Definition | Wolbachia sp. wRi, complete genome. |
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Accession | NC_012416 |
Length | 1,445,873 |
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The map label for this gene is 225630432
Identifier: 225630432
GI number: 225630432
Start: 728237
End: 729607
Strand: Reverse
Name: 225630432
Synonym: WRi_006720
Alternate gene names: NA
Gene position: 729607-728237 (Counterclockwise)
Preceding gene: 225630436
Following gene: 225630431
Centisome position: 50.46
GC content: 36.4
Gene sequence:
>1371_bases ATGCCAAAAAAGATGGAGCGTCATGCTGCAGTGCTTAGTAAGTTAAAGAGTGTTATTCAACATACAGATTCCAAGGTCAT GGCTGAAAGGCGTTCAGCTATTGAAAGATGGGTAAAAACTTACATTAGGCAGGTAGAATATCTTAAAGATGATAAGCTAC AATTCTTATACAACATATTTCGCGATGAAAGTTGTTGGTCAGGTACGAGATTGAACAATACAATCTTAGGACAGAGGTTT ACTGAAGAAAAAATAGGCGAAATAAAGAACCCTCTTCCTATATATGATATGGCATGTCGATACTGCGTGATAGATAAAAT TCCTTTGCTCTTTCAGAAGCAGTTTGAATCTTACAAAAGTAGCTTCTCTTCTGAAGAGATAGATGATGATGGTAAGCCTG CAACTAGCAATAACAAATATGTAAAGAGTGAGTTGTTGGGTTATATGAAGAGTCAAGACCCTGTATTTAGCTTTTGGGTT GATAAAAAATCTGGAGAATTTAAGAAGCATGTCAGCGCAACAGAAGGATTTAAGAAAGCTATAGAACTTAAGTGGAGCGA AGGAGTAGAATATTTTTATAGCCTTCTAAATGAAAAAGAAAGAGAAAGAGAAAGGAAAATTACTGATGCAGTTACTATAT TATCCTCTGTTCAATGTGACCATAATGGTGCTGTTACTTTAGACTTTTGTCTTAGTAAAATGAGCGATCAAGCAAAAAAC AAGCTGTTTAAAGATTCTGAGCTATCAAAAAAAGATAAAGGAGTGTACTCTCTCTTTAGCGCGTTGATACATCAAGGTTT TTTTGATACGATGCAAGCTATACTTCCGATGTTTAAAGATAAAATACTGGAGGATAAGATACTTTCACCTAGGAGTTATA CTCTTCTTCTCTCCTCACTTTCGGACATGATGCTCGAAAATTCTGAGTCAACTATTCAAGCTAGGGAAGCTATAATGAAC CTTATAAAGTGTGGTAATTTCAATAATCATGAGGGGCGTGAGGAAAAAGCTGCGGTATTTTTTTCTAATGGAAGGGTTCC GATTAAGCGTGCGCTTGCAGGATTGATTGTCGATTGGCAACTTGGTTGTACAAAAAAGGAAGAGGTGTTAAAGGTACTAC AGTTTGCCAAAGAGTTTTGTGCAGTTGAAAGTTTTATGTATTTTAAAAAATCTGTTGTTGATAACCTAAAAATGGTTGGT AGGGATGGTATGAGAAAAAATATAGACTATGGTAAATTAGCAGAAAAGTTGTTTGCTGAATTAGATACGGTATCCGTGCC TAACGGAAGAGGTGATTTTGGTGGAGCTGGTGACCCACAGTCTACACTAGGAAGCACTGAAGTTAGTAGTTTTTCTGGTC GCAATAAGTAG
Upstream 100 bases:
>100_bases ATATTTTGCATGGAGTTTTTTCTATCTTTGGTGATTTTAGTGTTGCTATTTAATTCTAACTTTTGCATAGTACTCTCAAT ATTTTTATATAGGAGGTACA
Downstream 100 bases:
>100_bases GAGTATTTTATGCATGGGTTAGTTAGAAGTTTAATAAATGGAAATTGTGGAGAATTCACGGAAAAGTTTGAATATTTCTT GGATTCATGTCCATCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MPKKMERHAAVLSKLKSVIQHTDSKVMAERRSAIERWVKTYIRQVEYLKDDKLQFLYNIFRDESCWSGTRLNNTILGQRF TEEKIGEIKNPLPIYDMACRYCVIDKIPLLFQKQFESYKSSFSSEEIDDDGKPATSNNKYVKSELLGYMKSQDPVFSFWV DKKSGEFKKHVSATEGFKKAIELKWSEGVEYFYSLLNEKERERERKITDAVTILSSVQCDHNGAVTLDFCLSKMSDQAKN KLFKDSELSKKDKGVYSLFSALIHQGFFDTMQAILPMFKDKILEDKILSPRSYTLLLSSLSDMMLENSESTIQAREAIMN LIKCGNFNNHEGREEKAAVFFSNGRVPIKRALAGLIVDWQLGCTKKEEVLKVLQFAKEFCAVESFMYFKKSVVDNLKMVG RDGMRKNIDYGKLAEKLFAELDTVSVPNGRGDFGGAGDPQSTLGSTEVSSFSGRNK
Sequences:
>Translated_456_residues MPKKMERHAAVLSKLKSVIQHTDSKVMAERRSAIERWVKTYIRQVEYLKDDKLQFLYNIFRDESCWSGTRLNNTILGQRF TEEKIGEIKNPLPIYDMACRYCVIDKIPLLFQKQFESYKSSFSSEEIDDDGKPATSNNKYVKSELLGYMKSQDPVFSFWV DKKSGEFKKHVSATEGFKKAIELKWSEGVEYFYSLLNEKERERERKITDAVTILSSVQCDHNGAVTLDFCLSKMSDQAKN KLFKDSELSKKDKGVYSLFSALIHQGFFDTMQAILPMFKDKILEDKILSPRSYTLLLSSLSDMMLENSESTIQAREAIMN LIKCGNFNNHEGREEKAAVFFSNGRVPIKRALAGLIVDWQLGCTKKEEVLKVLQFAKEFCAVESFMYFKKSVVDNLKMVG RDGMRKNIDYGKLAEKLFAELDTVSVPNGRGDFGGAGDPQSTLGSTEVSSFSGRNK >Mature_455_residues PKKMERHAAVLSKLKSVIQHTDSKVMAERRSAIERWVKTYIRQVEYLKDDKLQFLYNIFRDESCWSGTRLNNTILGQRFT EEKIGEIKNPLPIYDMACRYCVIDKIPLLFQKQFESYKSSFSSEEIDDDGKPATSNNKYVKSELLGYMKSQDPVFSFWVD KKSGEFKKHVSATEGFKKAIELKWSEGVEYFYSLLNEKERERERKITDAVTILSSVQCDHNGAVTLDFCLSKMSDQAKNK LFKDSELSKKDKGVYSLFSALIHQGFFDTMQAILPMFKDKILEDKILSPRSYTLLLSSLSDMMLENSESTIQAREAIMNL IKCGNFNNHEGREEKAAVFFSNGRVPIKRALAGLIVDWQLGCTKKEEVLKVLQFAKEFCAVESFMYFKKSVVDNLKMVGR DGMRKNIDYGKLAEKLFAELDTVSVPNGRGDFGGAGDPQSTLGSTEVSSFSGRNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52094; Mature: 51963
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKMERHAAVLSKLKSVIQHTDSKVMAERRSAIERWVKTYIRQVEYLKDDKLQFLYNIF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDESCWSGTRLNNTILGQRFTEEKIGEIKNPLPIYDMACRYCVIDKIPLLFQKQFESYKS HCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SFSSEEIDDDGKPATSNNKYVKSELLGYMKSQDPVFSFWVDKKSGEFKKHVSATEGFKKA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH IELKWSEGVEYFYSLLNEKERERERKITDAVTILSSVQCDHNGAVTLDFCLSKMSDQAKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH KLFKDSELSKKDKGVYSLFSALIHQGFFDTMQAILPMFKDKILEDKILSPRSYTLLLSSL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SDMMLENSESTIQAREAIMNLIKCGNFNNHEGREEKAAVFFSNGRVPIKRALAGLIVDWQ HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHCCC LGCTKKEEVLKVLQFAKEFCAVESFMYFKKSVVDNLKMVGRDGMRKNIDYGKLAEKLFAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LDTVSVPNGRGDFGGAGDPQSTLGSTEVSSFSGRNK HHCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCC >Mature Secondary Structure PKKMERHAAVLSKLKSVIQHTDSKVMAERRSAIERWVKTYIRQVEYLKDDKLQFLYNIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDESCWSGTRLNNTILGQRFTEEKIGEIKNPLPIYDMACRYCVIDKIPLLFQKQFESYKS HCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SFSSEEIDDDGKPATSNNKYVKSELLGYMKSQDPVFSFWVDKKSGEFKKHVSATEGFKKA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH IELKWSEGVEYFYSLLNEKERERERKITDAVTILSSVQCDHNGAVTLDFCLSKMSDQAKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH KLFKDSELSKKDKGVYSLFSALIHQGFFDTMQAILPMFKDKILEDKILSPRSYTLLLSSL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SDMMLENSESTIQAREAIMNLIKCGNFNNHEGREEKAAVFFSNGRVPIKRALAGLIVDWQ HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHCCC LGCTKKEEVLKVLQFAKEFCAVESFMYFKKSVVDNLKMVGRDGMRKNIDYGKLAEKLFAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LDTVSVPNGRGDFGGAGDPQSTLGSTEVSSFSGRNK HHCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA