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The map label for this gene is osmF [H]

Identifier: 225851752

GI number: 225851752

Start: 236535

End: 237602

Strand: Reverse

Name: osmF [H]

Synonym: BMEA_A0233

Alternate gene names: 225851752

Gene position: 237602-236535 (Counterclockwise)

Preceding gene: 225851753

Following gene: 225851751

Centisome position: 11.18

GC content: 55.9

Gene sequence:

>1068_bases
ATGAGTGGAACTCATCGGGCTTTGGTATTATCCCTCCTGCCAGCCCACTGTCAGGAAGGGGGCAAAAGGCGGTTTCCTTT
TTCTGCCCGCGCTATAGTTTATCTCCACAGGGAAAAAACAGCGTGTGGGATGAAGAGCATGTCGTATAGAAACTTGTTGA
AGGGAAGTGCCTTTGCACTTGCCCTTTTTGTGGGCGCGATCCAGTTTTCCAGCCTCGCCGAGGCACAGGTCGCCGTTTCA
TCCAAGATCGACACCGAAGGCGGCGTGCTCGGCAATATCATCCTGACCGTTCTCAATGCCAACGGCATCAAAACGACCGA
CCGCATCCAGCTTGGCGCGACACCGGTGGTGCGCAAAGCGATCACGGCAGGCGAGATCGACATCTATCCCGAATATACCG
GTAATGCGGCCTTCTTCTTCAACAAGGCCGACGATCCACTCTGGAAAGACCCGGCCAAGGCTTACGAAACAGCCAAAAAG
CTTGATTACGACGCCAACAAGATCGTGTGGCTGACGCCCTCTCCCGCCAACAACACATGGGGCATCGCGGTGCGCAAGGA
TGTGGCCAATGAAAACAAGCTCGCAAGCCTCAGCGATTTCGGCAAATATATTGCAGGCGGCGGCAAGGTGGTTCTGGCGG
CATCCTCCGAATTCGTGAATTCGGCGGCAGCACTGCCCGCTTTCCAGACCGCCTATGGCTTTACCCTGAAACCCGATCAG
CTCATCACGCTTTCAGGCGGCGATACGGCGGCAACAATTGCAGCCGCAGCCAACCAGACCAATGGCGCCAATGCGGCCAT
GGTCTATGGCACCGATGGCGGCATCGCACCATCCGGGCTTGTCGTGCTGGAAGACGACAAGCATGTGCAGCCGGTCTATC
AGCCCGCACCGATCATCCGCGAGGAGGTTCTGAAAAAGGACCCGAAGATCGAGGAACTTCTGAAACCCGTTTTCGAGAAA
CTCGACCTCACCACCTTGCAGGATCTGAACGGCCGCGTACAGCTTGGCGGCGAACCGGCAAAGGCGGTAGCGGAAGATTT
TCTGAAGAAAAACGGCTTTTTGAAATAG

Upstream 100 bases:

>100_bases
CAAGCTTGCAAGTCTATGGACAGCCGTTCGAGCATGTCGATACGAGCACGCTTGAAAAAGTAAAATAACGATCAAAATAA
GCATGTGATGTTCAAGCCCG

Downstream 100 bases:

>100_bases
ACCTGATAAGGCAGCAAGCCCTTGCCGGAGACCATAGCAACACAGGAACGGCGCCCGGTCTTGCCAAACGGTGTGGGACA
CATCGCAGGCCGGATCGACA

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSGTHRALVLSLLPAHCQEGGKRRFPFSARAIVYLHREKTACGMKSMSYRNLLKGSAFALALFVGAIQFSSLAEAQVAVS
SKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKAITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKK
LDYDANKIVWLTPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTAYGFTLKPDQ
LITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQPAPIIREEVLKKDPKIEELLKPVFEK
LDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK

Sequences:

>Translated_355_residues
MSGTHRALVLSLLPAHCQEGGKRRFPFSARAIVYLHREKTACGMKSMSYRNLLKGSAFALALFVGAIQFSSLAEAQVAVS
SKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKAITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKK
LDYDANKIVWLTPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTAYGFTLKPDQ
LITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQPAPIIREEVLKKDPKIEELLKPVFEK
LDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK
>Mature_354_residues
SGTHRALVLSLLPAHCQEGGKRRFPFSARAIVYLHREKTACGMKSMSYRNLLKGSAFALALFVGAIQFSSLAEAQVAVSS
KIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKAITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKKL
DYDANKIVWLTPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTAYGFTLKPDQL
ITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQPAPIIREEVLKKDPKIEELLKPVFEKL
DLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=309, Percent_Identity=55.3398058252427, Blast_Score=343, Evalue=1e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 37873; Mature: 37742

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTHRALVLSLLPAHCQEGGKRRFPFSARAIVYLHREKTACGMKSMSYRNLLKGSAFAL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHH
ALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHEEEECCCCCCCCCEEEECCCHHHHHH
ITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWLTPSPANNTW
HCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
GIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTAYGFTLKPDQ
EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCHHHHCCCEECCCC
LITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQPAPIIR
EEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHH
EEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK
HHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGTHRALVLSLLPAHCQEGGKRRFPFSARAIVYLHREKTACGMKSMSYRNLLKGSAFAL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHH
ALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHEEEECCCCCCCCCEEEECCCHHHHHH
ITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWLTPSPANNTW
HCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
GIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTAYGFTLKPDQ
EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCHHHHCCCEECCCC
LITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQPVYQPAPIIR
EEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHH
EEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK
HHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]