| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527339
Identifier: 222527339
GI number: 222527339
Start: 5109397
End: 5110353
Strand: Direct
Name: 222527339
Synonym: Chy400_4125
Alternate gene names: NA
Gene position: 5109397-5110353 (Clockwise)
Preceding gene: 222527338
Following gene: 222527340
Centisome position: 96.97
GC content: 51.52
Gene sequence:
>957_bases ATGAAATGCCGACAACTTGCAGTCTCCCGTCTAAATATCATGATCATTCTGGCAAGCACTCTCATAGGTATTACCATCCT GATCCTACTCATCCCAGGAGCTGCCGCGCAATCACCGCAAGGAACACCACTTTCGTGCAGTGATAGTCCGTTTGGCCGAG TGGTGGAATTGGGGAAAGAACGCGAGATCTTTGTCAGTTTTAAGGGAAGTCCCGATTTTCGCGGAACCAGCAATGGGCTA AATGCCTCTCTCAACAACCTCGGCGAGCCTCAGCAACCAGGAAATATCCAGCTTATCGAAGAAGGTCTTTTCGCCAATGA TGCCCAGAATCGCTACAACATCTCCTGGCTGGCTGCCACTGCTGCCGATCTCAATGGTGATGGTAAAGTGGAGTTTGTGC AGGGTTTTACTGATGCTATCGGGCGTACCCAGTTTGTCGTTCACGGCAATGGCAACGGCTGGAACGATGGTACGGACTGG AGTTGGAGCGATGGATACGGTTGGGTTGTCACCACCGTTGCTACTGAAACCAACTATATCGAGCGCGCAATGGCTGCCGG TGATGTGCTGGGCAGAGATAATGGCAGCCAGCAAATAGTTACTGCCGCTCGTGGCAATAATGCATTGAGAGTCAGTATCC GGGAAGGAGCAGCCAACGGCACGCTGAATGAAGTGGCTGCCTGGTCATCAAATGCCGAGAATCGCAATCAAGCGACATTG ATCGACGTAGCAGTAGGGAACCTGGATAACGACGGTTACCTGGACATCGTCGTGGCGTTTCTCCAGGAAAATACCAACAA TGTGCAGCTTGTCTACCTGGAATACGACCCCACTTATAACCAGGGCAGTGGATCAAACCTGAGCTTTCGGCTGCGTACAC GAGCGTTCATCACCACCGAGAATGTTTCCCACCCCAATAGATCTTCAGATCGATCTGGCCGATCTCAATGGCGATAG
Upstream 100 bases:
>100_bases CCATTTTCTCCTGAGCTGCATGGAAAGCGATGGCGAAAGTGGAAGCAATCGTGATTGATCTACGTCCACTACCACAACAC CCTAACACAGGAGGTATTCC
Downstream 100 bases:
>100_bases TCAAGACTCGGTGATACTGGCGTATAGTACGAGCCAAAACGATACGCCAGGGATTAGTCCAACCCTCCAGGTGTATACGT TTGATTTCAATACCAGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKCRQLAVSRLNIMIILASTLIGITILILLIPGAAAQSPQGTPLSCSDSPFGRVVELGKEREIFVSFKGSPDFRGTSNGL NASLNNLGEPQQPGNIQLIEEGLFANDAQNRYNISWLAATAADLNGDGKVEFVQGFTDAIGRTQFVVHGNGNGWNDGTDW SWSDGYGWVVTTVATETNYIERAMAAGDVLGRDNGSQQIVTAARGNNALRVSIREGAANGTLNEVAAWSSNAENRNQATL IDVAVGNLDNDGYLDIVVAFLQENTNNVQLVYLEYDPTYNQGSGSNLSFRLRTRAFITTENVSHPNRSSDRSGRSQWR
Sequences:
>Translated_318_residues MKCRQLAVSRLNIMIILASTLIGITILILLIPGAAAQSPQGTPLSCSDSPFGRVVELGKEREIFVSFKGSPDFRGTSNGL NASLNNLGEPQQPGNIQLIEEGLFANDAQNRYNISWLAATAADLNGDGKVEFVQGFTDAIGRTQFVVHGNGNGWNDGTDW SWSDGYGWVVTTVATETNYIERAMAAGDVLGRDNGSQQIVTAARGNNALRVSIREGAANGTLNEVAAWSSNAENRNQATL IDVAVGNLDNDGYLDIVVAFLQENTNNVQLVYLEYDPTYNQGSGSNLSFRLRTRAFITTENVSHPNRSSDRSGRSQWR >Mature_318_residues MKCRQLAVSRLNIMIILASTLIGITILILLIPGAAAQSPQGTPLSCSDSPFGRVVELGKEREIFVSFKGSPDFRGTSNGL NASLNNLGEPQQPGNIQLIEEGLFANDAQNRYNISWLAATAADLNGDGKVEFVQGFTDAIGRTQFVVHGNGNGWNDGTDW SWSDGYGWVVTTVATETNYIERAMAAGDVLGRDNGSQQIVTAARGNNALRVSIREGAANGTLNEVAAWSSNAENRNQATL IDVAVGNLDNDGYLDIVVAFLQENTNNVQLVYLEYDPTYNQGSGSNLSFRLRTRAFITTENVSHPNRSSDRSGRSQWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34420; Mature: 34420
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCRQLAVSRLNIMIILASTLIGITILILLIPGAAAQSPQGTPLSCSDSPFGRVVELGKE CCHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC REIFVSFKGSPDFRGTSNGLNASLNNLGEPQQPGNIQLIEEGLFANDAQNRYNISWLAAT CEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEE AADLNGDGKVEFVQGFTDAIGRTQFVVHGNGNGWNDGTDWSWSDGYGWVVTTVATETNYI EECCCCCCCEEEEHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHH ERAMAAGDVLGRDNGSQQIVTAARGNNALRVSIREGAANGTLNEVAAWSSNAENRNQATL HHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEE IDVAVGNLDNDGYLDIVVAFLQENTNNVQLVYLEYDPTYNQGSGSNLSFRLRTRAFITTE EEEEECCCCCCCHHHHHHEEHHCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEC NVSHPNRSSDRSGRSQWR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKCRQLAVSRLNIMIILASTLIGITILILLIPGAAAQSPQGTPLSCSDSPFGRVVELGKE CCHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC REIFVSFKGSPDFRGTSNGLNASLNNLGEPQQPGNIQLIEEGLFANDAQNRYNISWLAAT CEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEE AADLNGDGKVEFVQGFTDAIGRTQFVVHGNGNGWNDGTDWSWSDGYGWVVTTVATETNYI EECCCCCCCEEEEHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHH ERAMAAGDVLGRDNGSQQIVTAARGNNALRVSIREGAANGTLNEVAAWSSNAENRNQATL HHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEE IDVAVGNLDNDGYLDIVVAFLQENTNNVQLVYLEYDPTYNQGSGSNLSFRLRTRAFITTE EEEEECCCCCCCHHHHHHEEHHCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEC NVSHPNRSSDRSGRSQWR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA