Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222527331
Identifier: 222527331
GI number: 222527331
Start: 5098458
End: 5098979
Strand: Reverse
Name: 222527331
Synonym: Chy400_4117
Alternate gene names: NA
Gene position: 5098979-5098458 (Counterclockwise)
Preceding gene: 222527332
Following gene: 222527330
Centisome position: 96.77
GC content: 53.07
Gene sequence:
>522_bases ATGGTGATTTGCAGCCACTGTCAGGCGCAACAACTCGATGGGACTATCTTCTGTACGGTTTGTGGTGCCAGTTTGATCCA TGCCAGGTCTACTCGCCAGACCACGGCCTCTCTGAATCGTGCGGCTGCTGAAGCTCCCCAATTGGACGGTGACGACGCTA CCATCGTGCCGGCGCCCGCTACCAAGACTGAAAGCGCAACGATTGCCCTGGTGGTTTTGAGTTCAGGACGGCGTATCGTT TTGCCGGTTACGTCTGAACTGGTCATTGGGCGTAAAGATCAACAACGGAACTTCTTTCCCGATGTTGATTTGAGTCTTGA TGGGGGCTACGATGCTGGTGTTTCGCGGCGCCATGCCCGTATTGTCTGTCACAATGGCAGCTATGTTCTCGAAGACCTGG GCAGTTCTAACGGAACGTTTTTGAATCGCCAACGGGTGTCACCGGATCGTCCTGTGCCGCTGCACCATGGTGACGAAATA CAGTTTGGTATGCTATTGGTGCGATTTGAAACAAACGGATAA
Upstream 100 bases:
>100_bases CGTTCCGGGCAGGCAAGTGCAGAAGGTCGCAAGCGGATTAAATACGGTACACGTGGCCTGATTGGGCGCGAAGGGCAATC GTAGTCTGGAGTGATGACCA
Downstream 100 bases:
>100_bases GACACATTCTTTGCGGAGGCTTCTGTATGCCGAAAACAGTCATTCTTCATCTCACCGGCGAAGATCCGCTGCTGGCCGAT ATCGATCAAGAGCCGCAGCC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein; FHA Domain Containing Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MVICSHCQAQQLDGTIFCTVCGASLIHARSTRQTTASLNRAAAEAPQLDGDDATIVPAPATKTESATIALVVLSSGRRIV LPVTSELVIGRKDQQRNFFPDVDLSLDGGYDAGVSRRHARIVCHNGSYVLEDLGSSNGTFLNRQRVSPDRPVPLHHGDEI QFGMLLVRFETNG
Sequences:
>Translated_173_residues MVICSHCQAQQLDGTIFCTVCGASLIHARSTRQTTASLNRAAAEAPQLDGDDATIVPAPATKTESATIALVVLSSGRRIV LPVTSELVIGRKDQQRNFFPDVDLSLDGGYDAGVSRRHARIVCHNGSYVLEDLGSSNGTFLNRQRVSPDRPVPLHHGDEI QFGMLLVRFETNG >Mature_173_residues MVICSHCQAQQLDGTIFCTVCGASLIHARSTRQTTASLNRAAAEAPQLDGDDATIVPAPATKTESATIALVVLSSGRRIV LPVTSELVIGRKDQQRNFFPDVDLSLDGGYDAGVSRRHARIVCHNGSYVLEDLGSSNGTFLNRQRVSPDRPVPLHHGDEI QFGMLLVRFETNG
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18655; Mature: 18655
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVICSHCQAQQLDGTIFCTVCGASLIHARSTRQTTASLNRAAAEAPQLDGDDATIVPAPA CEECCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCC TKTESATIALVVLSSGRRIVLPVTSELVIGRKDQQRNFFPDVDLSLDGGYDAGVSRRHAR CCCCCCEEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEE IVCHNGSYVLEDLGSSNGTFLNRQRVSPDRPVPLHHGDEIQFGMLLVRFETNG EEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC >Mature Secondary Structure MVICSHCQAQQLDGTIFCTVCGASLIHARSTRQTTASLNRAAAEAPQLDGDDATIVPAPA CEECCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCC TKTESATIALVVLSSGRRIVLPVTSELVIGRKDQQRNFFPDVDLSLDGGYDAGVSRRHAR CCCCCCEEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEEE IVCHNGSYVLEDLGSSNGTFLNRQRVSPDRPVPLHHGDEIQFGMLLVRFETNG EEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA