Click here to switch to the map view.

The map label for this gene is 222527445

Identifier: 222527445

GI number: 222527445

Start: 5254555

End: 5255319

Strand: Direct

Name: 222527445

Synonym: Chy400_4236

Alternate gene names: NA

Gene position: 5254555-5255319 (Clockwise)

Preceding gene: 222527444

Following gene: 222527446

Centisome position: 99.73

GC content: 58.56

Gene sequence:

>765_bases
ATGATCTGGTCTGATATCGCCTTCTATTACCTGTTGCCCTTACTCACGGTCGTTGCATTATGGTTGGGTCTCACCTTTGG
TTTGATCTGGCTGAACCGACGCGGGCAATGGGTTGCCGGATGGGCGGTATTTCTTAGCCTGCCGGTCTTGATCTTCGCCC
ACAGTGAATTGCTCGCAACACGCCACGATCTGAGCGCAGGCGGGGCCTACCGGGCTTTTGCTGCCGGTATGTTGATCTGG
GCCTGGCACGAGCTTGCGTTCTACAGTGGTATCCTGGCCGGCCCACGCCGCAAGCCCTGTCCACCCGACGCTCGTGGATT
TCAACGCTTCTACTACGCCCTTGGCACCCACTTTTACCATCAATTGAGCTGTCTGCTCGAACTGGGCCTGCTGGTTTGGC
TGCTCCAGGATGCCAGCCACTGGCTGGGGCCATTGACCTTTGGCCTGAGTTGGGCACTGCAACAGAGCGCAAAACTGAAC
GTCCTGTATGGGGTACGCTCGCTCCAGGTTGATCTTTTTCCGGCGCATCTTGCCTTCCTGGCCAGCTACTGGCAACCAGG
GCCACCAAGTGCCTTTTTCCGCCCCAGCGTCTCGGTAAGCACATTGCTGGCACTGATGCTATGGCTGAGTATCGGTGCTC
ATATCGGTGATCCGGCAGCCATTCGGCTTGCCCTGTTGGCCAGCCTCCTCACCCTGGGCGCACTTGAGCACTGGCTCCTT
TTGATTCCTGCACCGGCGACTGTCCCCGCGCCGGCGACCGATTAA

Upstream 100 bases:

>100_bases
GCACCGTTTTCACTCCGCCTCTCGCCGTCCCCCTTCACTATTTTCTTCATTTCGTGTACAATTATGACATTAGTGCAAAA
ACGTATAGAAAGTGCAGGCT

Downstream 100 bases:

>100_bases
TGCCTGTTCTCACCACTCTTGTAACCGGGCTGAGCACCATGCATTACAGGATGCGTACATATGCATCCTGAACCTGCGCT
TGTCGCCAGCGGCTGTATCG

Product: photosynthetic complex assembly protein 2

Products: NA

Alternate protein names: ORF274 [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIWSDIAFYYLLPLLTVVALWLGLTFGLIWLNRRGQWVAGWAVFLSLPVLIFAHSELLATRHDLSAGGAYRAFAAGMLIW
AWHELAFYSGILAGPRRKPCPPDARGFQRFYYALGTHFYHQLSCLLELGLLVWLLQDASHWLGPLTFGLSWALQQSAKLN
VLYGVRSLQVDLFPAHLAFLASYWQPGPPSAFFRPSVSVSTLLALMLWLSIGAHIGDPAAIRLALLASLLTLGALEHWLL
LIPAPATVPAPATD

Sequences:

>Translated_254_residues
MIWSDIAFYYLLPLLTVVALWLGLTFGLIWLNRRGQWVAGWAVFLSLPVLIFAHSELLATRHDLSAGGAYRAFAAGMLIW
AWHELAFYSGILAGPRRKPCPPDARGFQRFYYALGTHFYHQLSCLLELGLLVWLLQDASHWLGPLTFGLSWALQQSAKLN
VLYGVRSLQVDLFPAHLAFLASYWQPGPPSAFFRPSVSVSTLLALMLWLSIGAHIGDPAAIRLALLASLLTLGALEHWLL
LIPAPATVPAPATD
>Mature_254_residues
MIWSDIAFYYLLPLLTVVALWLGLTFGLIWLNRRGQWVAGWAVFLSLPVLIFAHSELLATRHDLSAGGAYRAFAAGMLIW
AWHELAFYSGILAGPRRKPCPPDARGFQRFYYALGTHFYHQLSCLLELGLLVWLLQDASHWLGPLTFGLSWALQQSAKLN
VLYGVRSLQVDLFPAHLAFLASYWQPGPPSAFFRPSVSVSTLLALMLWLSIGAHIGDPAAIRLALLASLLTLGALEHWLL
LIPAPATVPAPATD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017496 [H]

Pfam domain/function: PF12291 DUF3623 [H]

EC number: NA

Molecular weight: Translated: 28099; Mature: 28099

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWSDIAFYYLLPLLTVVALWLGLTFGLIWLNRRGQWVAGWAVFLSLPVLIFAHSELLAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RHDLSAGGAYRAFAAGMLIWAWHELAFYSGILAGPRRKPCPPDARGFQRFYYALGTHFYH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QLSCLLELGLLVWLLQDASHWLGPLTFGLSWALQQSAKLNVLYGVRSLQVDLFPAHLAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHEECHHHHHHHHHHHHHHHH
ASYWQPGPPSAFFRPSVSVSTLLALMLWLSIGAHIGDPAAIRLALLASLLTLGALEHWLL
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHE
LIPAPATVPAPATD
EECCCCCCCCCCCC
>Mature Secondary Structure
MIWSDIAFYYLLPLLTVVALWLGLTFGLIWLNRRGQWVAGWAVFLSLPVLIFAHSELLAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RHDLSAGGAYRAFAAGMLIWAWHELAFYSGILAGPRRKPCPPDARGFQRFYYALGTHFYH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QLSCLLELGLLVWLLQDASHWLGPLTFGLSWALQQSAKLNVLYGVRSLQVDLFPAHLAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHEECHHHHHHHHHHHHHHHH
ASYWQPGPPSAFFRPSVSVSTLLALMLWLSIGAHIGDPAAIRLALLASLLTLGALEHWLL
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHE
LIPAPATVPAPATD
EECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA