| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527336
Identifier: 222527336
GI number: 222527336
Start: 5105069
End: 5105872
Strand: Direct
Name: 222527336
Synonym: Chy400_4122
Alternate gene names: NA
Gene position: 5105069-5105872 (Clockwise)
Preceding gene: 222527325
Following gene: 222527338
Centisome position: 96.89
GC content: 59.08
Gene sequence:
>804_bases ATGCCAGGCCCATTTCCCGGTATGGACCCCTATCTGGAACGGCCAGACCTCTGGCCTGACGTGCACCAGCGGCTGATTAC ATATATTGCTGACACACTTCAGCCCCAGCTTCGCCCGCGCTACCACGCCCGTATCGGGGAACGGCTGTACGTCATTCCAC CCCAACGGTCGGTGTACCAGGACGTGACCGTGACTCAACGACAGCCGGTGTCAATCCCGACAACGAGTGGCGGAACTGCG GTGCTGGTAGCCGACACCCCGCTGGTAATTATTGCACCCGCAGAACCTATCCGCGAGCCGTTTATCGAGCTTATTGACCT TGCTCAGGGTGGGCAAGTGGTTACCGTCATCGAAATACTCAGTCCGGCAAACAAGACCGCCGGTGAAGGGCACGATGTGT GCCAACGCAAGCAAGCTGAAGTCCTCGCCAGTGATACGCATCTCGTGGAGGTCGACTTGCTTCGCCAGGGGATGTATACC GTCGCTGTTCCGCTACCCTATCTGACCCCATTTCGGCCCTGGCACTATGTGGTCAGTGTCAGTCGGGCCGGACATCGTGG CCGGTTTGAGGTTTACTTACGCACAATCCGCCAGCGCTTGCCCCGGATTGCGATTCCCCTGCGCCCACCAGACCCCGATG TTGTGCTAGACCTTCAGGCAGTCTTTGATCGCTGTTACGACCACGGCGCGTATGCTGATCTGATCGATTACCGTGCCAAT CCCGACATCGCACTGCCTGCCGACGAGGTGGGCTGGGTGGATGAATATTTGCGCCAGCAAGGGCTGCGTGAAGGGGCGGT GTGA
Upstream 100 bases:
>100_bases CTATCCACTTACCACATCACACGCGCTTTTTCAGCCCTGCTACCTTCTTTCATGGTATCATCCTCGTAACACACCAAGTA GCAGGAGAGGAGGCATCTGG
Downstream 100 bases:
>100_bases CGATACGCTGACCAATTGGAGAACCCTTGCAACACTGCGTAGCAGTATGAACGGCAGCGCCTCGCTCAGGCATACCACAA ATATGGAGCTTTCAATAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPGPFPGMDPYLERPDLWPDVHQRLITYIADTLQPQLRPRYHARIGERLYVIPPQRSVYQDVTVTQRQPVSIPTTSGGTA VLVADTPLVIIAPAEPIREPFIELIDLAQGGQVVTVIEILSPANKTAGEGHDVCQRKQAEVLASDTHLVEVDLLRQGMYT VAVPLPYLTPFRPWHYVVSVSRAGHRGRFEVYLRTIRQRLPRIAIPLRPPDPDVVLDLQAVFDRCYDHGAYADLIDYRAN PDIALPADEVGWVDEYLRQQGLREGAV
Sequences:
>Translated_267_residues MPGPFPGMDPYLERPDLWPDVHQRLITYIADTLQPQLRPRYHARIGERLYVIPPQRSVYQDVTVTQRQPVSIPTTSGGTA VLVADTPLVIIAPAEPIREPFIELIDLAQGGQVVTVIEILSPANKTAGEGHDVCQRKQAEVLASDTHLVEVDLLRQGMYT VAVPLPYLTPFRPWHYVVSVSRAGHRGRFEVYLRTIRQRLPRIAIPLRPPDPDVVLDLQAVFDRCYDHGAYADLIDYRAN PDIALPADEVGWVDEYLRQQGLREGAV >Mature_266_residues PGPFPGMDPYLERPDLWPDVHQRLITYIADTLQPQLRPRYHARIGERLYVIPPQRSVYQDVTVTQRQPVSIPTTSGGTAV LVADTPLVIIAPAEPIREPFIELIDLAQGGQVVTVIEILSPANKTAGEGHDVCQRKQAEVLASDTHLVEVDLLRQGMYTV AVPLPYLTPFRPWHYVVSVSRAGHRGRFEVYLRTIRQRLPRIAIPLRPPDPDVVLDLQAVFDRCYDHGAYADLIDYRANP DIALPADEVGWVDEYLRQQGLREGAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30049; Mature: 29918
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPFPGMDPYLERPDLWPDVHQRLITYIADTLQPQLRPRYHARIGERLYVIPPQRSVYQ CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHCCHHHHHHHCCEEEEECCCHHHHH DVTVTQRQPVSIPTTSGGTAVLVADTPLVIIAPAEPIREPFIELIDLAQGGQVVTVIEIL CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEC SPANKTAGEGHDVCQRKQAEVLASDTHLVEVDLLRQGMYTVAVPLPYLTPFRPWHYVVSV CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCCEEEEECCCCCCCCCCCEEEEEE SRAGHRGRFEVYLRTIRQRLPRIAIPLRPPDPDVVLDLQAVFDRCYDHGAYADLIDYRAN ECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEHHHHHHHHHCCCCHHHHHHCCCC PDIALPADEVGWVDEYLRQQGLREGAV CCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGPFPGMDPYLERPDLWPDVHQRLITYIADTLQPQLRPRYHARIGERLYVIPPQRSVYQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHCCHHHHHHHCCEEEEECCCHHHHH DVTVTQRQPVSIPTTSGGTAVLVADTPLVIIAPAEPIREPFIELIDLAQGGQVVTVIEIL CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEC SPANKTAGEGHDVCQRKQAEVLASDTHLVEVDLLRQGMYTVAVPLPYLTPFRPWHYVVSV CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHCCCEEEEECCCCCCCCCCCEEEEEE SRAGHRGRFEVYLRTIRQRLPRIAIPLRPPDPDVVLDLQAVFDRCYDHGAYADLIDYRAN ECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEHHHHHHHHHCCCCHHHHHHCCCC PDIALPADEVGWVDEYLRQQGLREGAV CCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA