| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527403
Identifier: 222527403
GI number: 222527403
Start: 5199313
End: 5200131
Strand: Reverse
Name: 222527403
Synonym: Chy400_4194
Alternate gene names: NA
Gene position: 5200131-5199313 (Counterclockwise)
Preceding gene: 222527404
Following gene: 222527402
Centisome position: 98.69
GC content: 57.39
Gene sequence:
>819_bases GTGATCTGGCGGTTATTACCACCGGCACAGGGCGATCCAACCACTGAACTGGCGGCTGGGGCGGCGATGCTGGCAGGGTT GAAAGAGACGAACTGCCCCGCAATACGCTGGTATGCCGCCGGCTCACGGCCCGCGCTGGTCATAGGTTCGGGTCAGAAAT TGAGTGATGTTGATCATACAGCATTGCGTCAGCAGGGGGTGACCCTCCATCGTCGGTCGAGCGGTGGTACGGCAGTGTTG TTCGTGCCTGGCTTGTTGATGCAGGATATTGCGTTACCGCTTGACCATCCTCTGTACCATCCAGACGTGAGTGAGTCGTA CCGCTGGTTGGGCGATGTGTGGCAGGCGACGCTGGCACAGTTTGGTATTCATACCAGTCTGATCGATATTGCCGCAGCAC GTGCTGATCGTCAGACGCTTGATCCATTGATTGCACGGGCCTGCTTTGGTGGTCAGTCACCATATGAAGTACTGGTGGCG GGTCGGAAGCTGGTAGGCTTTGCGCAGATTCGGCGACGTGAGGGGGTGCTTTTTCAAGTCGGCCTGTACACACACTGGCC TGGCCGGCAACTGGCGACCCTGCTGGCCATGAATGAGGCTGAACGTACCATCTTCGGCGAACGATTGGCCGATAGGGTAA CCGATCTGGTAACGGTATGCGAGTCGCCACCAGATATCCATCAAATTGCAGCAGCCTTTGCCATGGTGTTGCGTCAACGA TACGAGGTGAGTATCACTGCTGCGGATTGGACAGAGGCTGAACGTGAGGCGATGATTGCAGCGCAGGCGCGCTTTGCGCC CTTACGTCTGGAAGGTTAG
Upstream 100 bases:
>100_bases CGTTACCACCGTCAGAGCGAATCCGTATCGAGAGCCTGGCTGCTGGCGTCGCCGAACACTTTGCGGCACCGTTGGGAGAT TGTCGATGGGAAGCGGTAGC
Downstream 100 bases:
>100_bases AGTTTGGCTATGCGCAGATTACTCGTGCTGTTCAGTATTCTTCTTATCGGTATAGTGACCGCATGCGCCCGGCGTGAAGC GGTACTCTCTTCCTGGGCAC
Product: biotin/lipoate A/B protein ligase
Products: NA
Alternate protein names: Lipoate Protein Ligase
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MIWRLLPPAQGDPTTELAAGAAMLAGLKETNCPAIRWYAAGSRPALVIGSGQKLSDVDHTALRQQGVTLHRRSSGGTAVL FVPGLLMQDIALPLDHPLYHPDVSESYRWLGDVWQATLAQFGIHTSLIDIAAARADRQTLDPLIARACFGGQSPYEVLVA GRKLVGFAQIRRREGVLFQVGLYTHWPGRQLATLLAMNEAERTIFGERLADRVTDLVTVCESPPDIHQIAAAFAMVLRQR YEVSITAADWTEAEREAMIAAQARFAPLRLEG
Sequences:
>Translated_272_residues MIWRLLPPAQGDPTTELAAGAAMLAGLKETNCPAIRWYAAGSRPALVIGSGQKLSDVDHTALRQQGVTLHRRSSGGTAVL FVPGLLMQDIALPLDHPLYHPDVSESYRWLGDVWQATLAQFGIHTSLIDIAAARADRQTLDPLIARACFGGQSPYEVLVA GRKLVGFAQIRRREGVLFQVGLYTHWPGRQLATLLAMNEAERTIFGERLADRVTDLVTVCESPPDIHQIAAAFAMVLRQR YEVSITAADWTEAEREAMIAAQARFAPLRLEG >Mature_272_residues MIWRLLPPAQGDPTTELAAGAAMLAGLKETNCPAIRWYAAGSRPALVIGSGQKLSDVDHTALRQQGVTLHRRSSGGTAVL FVPGLLMQDIALPLDHPLYHPDVSESYRWLGDVWQATLAQFGIHTSLIDIAAARADRQTLDPLIARACFGGQSPYEVLVA GRKLVGFAQIRRREGVLFQVGLYTHWPGRQLATLLAMNEAERTIFGERLADRVTDLVTVCESPPDIHQIAAAFAMVLRQR YEVSITAADWTEAEREAMIAAQARFAPLRLEG
Specific function: Unknown
COG id: COG0095
COG function: function code H; Lipoate-protein ligase A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29788; Mature: 29788
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWRLLPPAQGDPTTELAAGAAMLAGLKETNCPAIRWYAAGSRPALVIGSGQKLSDVDHT CCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHH ALRQQGVTLHRRSSGGTAVLFVPGLLMQDIALPLDHPLYHPDVSESYRWLGDVWQATLAQ HHHHCCCEEEEECCCCEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FGIHTSLIDIAAARADRQTLDPLIARACFGGQSPYEVLVAGRKLVGFAQIRRREGVLFQV HCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCEEEE GLYTHWPGRQLATLLAMNEAERTIFGERLADRVTDLVTVCESPPDIHQIAAAFAMVLRQR ECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YEVSITAADWTEAEREAMIAAQARFAPLRLEG HEEEEEECCCHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MIWRLLPPAQGDPTTELAAGAAMLAGLKETNCPAIRWYAAGSRPALVIGSGQKLSDVDHT CCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHH ALRQQGVTLHRRSSGGTAVLFVPGLLMQDIALPLDHPLYHPDVSESYRWLGDVWQATLAQ HHHHCCCEEEEECCCCEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FGIHTSLIDIAAARADRQTLDPLIARACFGGQSPYEVLVAGRKLVGFAQIRRREGVLFQV HCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHCCCEEEE GLYTHWPGRQLATLLAMNEAERTIFGERLADRVTDLVTVCESPPDIHQIAAAFAMVLRQR ECEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YEVSITAADWTEAEREAMIAAQARFAPLRLEG HEEEEEECCCHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA