Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527392
Identifier: 222527392
GI number: 222527392
Start: 5185823
End: 5186866
Strand: Direct
Name: 222527392
Synonym: Chy400_4183
Alternate gene names: NA
Gene position: 5185823-5186866 (Clockwise)
Preceding gene: 222527388
Following gene: 222527394
Centisome position: 98.42
GC content: 53.64
Gene sequence:
>1044_bases ATGTACAGAGTTACGCTTGTTCTGGCGGTCTTCCTCGTGAGCACCATCATATCTCCGGCATCTCCAGGTGCAGCATCAGG TTCTGACCCAATCTGCTTCACCGATCATGAGGAATGTGTCGATCCACGTTTTGCCGATTTCTGGCGGAGTAACGATGCTC ATGCAATCACCGGCGCAAAAGGTAACGCTTTACGAATCTTTGGTTATCCGCTTGGGCCGGCCCGGATCGAGTCGGTGAAT GGTGAGGCTGTTTTAGCACAACCGTTTGCGAACGTCATCATGCAGCAACCGCTCGGCAACACGGATCCAGCACAGATTTC TCTCCAGAAGATTGGATTGGAACGCCTCCTTCAACTCAAACAGGAACCCTCTCTGCCCCAATCTCCGCCAGAAACTCAAC GGGCAGGTTGTCGTTTCTTCAAGGAGACCGGATTTAACGTCTGTGATGAATTTAAGAATTTTTGGGAGAGCAATGGTCTG AACCTGGACGACAAGCGTGGCTACACTGACAGTGAACGGATTGCCCTCTTCGGGCTTCCAATTAGCAGCCAGAGACGTGA AACAGCGGCAAATGGTAGACAATACCCTACTCAGTGGTTCGAGCGCGCCCGATTACAGTACGACTCGGTTGCTGAAGAAA TGATCATCACTCCATTAGGTCGCGATGTTGTGGATAATCGACCCGGTGTTCCACCTCTACCACGTAACAAGGGCGTCCAG GTGAACGCAACAACCGTTACCGCCGGAGGCATCCTCTCCGCACGTGGCAATGGCTACACGAATGATCGGTCGGTAACCAT TACCGTGTTCCGTGCTGATGGCACCAGCTTTGCGGCAGGCACAGAGGTTACACCCGACACGAACGGCGTTACGGAACGGT ACTGCCTGGAAGTACCCGCCAATGCGCTACCCGGCATCTGGGCCATTGCTTTCAACGGTGTTCAAACCGGGCATCAGACG ATAGGTTTCTTCCGGGTAGTTACAACCGGCACCCCCAATACGACATGCCCTGATCTGATCGCACCGTTGCCCGGTAGTCG GTAG
Upstream 100 bases:
>100_bases GTCGAGGGTAATACTCCCCCCCTATTCACATAGACTCGATGTATCTATTCGGATGGATTCTATGTGAACCACTCTATCTG AGTTAATGAAAGGACCGCTT
Downstream 100 bases:
>100_bases TGACAAATGACGAATGTGACAACGATGACCTGCCGGGAGCCAGCAGGGATACACGGCGGTGCCCCCTACCAGTGCGATTC ATTACATGGCGATGTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MYRVTLVLAVFLVSTIISPASPGAASGSDPICFTDHEECVDPRFADFWRSNDAHAITGAKGNALRIFGYPLGPARIESVN GEAVLAQPFANVIMQQPLGNTDPAQISLQKIGLERLLQLKQEPSLPQSPPETQRAGCRFFKETGFNVCDEFKNFWESNGL NLDDKRGYTDSERIALFGLPISSQRRETAANGRQYPTQWFERARLQYDSVAEEMIITPLGRDVVDNRPGVPPLPRNKGVQ VNATTVTAGGILSARGNGYTNDRSVTITVFRADGTSFAAGTEVTPDTNGVTERYCLEVPANALPGIWAIAFNGVQTGHQT IGFFRVVTTGTPNTTCPDLIAPLPGSR
Sequences:
>Translated_347_residues MYRVTLVLAVFLVSTIISPASPGAASGSDPICFTDHEECVDPRFADFWRSNDAHAITGAKGNALRIFGYPLGPARIESVN GEAVLAQPFANVIMQQPLGNTDPAQISLQKIGLERLLQLKQEPSLPQSPPETQRAGCRFFKETGFNVCDEFKNFWESNGL NLDDKRGYTDSERIALFGLPISSQRRETAANGRQYPTQWFERARLQYDSVAEEMIITPLGRDVVDNRPGVPPLPRNKGVQ VNATTVTAGGILSARGNGYTNDRSVTITVFRADGTSFAAGTEVTPDTNGVTERYCLEVPANALPGIWAIAFNGVQTGHQT IGFFRVVTTGTPNTTCPDLIAPLPGSR >Mature_347_residues MYRVTLVLAVFLVSTIISPASPGAASGSDPICFTDHEECVDPRFADFWRSNDAHAITGAKGNALRIFGYPLGPARIESVN GEAVLAQPFANVIMQQPLGNTDPAQISLQKIGLERLLQLKQEPSLPQSPPETQRAGCRFFKETGFNVCDEFKNFWESNGL NLDDKRGYTDSERIALFGLPISSQRRETAANGRQYPTQWFERARLQYDSVAEEMIITPLGRDVVDNRPGVPPLPRNKGVQ VNATTVTAGGILSARGNGYTNDRSVTITVFRADGTSFAAGTEVTPDTNGVTERYCLEVPANALPGIWAIAFNGVQTGHQT IGFFRVVTTGTPNTTCPDLIAPLPGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37662; Mature: 37662
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRVTLVLAVFLVSTIISPASPGAASGSDPICFTDHEECVDPRFADFWRSNDAHAITGAK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHCCHHHHHHCCCCCCEEECCC GNALRIFGYPLGPARIESVNGEAVLAQPFANVIMQQPLGNTDPAQISLQKIGLERLLQLK CCEEEEEECCCCHHHEECCCCCEEEHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHH QEPSLPQSPPETQRAGCRFFKETGFNVCDEFKNFWESNGLNLDDKRGYTDSERIALFGLP HCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC ISSQRRETAANGRQYPTQWFERARLQYDSVAEEMIITPLGRDVVDNRPGVPPLPRNKGVQ CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEE VNATTVTAGGILSARGNGYTNDRSVTITVFRADGTSFAAGTEVTPDTNGVTERYCLEVPA EEEEEEEECCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHEEECCC NALPGIWAIAFNGVQTGHQTIGFFRVVTTGTPNTTCPDLIAPLPGSR CCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MYRVTLVLAVFLVSTIISPASPGAASGSDPICFTDHEECVDPRFADFWRSNDAHAITGAK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHCCHHHHHHCCCCCCEEECCC GNALRIFGYPLGPARIESVNGEAVLAQPFANVIMQQPLGNTDPAQISLQKIGLERLLQLK CCEEEEEECCCCHHHEECCCCCEEEHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHH QEPSLPQSPPETQRAGCRFFKETGFNVCDEFKNFWESNGLNLDDKRGYTDSERIALFGLP HCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC ISSQRRETAANGRQYPTQWFERARLQYDSVAEEMIITPLGRDVVDNRPGVPPLPRNKGVQ CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCEE VNATTVTAGGILSARGNGYTNDRSVTITVFRADGTSFAAGTEVTPDTNGVTERYCLEVPA EEEEEEEECCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHEEECCC NALPGIWAIAFNGVQTGHQTIGFFRVVTTGTPNTTCPDLIAPLPGSR CCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA