| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yfiQ [C]
Identifier: 222527446
GI number: 222527446
Start: 5255465
End: 5257555
Strand: Direct
Name: yfiQ [C]
Synonym: Chy400_4237
Alternate gene names: 222527446
Gene position: 5255465-5257555 (Clockwise)
Preceding gene: 222527445
Following gene: 222527447
Centisome position: 99.74
GC content: 56.05
Gene sequence:
>2091_bases ATGCTAGAAGCTATCTTCTCTCCACAATCGGTAGCCGTGATTGGCGCGTCACCGGACCCGGCGCGTCTCGGCCACCGTGT TCTGAAAAATATTCTCGATCACGGTTATCAAGGCAATATCTATCCCATTCACCCCCGCGCAACCGAAGTGCTTGGGTTGT GCGCCTACCCTTCAGTGCTTGATGTTCCTAATCCGATTGATCTGGCCGTGGTCGTCATTCCACCGCAACACGTGATTGCA GCGGTTGACGAATGCGGTCGAAAGGGGATCAAAGGACTGGTCGTAATTACTGCCGGCTTTAAAGAGGTTGGCGGTGCCGG ACGCGAACTGGAACGCGAACTGTTAGCTACCGTGCGCCGGTACGGCATGCGCATGATCGGCCCCAACTCGCTTGGTATCA TTGATACCATCAGCAAGCTGAACGCCTCATTCGCGAATGCTATGCCCCTCCCCGGCAACATCGCCTTGATGTCGCAGTCG GGTGCAATTTGTACCGCAATTCTTGATTGGAGTCACCAGCAGGGCATCGGCTTCTCGCGTTTTGTCAGTCTGGGCAACAA GACAGATGTTGATGAAGTAGCGTTGCTAGAAGCCTGGAACCGCGATGAGCATTCCAGAGTGATACTGGCCTATCTCGAAG CTATCGACGATGGCCCCGGTTTTATCCGCGTGGCTCGCGAAGTGACTAAGACGACACCGGTTGTCGCCATCAAAAGTGGC ACGACGGCTGCCGGAACCCGCGCCGCTTCGTCGCATACCGGCTCGCTGGCCGGTTCTGAAGCTGCCTATGAAACAGCGTT TGCGCAAAGTGGTATTCTGCGCGCCCGCACCATGAACGAGCTGTTCGATCTGGCGCTGGTCTTTGCCTATCAGCCGATGA TCCGCGGGAACCGGGTTGCGATTGTTACCAATGCCGGTGGGCCGGGGATCATCGCTACCGACGCCGTCGAACGTAGTGGC CTGGCAATGGCCGAATTTACGCCTGAAACAATTCGGCATTTGCAGGAAACATTACCACCGAATGCGAATGTCTTTAACCC GATTGATGTGATCGGTGATGCAACCCCGGATCGCTACGCTGTGGCGATTAAAGCCGCCCTGGCCGATCCAAACGTGGACG GCTTGATTATCCTTTTCACGCCCCAGGCTGTCTCTGAACCCCTGACGACCGCCAACCTGATTATCGATCTCGTTAAAGGG TCTGATAAACCGGTAGTAACCAGTTTTATGGGTGGCGCCAGTATCGAAAAAGCGGTGCAGGCGCTTAATGCTGCGCGTAT CCCCAACTATCTCTTCCCGGAACGGGCCGTCCAATCACTGGCCGCAATGTACCGGCAATCGCTCTGGCAACGCCGTCCCA CTCCAACCTATCGTACCTTTTCGGTTGATCGCGAACGGGTTGCCCGCCTCTTCGCGAGTGTGCGGGAAGCCGGTCGGGTA GAGCTAGGCGAAGTTGAGGCGCGGGAAGTGATCGAGGCGTATGGTATGCGTCTGCCAAAAAGCCGCCTGGCCCAAACTCC CGACGAAGCGGTCGCGATTGCCAATGAGTTCGGGTATCCGGTCGTGATGAAGATATCCAGCCCCGATATTCTGCACAAGA GTGATATTGGCGGCGTTCGAGTTGGTCTGAGTGACGCGAGTGCGGTACGCGATGCATTTGAACTGATCGAATACCGGGCA CGCAAGTACCTGCCTTCTGCCCGCATTTGGGGCGTACTGGTACAGGAGATGGTTCGTAAAGGCCGTGAAGTTTTGGTCGG CGTGAGTCGCGATCCGCAGTTCGGGCCACTTATTGCGGTGGGAATGGGAGGCATTTATGTCGAGGTGTTGAAAGATGTTG CCTTCCGCCTCGCACCACTCAGTGTTGAAGAGGTGCAGGAGCAGATACGTTCGATCCGTGCATACCCGCTCTTACGTGGT GTGCGTGGCGAAGCACCGGCTGACATCGCAGCAATTGAAGAGACGGTGCTGCGGGTAAGCCAATTGGTGACCGATTTCCC GGAAATTGTCGAGATGGATATCAATCCACTCGTCGTCCATCATGAAGGTGAGGGCGCAGTCGTCCTCGATGCCCGGATCA TCCTCAACTAA
Upstream 100 bases:
>100_bases ACAGGATGCGTACATATGCATCCTGAACCTGCGCTTGTCGCCAGCGGCTGTATCGGTTATGATGAATGCGCAAGGTGTGC GAAAAAGGAGCACCCATATC
Downstream 100 bases:
>100_bases TGGAGGCAATGATGGCAACACTGTATGTCGCCTCAACCGAAACCTACGTCGGCAAAAGTGCGGTGTGTGTGGGATTGCTG CGGCGGATGCAGCAAGATGG
Product: acetyl coenzyme A synthetase alpha domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MLEAIFSPQSVAVIGASPDPARLGHRVLKNILDHGYQGNIYPIHPRATEVLGLCAYPSVLDVPNPIDLAVVVIPPQHVIA AVDECGRKGIKGLVVITAGFKEVGGAGRELERELLATVRRYGMRMIGPNSLGIIDTISKLNASFANAMPLPGNIALMSQS GAICTAILDWSHQQGIGFSRFVSLGNKTDVDEVALLEAWNRDEHSRVILAYLEAIDDGPGFIRVAREVTKTTPVVAIKSG TTAAGTRAASSHTGSLAGSEAAYETAFAQSGILRARTMNELFDLALVFAYQPMIRGNRVAIVTNAGGPGIIATDAVERSG LAMAEFTPETIRHLQETLPPNANVFNPIDVIGDATPDRYAVAIKAALADPNVDGLIILFTPQAVSEPLTTANLIIDLVKG SDKPVVTSFMGGASIEKAVQALNAARIPNYLFPERAVQSLAAMYRQSLWQRRPTPTYRTFSVDRERVARLFASVREAGRV ELGEVEAREVIEAYGMRLPKSRLAQTPDEAVAIANEFGYPVVMKISSPDILHKSDIGGVRVGLSDASAVRDAFELIEYRA RKYLPSARIWGVLVQEMVRKGREVLVGVSRDPQFGPLIAVGMGGIYVEVLKDVAFRLAPLSVEEVQEQIRSIRAYPLLRG VRGEAPADIAAIEETVLRVSQLVTDFPEIVEMDINPLVVHHEGEGAVVLDARIILN
Sequences:
>Translated_696_residues MLEAIFSPQSVAVIGASPDPARLGHRVLKNILDHGYQGNIYPIHPRATEVLGLCAYPSVLDVPNPIDLAVVVIPPQHVIA AVDECGRKGIKGLVVITAGFKEVGGAGRELERELLATVRRYGMRMIGPNSLGIIDTISKLNASFANAMPLPGNIALMSQS GAICTAILDWSHQQGIGFSRFVSLGNKTDVDEVALLEAWNRDEHSRVILAYLEAIDDGPGFIRVAREVTKTTPVVAIKSG TTAAGTRAASSHTGSLAGSEAAYETAFAQSGILRARTMNELFDLALVFAYQPMIRGNRVAIVTNAGGPGIIATDAVERSG LAMAEFTPETIRHLQETLPPNANVFNPIDVIGDATPDRYAVAIKAALADPNVDGLIILFTPQAVSEPLTTANLIIDLVKG SDKPVVTSFMGGASIEKAVQALNAARIPNYLFPERAVQSLAAMYRQSLWQRRPTPTYRTFSVDRERVARLFASVREAGRV ELGEVEAREVIEAYGMRLPKSRLAQTPDEAVAIANEFGYPVVMKISSPDILHKSDIGGVRVGLSDASAVRDAFELIEYRA RKYLPSARIWGVLVQEMVRKGREVLVGVSRDPQFGPLIAVGMGGIYVEVLKDVAFRLAPLSVEEVQEQIRSIRAYPLLRG VRGEAPADIAAIEETVLRVSQLVTDFPEIVEMDINPLVVHHEGEGAVVLDARIILN >Mature_696_residues MLEAIFSPQSVAVIGASPDPARLGHRVLKNILDHGYQGNIYPIHPRATEVLGLCAYPSVLDVPNPIDLAVVVIPPQHVIA AVDECGRKGIKGLVVITAGFKEVGGAGRELERELLATVRRYGMRMIGPNSLGIIDTISKLNASFANAMPLPGNIALMSQS GAICTAILDWSHQQGIGFSRFVSLGNKTDVDEVALLEAWNRDEHSRVILAYLEAIDDGPGFIRVAREVTKTTPVVAIKSG TTAAGTRAASSHTGSLAGSEAAYETAFAQSGILRARTMNELFDLALVFAYQPMIRGNRVAIVTNAGGPGIIATDAVERSG LAMAEFTPETIRHLQETLPPNANVFNPIDVIGDATPDRYAVAIKAALADPNVDGLIILFTPQAVSEPLTTANLIIDLVKG SDKPVVTSFMGGASIEKAVQALNAARIPNYLFPERAVQSLAAMYRQSLWQRRPTPTYRTFSVDRERVARLFASVREAGRV ELGEVEAREVIEAYGMRLPKSRLAQTPDEAVAIANEFGYPVVMKISSPDILHKSDIGGVRVGLSDASAVRDAFELIEYRA RKYLPSARIWGVLVQEMVRKGREVLVGVSRDPQFGPLIAVGMGGIYVEVLKDVAFRLAPLSVEEVQEQIRSIRAYPLLRG VRGEAPADIAAIEETVLRVSQLVTDFPEIVEMDINPLVVHHEGEGAVVLDARIILN
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=695, Percent_Identity=32.6618705035971, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 75096; Mature: 75096
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEAIFSPQSVAVIGASPDPARLGHRVLKNILDHGYQGNIYPIHPRATEVLGLCAYPSVL CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCC DVPNPIDLAVVVIPPQHVIAAVDECGRKGIKGLVVITAGFKEVGGAGRELERELLATVRR CCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHH YGMRMIGPNSLGIIDTISKLNASFANAMPLPGNIALMSQSGAICTAILDWSHQQGIGFSR CCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHH FVSLGNKTDVDEVALLEAWNRDEHSRVILAYLEAIDDGPGFIRVAREVTKTTPVVAIKSG HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECC TTAAGTRAASSHTGSLAGSEAAYETAFAQSGILRARTMNELFDLALVFAYQPMIRGNRVA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE IVTNAGGPGIIATDAVERSGLAMAEFTPETIRHLQETLPPNANVFNPIDVIGDATPDRYA EEECCCCCCEEEECCHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEE VAIKAALADPNVDGLIILFTPQAVSEPLTTANLIIDLVKGSDKPVVTSFMGGASIEKAVQ EEEEEEECCCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHH ALNAARIPNYLFPERAVQSLAAMYRQSLWQRRPTPTYRTFSVDRERVARLFASVREAGRV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCC ELGEVEAREVIEAYGMRLPKSRLAQTPDEAVAIANEFGYPVVMKISSPDILHKSDIGGVR EECCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCEECCCCCCEE VGLSDASAVRDAFELIEYRARKYLPSARIWGVLVQEMVRKGREVLVGVSRDPQFGPLIAV ECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEE GMGGIYVEVLKDVAFRLAPLSVEEVQEQIRSIRAYPLLRGVRGEAPADIAAIEETVLRVS CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QLVTDFPEIVEMDINPLVVHHEGEGAVVLDARIILN HHHHCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure MLEAIFSPQSVAVIGASPDPARLGHRVLKNILDHGYQGNIYPIHPRATEVLGLCAYPSVL CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCC DVPNPIDLAVVVIPPQHVIAAVDECGRKGIKGLVVITAGFKEVGGAGRELERELLATVRR CCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHH YGMRMIGPNSLGIIDTISKLNASFANAMPLPGNIALMSQSGAICTAILDWSHQQGIGFSR CCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHH FVSLGNKTDVDEVALLEAWNRDEHSRVILAYLEAIDDGPGFIRVAREVTKTTPVVAIKSG HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECC TTAAGTRAASSHTGSLAGSEAAYETAFAQSGILRARTMNELFDLALVFAYQPMIRGNRVA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE IVTNAGGPGIIATDAVERSGLAMAEFTPETIRHLQETLPPNANVFNPIDVIGDATPDRYA EEECCCCCCEEEECCHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEE VAIKAALADPNVDGLIILFTPQAVSEPLTTANLIIDLVKGSDKPVVTSFMGGASIEKAVQ EEEEEEECCCCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHH ALNAARIPNYLFPERAVQSLAAMYRQSLWQRRPTPTYRTFSVDRERVARLFASVREAGRV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCC ELGEVEAREVIEAYGMRLPKSRLAQTPDEAVAIANEFGYPVVMKISSPDILHKSDIGGVR EECCHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCEECCCCCCEE VGLSDASAVRDAFELIEYRARKYLPSARIWGVLVQEMVRKGREVLVGVSRDPQFGPLIAV ECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEE GMGGIYVEVLKDVAFRLAPLSVEEVQEQIRSIRAYPLLRGVRGEAPADIAAIEETVLRVS CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH QLVTDFPEIVEMDINPLVVHHEGEGAVVLDARIILN HHHHCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]