCACAAGATCGTCGCCGTGTCGGAT TCCGCAGGGGCGGTCTATTGCGCGGATGGCCTTGACGTCGACCTGCTTCTGGCCGCCAAGGCTGATGGCAAGTCCGTCAT TTCAACCGCCGGTCACAAGGGCCACGAGGCGATCAGCGCCGACGAACTCGTCGCCGCCGATTGTGACGTGCTGGTGCCAA GCGCCATGGAAAACATGATCCATGCCGGTAATGCAGCTTCCATTCGCGCCAAGCTTATCGTGGAACTGGCCAACGGCCCG GTCACGGGGGACGCTGACAAGATCCTCGCCGAAAAGGGCGTGATGGTCCTGCCGGACATTCTTGCCAATGCTGGCGGCGT GACGGTTTCCTATTTTGAATGGGTGCAGAACCGTCAGGGTTATTACTGGACGCTTGAAGAAATCCATGAACGCCTGAAGA CGATCATGGAACGCGAAGGCCGCGCCATCTGGAACCATGCCCGCGAACGCGGTGTGACCCTGCGCACGGCTGCCTATGTG CATGCGCTGGAGCGCCTTGCACAAGCGATCGAGGCCCACGGCACGCAAAACGACTTCGCGGCCTGA
Upstream 100 bases:
>100_bases ACACTATTGTCCTTTTTGCTTTCCTTTTGTTGCGCAAAGGCGTAGTCAGAAATACGCAAAATCGCATTTTTAAAAACATA CACGCAAGAAAGGTGATTTC
Downstream 100 bases:
>100_bases TTCACTCTACGAACGTTACCCTCCTGTCGGATTACCGGCGGGAGGGGACAAAAAGCGGTTTCTTTTTCCGCCCGCACGAC AATCTTGAGCTGCTGGCGCC
Product: glutamate dehydrogenase
Products: NA
Alternate protein names: NADP-GDH [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTTENLLESALVRLDEAASHINIDADVIEKLKFARETMKVRLMIRMDDGSRKSFIAWRCRYDDTRGPTKGGIRYHPDSTV EEVETPAFWMTFKCAVMNLPYGGGKGAIQVDPRQLSKAELERLSRAYIQAFSGIIGPDRDIPAPDVYTNSMIMGWMADEY SQIVGQSSPAVITGKPIALGGSLGRNDATARGGFYLVRHLSHDLGLASVLRVAIQGFGNAGQFMAKLMAGDGHKIVAVSD SAGAVYCADGLDVDLLLAAKADGKSVISTAGHKGHEAISADELVAADCDVLVPSAMENMIHAGNAASIRAKLIVELANGP VTGDADKILAEKGVMVLPDILANAGGVTVSYFEWVQNRQGYYWTLEEIHERLKTIMEREGRAIWNHARERGVTLRTAAYV HALERLAQAIEAHGTQNDFAA
Sequences:
>Translated_421_residues MTTENLLESALVRLDEAASHINIDADVIEKLKFARETMKVRLMIRMDDGSRKSFIAWRCRYDDTRGPTKGGIRYHPDSTV EEVETPAFWMTFKCAVMNLPYGGGKGAIQVDPRQLSKAELERLSRAYIQAFSGIIGPDRDIPAPDVYTNSMIMGWMADEY SQIVGQSSPAVITGKPIALGGSLGRNDATARGGFYLVRHLSHDLGLASVLRVAIQGFGNAGQFMAKLMAGDGHKIVAVSD SAGAVYCADGLDVDLLLAAKADGKSVISTAGHKGHEAISADELVAADCDVLVPSAMENMIHAGNAASIRAKLIVELANGP VTGDADKILAEKGVMVLPDILANAGGVTVSYFEWVQNRQGYYWTLEEIHERLKTIMEREGRAIWNHARERGVTLRTAAYV HALERLAQAIEAHGTQNDFAA >Mature_420_residues TTENLLESALVRLDEAASHINIDADVIEKLKFARETMKVRLMIRMDDGSRKSFIAWRCRYDDTRGPTKGGIRYHPDSTVE EVETPAFWMTFKCAVMNLPYGGGKGAIQVDPRQLSKAELERLSRAYIQAFSGIIGPDRDIPAPDVYTNSMIMGWMADEYS QIVGQSSPAVITGKPIALGGSLGRNDATARGGFYLVRHLSHDLGLASVLRVAIQGFGNAGQFMAKLMAGDGHKIVAVSDS AGAVYCADGLDVDLLLAAKADGKSVISTAGHKGHEAISADELVAADCDVLVPSAMENMIHAGNAASIRAKLIVELANGPV TGDADKILAEKGVMVLPDILANAGGVTVSYFEWVQNRQGYYWTLEEIHERLKTIMEREGRAIWNHARERGVTLRTAAYVH ALERLAQAIEAHGTQNDFAA
Specific function: Unknown
COG id: COG0334
COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]
Homologues:
Organism=Homo sapiens, GI4885281, Length=454, Percent_Identity=34.1409691629956, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI31377775, Length=454, Percent_Identity=33.7004405286344, Blast_Score=255, Evalue=6e-68, Organism=Escherichia coli, GI1788059, Length=360, Percent_Identity=30.2777777777778, Blast_Score=158, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17544676, Length=476, Percent_Identity=32.7731092436975, Blast_Score=247, Evalue=7e-66, Organism=Saccharomyces cerevisiae, GI6319256, Length=413, Percent_Identity=28.3292978208232, Blast_Score=126, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6324951, Length=366, Percent_Identity=28.1420765027322, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI45553475, Length=435, Percent_Identity=32.183908045977, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI45549226, Length=448, Percent_Identity=30.8035714285714, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI24649283, Length=480, Percent_Identity=32.0833333333333, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24649460, Length=396, Percent_Identity=31.3131313131313, Blast_Score=206, Evalue=2e-53,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006095 - InterPro: IPR006096 - InterPro: IPR006097 - InterPro: IPR014362 - InterPro: IPR016040 [H]
Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]
EC number: =1.4.1.4 [H]
Molecular weight: Translated: 45614; Mature: 45482
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTENLLESALVRLDEAASHINIDADVIEKLKFARETMKVRLMIRMDDGSRKSFIAWRCR CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCCCEEEEEEE YDDTRGPTKGGIRYHPDSTVEEVETPAFWMTFKCAVMNLPYGGGKGAIQVDPRQLSKAEL CCCCCCCCCCCEEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCCCCEEECHHHHHHHHH ERLSRAYIQAFSGIIGPDRDIPAPDVYTNSMIMGWMADEYSQIVGQSSPAVITGKPIALG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEECCCEEEC GSLGRNDATARGGFYLVRHLSHDLGLASVLRVAIQGFGNAGQFMAKLMAGDGHKIVAVSD CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEC SAGAVYCADGLDVDLLLAAKADGKSVISTAGHKGHEAISADELVAADCDVLVPSAMENMI CCCEEEEECCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHCCCCEECHHHHHHHH HAGNAASIRAKLIVELANGPVTGDADKILAEKGVMVLPDILANAGGVTVSYFEWVQNRQG HCCCCHHEEEEEEEEECCCCCCCCHHHHHHHCCCEEEHHHHCCCCCCCHHHHHHHHCCCC YYWTLEEIHERLKTIMEREGRAIWNHARERGVTLRTAAYVHALERLAQAIEAHGTQNDFA EEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC A C >Mature Secondary Structure TTENLLESALVRLDEAASHINIDADVIEKLKFARETMKVRLMIRMDDGSRKSFIAWRCR CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCCCEEEEEEE YDDTRGPTKGGIRYHPDSTVEEVETPAFWMTFKCAVMNLPYGGGKGAIQVDPRQLSKAEL CCCCCCCCCCCEEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCCCCEEECHHHHHHHHH ERLSRAYIQAFSGIIGPDRDIPAPDVYTNSMIMGWMADEYSQIVGQSSPAVITGKPIALG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEECCCEEEC GSLGRNDATARGGFYLVRHLSHDLGLASVLRVAIQGFGNAGQFMAKLMAGDGHKIVAVSD CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEC SAGAVYCADGLDVDLLLAAKADGKSVISTAGHKGHEAISADELVAADCDVLVPSAMENMI CCCEEEEECCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHCCCCEECHHHHHHHH HAGNAASIRAKLIVELANGPVTGDADKILAEKGVMVLPDILANAGGVTVSYFEWVQNRQG HCCCCHHEEEEEEEEECCCCCCCCHHHHHHHCCCEEEHHHHCCCCCCCHHHHHHHHCCCC YYWTLEEIHERLKTIMEREGRAIWNHARERGVTLRTAAYVHALERLAQAIEAHGTQNDFA EEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7787182; 8590279; 8905231 [H]