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The map label for this gene is 225630086

Identifier: 225630086

GI number: 225630086

Start: 276452

End: 277297

Strand: Direct

Name: 225630086

Synonym: WRi_002640

Alternate gene names: NA

Gene position: 276452-277297 (Clockwise)

Preceding gene: 225630085

Following gene: 225630087

Centisome position: 19.12

GC content: 34.04

Gene sequence:

>846_bases
ATGGATAAGAATACGATAAACGATAGAAATTTGAGTCAAATTCGGGCTTTTCCTGTACTAATAGCGCTAGGATTAATTTT
ATCGCTGCTTTTTTTGGCATATGACAGCACAATTGCACTTGGAGTTGCTGCCGTTTCAATTTTGACTTTTCTTCAAGGAT
TTTTTATTAATGACCCTAATGAAGCAAGAGTGATAGAATTTTTTGGTCATTATATTGGAACTTATTTTAAGTCTGGAATA
TGTGTAACGCTTCCCTTTTCAAGCAAATATATAGTTTCCCTAAAATTTCAGAATATTAACACAGAAAAAATAAAAGTTAA
TGATGCAAATGGAAGTCCAATAGAGATTTCAGCAGTGATTGTTTGGAGAGTAAATAGCCCTGCAAAGGCGTATTATAATG
TTAACAACTATCACGAATTTGTTTTTGTACAAAGTGACTCAGTAATAAGAGAATTAGCTAGTAACTATCCGTATGACAGC
GAGAGCAATGAGGAATCTTTACGTAAAAATTCTGATAAAATTTCAGATGAATTGCGGTCAATGTTACAACAAAGATTAGA
TATTGCAGGAATTGAGATTACAGAAGCAAGAATATCGCATTTGGCGTATTCGTCCGAGATTGCACAAGCAATGTTAAGGC
GTCAACAAGCACATGCTATCACTTCGGCAAGAAGGCATATAGTGCAAAATGCAATAGGAATTGTCGAGGAAGTAATAGCT
CATTTTGAAAAAAACAAAAGCTTACAATTAGATGGCAAGCAAAAGGTTCAATTGATAAATAATTTGTTGGTTGCCCTAAT
CTCTGAGCAAGATGCACAACCGACGATTAGTTTAGATAATAATTAG

Upstream 100 bases:

>100_bases
TTGCCTGATCATGAATTAAGAGAGTTTAAACTATTTGTAAATAAGATAAATAAAACGATCAACAGAGAGAGTTCAAGTGA
AAAAGAAGTTTAAAGACAAT

Downstream 100 bases:

>100_bases
CATAGAAGCCGATTGGGTTTCATAAATGCAAGTCACTATTAATTTCTTGATTAATAGACTAAATGATGTTATAAATTACA
CGCATTAGGGGTGCTCTAGA

Product: SPFH domain/Band 7 family protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDKNTINDRNLSQIRAFPVLIALGLILSLLFLAYDSTIALGVAAVSILTFLQGFFINDPNEARVIEFFGHYIGTYFKSGI
CVTLPFSSKYIVSLKFQNINTEKIKVNDANGSPIEISAVIVWRVNSPAKAYYNVNNYHEFVFVQSDSVIRELASNYPYDS
ESNEESLRKNSDKISDELRSMLQQRLDIAGIEITEARISHLAYSSEIAQAMLRRQQAHAITSARRHIVQNAIGIVEEVIA
HFEKNKSLQLDGKQKVQLINNLLVALISEQDAQPTISLDNN

Sequences:

>Translated_281_residues
MDKNTINDRNLSQIRAFPVLIALGLILSLLFLAYDSTIALGVAAVSILTFLQGFFINDPNEARVIEFFGHYIGTYFKSGI
CVTLPFSSKYIVSLKFQNINTEKIKVNDANGSPIEISAVIVWRVNSPAKAYYNVNNYHEFVFVQSDSVIRELASNYPYDS
ESNEESLRKNSDKISDELRSMLQQRLDIAGIEITEARISHLAYSSEIAQAMLRRQQAHAITSARRHIVQNAIGIVEEVIA
HFEKNKSLQLDGKQKVQLINNLLVALISEQDAQPTISLDNN
>Mature_281_residues
MDKNTINDRNLSQIRAFPVLIALGLILSLLFLAYDSTIALGVAAVSILTFLQGFFINDPNEARVIEFFGHYIGTYFKSGI
CVTLPFSSKYIVSLKFQNINTEKIKVNDANGSPIEISAVIVWRVNSPAKAYYNVNNYHEFVFVQSDSVIRELASNYPYDS
ESNEESLRKNSDKISDELRSMLQQRLDIAGIEITEARISHLAYSSEIAQAMLRRQQAHAITSARRHIVQNAIGIVEEVIA
HFEKNKSLQLDGKQKVQLINNLLVALISEQDAQPTISLDNN

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31553; Mature: 31553

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNTINDRNLSQIRAFPVLIALGLILSLLFLAYDSTIALGVAAVSILTFLQGFFINDPN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC
EARVIEFFGHYIGTYFKSGICVTLPFSSKYIVSLKFQNINTEKIKVNDANGSPIEISAVI
HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEE
VWRVNSPAKAYYNVNNYHEFVFVQSDSVIRELASNYPYDSESNEESLRKNSDKISDELRS
EEEECCCCCEEEECCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHH
MLQQRLDIAGIEITEARISHLAYSSEIAQAMLRRQQAHAITSARRHIVQNAIGIVEEVIA
HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFEKNKSLQLDGKQKVQLINNLLVALISEQDAQPTISLDNN
HHHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEECCCC
>Mature Secondary Structure
MDKNTINDRNLSQIRAFPVLIALGLILSLLFLAYDSTIALGVAAVSILTFLQGFFINDPN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC
EARVIEFFGHYIGTYFKSGICVTLPFSSKYIVSLKFQNINTEKIKVNDANGSPIEISAVI
HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEE
VWRVNSPAKAYYNVNNYHEFVFVQSDSVIRELASNYPYDSESNEESLRKNSDKISDELRS
EEEECCCCCEEEECCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHH
MLQQRLDIAGIEITEARISHLAYSSEIAQAMLRRQQAHAITSARRHIVQNAIGIVEEVIA
HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFEKNKSLQLDGKQKVQLINNLLVALISEQDAQPTISLDNN
HHHCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA