| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527404
Identifier: 222527404
GI number: 222527404
Start: 5200128
End: 5201252
Strand: Reverse
Name: 222527404
Synonym: Chy400_4195
Alternate gene names: NA
Gene position: 5201252-5200128 (Counterclockwise)
Preceding gene: 222527405
Following gene: 222527403
Centisome position: 98.72
GC content: 58.76
Gene sequence:
>1125_bases ATGAAGATTGGTGCCGTCCTGACAAGAGAACAGGTCATTAGTGCGAGGTATGTTCACCACGGCCTGTTGACCCCATTTCC CGACCCGCTCGTTGCGGCGCAGCGGCTGGCAGGTGTGCAGGCCCAAATTCTACCCGCCGCCGGATTGGCGTTGTGGAATC GAGTGGCAGGCTTCAGTGCTGATCAGCTCGAACATCTGCTGTATCACGAACGGTCGCTGGTACGGCTCTGGGGGCAGCGT GGTACATTGCATCTGTACGCCATGACTGACTGGCCGTTAGTGTACGGTATGCAGGCCGGGCAGGCCACATATTGGGAACA AGAGGCCCAACGTGACGGTTGGGCGGTAGACGAGTATGAGGCATTTATTGCGCGGGTAGGGGATTTGCTCTACGAACACG AGACATTGGGGCGGAGTGACCTGCGCCGCCTGTTGCCGGCGATTGATCAGCGCCATTTGTCAGGGTGGGGAGGTGTATTT GCCATTCTAACCCGGCGTGGTCTGGCGTGTCACGCGGCGCCGCGTGGCGGGGAAGCACGCATGACGCACCGATTGCGCTG GCGCCCCGATCTGGTGTGGGAACCGCCTGATACCGATACGGCAAATGCAGAGATGCTTCGGCGCTATCTGGCTGTGTTTG GCCCGGTCAGGCTGGTCGATATGACGTGCTGGCGCGGACGCACGCAGGCTGAAATGAAACGTTGGCTGGCGTTGATTGGT GAAGAGGTGGTACGGGTATCAGTAGATGGGCAACCGGCGTGGTGGTTGCAGAGTTATCTGGATCGGCTGGCCGATCTACC GACACCTGCCGATTTGCCACCGCACTTGTTGGGACGTTTTGATCCGTTATTGCTCGGTACCCGTGATAAAAGCTGGCTCA TTGATGCTGATGTCTACAATCGGGTCTGGCGACCGGCTGGACATATTGAAGCGACAATGCTGGTACACGGACGGATTGCC GGGACGTGGCGTTACGATTGGCGTGGTAGCAGTATCGTTGTGACGCTGCGGCCATTTAAGCCGTTACCACCGTCAGAGCG AATCCGTATCGAGAGCCTGGCTGCTGGCGTCGCCGAACACTTTGCGGCACCGTTGGGAGATTGTCGATGGGAAGCGGTAG CGTGA
Upstream 100 bases:
>100_bases CGGTGGAGGTGTTGCCCACGCCAACCATTCCTGCCGATAGCGAGCCATTGGTAAGAGTGTTTGGGCGTGGCGTGGCTGCG CTAGAATTGATGAAAGAGCC
Downstream 100 bases:
>100_bases TCTGGCGGTTATTACCACCGGCACAGGGCGATCCAACCACTGAACTGGCGGCTGGGGCGGCGATGCTGGCAGGGTTGAAA GAGACGAACTGCCCCGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKIGAVLTREQVISARYVHHGLLTPFPDPLVAAQRLAGVQAQILPAAGLALWNRVAGFSADQLEHLLYHERSLVRLWGQR GTLHLYAMTDWPLVYGMQAGQATYWEQEAQRDGWAVDEYEAFIARVGDLLYEHETLGRSDLRRLLPAIDQRHLSGWGGVF AILTRRGLACHAAPRGGEARMTHRLRWRPDLVWEPPDTDTANAEMLRRYLAVFGPVRLVDMTCWRGRTQAEMKRWLALIG EEVVRVSVDGQPAWWLQSYLDRLADLPTPADLPPHLLGRFDPLLLGTRDKSWLIDADVYNRVWRPAGHIEATMLVHGRIA GTWRYDWRGSSIVVTLRPFKPLPPSERIRIESLAAGVAEHFAAPLGDCRWEAVA
Sequences:
>Translated_374_residues MKIGAVLTREQVISARYVHHGLLTPFPDPLVAAQRLAGVQAQILPAAGLALWNRVAGFSADQLEHLLYHERSLVRLWGQR GTLHLYAMTDWPLVYGMQAGQATYWEQEAQRDGWAVDEYEAFIARVGDLLYEHETLGRSDLRRLLPAIDQRHLSGWGGVF AILTRRGLACHAAPRGGEARMTHRLRWRPDLVWEPPDTDTANAEMLRRYLAVFGPVRLVDMTCWRGRTQAEMKRWLALIG EEVVRVSVDGQPAWWLQSYLDRLADLPTPADLPPHLLGRFDPLLLGTRDKSWLIDADVYNRVWRPAGHIEATMLVHGRIA GTWRYDWRGSSIVVTLRPFKPLPPSERIRIESLAAGVAEHFAAPLGDCRWEAVA >Mature_374_residues MKIGAVLTREQVISARYVHHGLLTPFPDPLVAAQRLAGVQAQILPAAGLALWNRVAGFSADQLEHLLYHERSLVRLWGQR GTLHLYAMTDWPLVYGMQAGQATYWEQEAQRDGWAVDEYEAFIARVGDLLYEHETLGRSDLRRLLPAIDQRHLSGWGGVF AILTRRGLACHAAPRGGEARMTHRLRWRPDLVWEPPDTDTANAEMLRRYLAVFGPVRLVDMTCWRGRTQAEMKRWLALIG EEVVRVSVDGQPAWWLQSYLDRLADLPTPADLPPHLLGRFDPLLLGTRDKSWLIDADVYNRVWRPAGHIEATMLVHGRIA GTWRYDWRGSSIVVTLRPFKPLPPSERIRIESLAAGVAEHFAAPLGDCRWEAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42398; Mature: 42398
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGAVLTREQVISARYVHHGLLTPFPDPLVAAQRLAGVQAQILPAAGLALWNRVAGFSA CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH DQLEHLLYHERSLVRLWGQRGTLHLYAMTDWPLVYGMQAGQATYWEQEAQRDGWAVDEYE HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCHHHHH AFIARVGDLLYEHETLGRSDLRRLLPAIDQRHLSGWGGVFAILTRRGLACHAAPRGGEAR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCHH MTHRLRWRPDLVWEPPDTDTANAEMLRRYLAVFGPVRLVDMTCWRGRTQAEMKRWLALIG HHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCHHEEEEHHCCCCCHHHHHHHHHHHC EEVVRVSVDGQPAWWLQSYLDRLADLPTPADLPPHLLGRFDPLLLGTRDKSWLIDADVYN CHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEHHHHH RVWRPAGHIEATMLVHGRIAGTWRYDWRGSSIVVTLRPFKPLPPSERIRIESLAAGVAEH HHCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHEEHHHHHHHHHHH FAAPLGDCRWEAVA HCCCCCCCCEECCC >Mature Secondary Structure MKIGAVLTREQVISARYVHHGLLTPFPDPLVAAQRLAGVQAQILPAAGLALWNRVAGFSA CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH DQLEHLLYHERSLVRLWGQRGTLHLYAMTDWPLVYGMQAGQATYWEQEAQRDGWAVDEYE HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCHHHHH AFIARVGDLLYEHETLGRSDLRRLLPAIDQRHLSGWGGVFAILTRRGLACHAAPRGGEAR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCHH MTHRLRWRPDLVWEPPDTDTANAEMLRRYLAVFGPVRLVDMTCWRGRTQAEMKRWLALIG HHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCHHEEEEHHCCCCCHHHHHHHHHHHC EEVVRVSVDGQPAWWLQSYLDRLADLPTPADLPPHLLGRFDPLLLGTRDKSWLIDADVYN CHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCEEEEHHHHH RVWRPAGHIEATMLVHGRIAGTWRYDWRGSSIVVTLRPFKPLPPSERIRIESLAAGVAEH HHCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHEEHHHHHHHHHHH FAAPLGDCRWEAVA HCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA