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The map label for this gene is ycjS [H]

Identifier: 222527309

GI number: 222527309

Start: 5066831

End: 5067865

Strand: Direct

Name: ycjS [H]

Synonym: Chy400_4094

Alternate gene names: 222527309

Gene position: 5066831-5067865 (Clockwise)

Preceding gene: 222527308

Following gene: 222527313

Centisome position: 96.16

GC content: 56.91

Gene sequence:

>1035_bases
ATGAAACAACACACACTGCGCGCTGCTGTTATCGGTGTCGGGAGCATGGGACGCAACCACGCCCGCGTCTACGCCACCAT
GCCAGATGTCGAGCTGGTTGCCGTCTGTGATACCAACTATGCAGCCGCCAGCAGCCTGGCAAACATCTACCGCTGCCGGA
TCTATACTGATTATCATGCCATGCTCGCCAACGAGGAGCTTGATCTGGTTTCGGTCGTTGTACCGACAAAACACCACTTT
GCCGTTGCCAGCGCTGCGATTGCCCGTGGTGTGCACGTTCTGGTCGAAAAACCGATTGCCGCAACGGTTGAGCAGGGCTG
GTTGTTGATCGAAGCTGCCCGTCGCCACGGTGTCATTCTTACGGTCGGACATATCGAACGCTTCAATCCGGCCATCATTG
CCCTGAAAGAACAACTCGACAACCACGAATTGGGCAACCTGTTTCAGATCACATCACGGCGCGTGGGGCCATTTCCGGGT
CGCATCGCCGATGTCGGTGTCGTCATCGACCTGGCCACCCACGAGATTGACATTCTCAATTATCTGATCGGCTCGCCGAT
TGTGCGTATGCACGTCGAACTTCATCGTCACATCCACCAGAGCCACGAAGACATGCTCTCGGCGTTACTCCGGTTTGAAA
ATGGCATGATCGGTATTCTCGACATCAACTGGCTGACGCCAACCAAGATCCGCGAGCTGAGCATTATCGGTGAGCGAGGG
ATGTTCGTTGCGAACTACCTGACCCAAGACCTGACCTTTTACGAAAACGACTCGTGTCAGGGCAAAGCCTGGCCGGAGCT
GGCGCTCCTTGGGGTGAGCGAGGGGCGTAGCATCCGGTTGAAAGTACCACGACGAGAACCACTCTACGAAGAACTACGCA
GCTTCTGCGAAGCCGTGCGCCACGAGACTGCACCACCGGTCAGCGGTGAAGCAGGTGTTGCTGCGCTTGAAATTGCCAAT
CAGATCGTCGATACCGGGTTGCGCGAACAACCCGCCGCCCGCCTGATCGAACGGGCACTGGCCGTTGGCGGCTAA

Upstream 100 bases:

>100_bases
ATCTGGCTTGACCTGCTGATCATCTATCGTACAATTCCGGCCCTGTTGAAGGGCGAAGGCGCATACTGAGACTACCTCGT
TCACCAGGGGGGAGGGCACC

Downstream 100 bases:

>100_bases
TAGAGGTGATACCAGCTCTTGCTCAAGGATGTGCCTCATTCCGGGTCCGTACTGAAGCATCACCACGAGCTGCTGGCAGG
TCATTGCAGACGAAGTGAAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKQHTLRAAVIGVGSMGRNHARVYATMPDVELVAVCDTNYAAASSLANIYRCRIYTDYHAMLANEELDLVSVVVPTKHHF
AVASAAIARGVHVLVEKPIAATVEQGWLLIEAARRHGVILTVGHIERFNPAIIALKEQLDNHELGNLFQITSRRVGPFPG
RIADVGVVIDLATHEIDILNYLIGSPIVRMHVELHRHIHQSHEDMLSALLRFENGMIGILDINWLTPTKIRELSIIGERG
MFVANYLTQDLTFYENDSCQGKAWPELALLGVSEGRSIRLKVPRREPLYEELRSFCEAVRHETAPPVSGEAGVAALEIAN
QIVDTGLREQPAARLIERALAVGG

Sequences:

>Translated_344_residues
MKQHTLRAAVIGVGSMGRNHARVYATMPDVELVAVCDTNYAAASSLANIYRCRIYTDYHAMLANEELDLVSVVVPTKHHF
AVASAAIARGVHVLVEKPIAATVEQGWLLIEAARRHGVILTVGHIERFNPAIIALKEQLDNHELGNLFQITSRRVGPFPG
RIADVGVVIDLATHEIDILNYLIGSPIVRMHVELHRHIHQSHEDMLSALLRFENGMIGILDINWLTPTKIRELSIIGERG
MFVANYLTQDLTFYENDSCQGKAWPELALLGVSEGRSIRLKVPRREPLYEELRSFCEAVRHETAPPVSGEAGVAALEIAN
QIVDTGLREQPAARLIERALAVGG
>Mature_344_residues
MKQHTLRAAVIGVGSMGRNHARVYATMPDVELVAVCDTNYAAASSLANIYRCRIYTDYHAMLANEELDLVSVVVPTKHHF
AVASAAIARGVHVLVEKPIAATVEQGWLLIEAARRHGVILTVGHIERFNPAIIALKEQLDNHELGNLFQITSRRVGPFPG
RIADVGVVIDLATHEIDILNYLIGSPIVRMHVELHRHIHQSHEDMLSALLRFENGMIGILDINWLTPTKIRELSIIGERG
MFVANYLTQDLTFYENDSCQGKAWPELALLGVSEGRSIRLKVPRREPLYEELRSFCEAVRHETAPPVSGEAGVAALEIAN
QIVDTGLREQPAARLIERALAVGG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=264, Percent_Identity=32.9545454545455, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87081947, Length=254, Percent_Identity=27.5590551181102, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38024; Mature: 38024

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHTLRAAVIGVGSMGRNHARVYATMPDVELVAVCDTNYAAASSLANIYRCRIYTDYHA
CCCHHEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHEEEEEEEECHHH
MLANEELDLVSVVVPTKHHFAVASAAIARGVHVLVEKPIAATVEQGWLLIEAARRHGVIL
HHCCCCCCEEEEEECCCHHHHHHHHHHHCCHHEEECCCHHHHHHCCEEEEEEHHHCCEEE
TVGHIERFNPAIIALKEQLDNHELGNLFQITSRRVGPFPGRIADVGVVIDLATHEIDILN
EECCCCCCCHHHEEEHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEEECHHHHHHHH
YLIGSPIVRMHVELHRHIHQSHEDMLSALLRFENGMIGILDINWLTPTKIRELSIIGERG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCC
MFVANYLTQDLTFYENDSCQGKAWPELALLGVSEGRSIRLKVPRREPLYEELRSFCEAVR
CHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHH
HETAPPVSGEAGVAALEIANQIVDTGLREQPAARLIERALAVGG
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQHTLRAAVIGVGSMGRNHARVYATMPDVELVAVCDTNYAAASSLANIYRCRIYTDYHA
CCCHHEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHHEEEEEEEECHHH
MLANEELDLVSVVVPTKHHFAVASAAIARGVHVLVEKPIAATVEQGWLLIEAARRHGVIL
HHCCCCCCEEEEEECCCHHHHHHHHHHHCCHHEEECCCHHHHHHCCEEEEEEHHHCCEEE
TVGHIERFNPAIIALKEQLDNHELGNLFQITSRRVGPFPGRIADVGVVIDLATHEIDILN
EECCCCCCCHHHEEEHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEEECHHHHHHHH
YLIGSPIVRMHVELHRHIHQSHEDMLSALLRFENGMIGILDINWLTPTKIRELSIIGERG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCC
MFVANYLTQDLTFYENDSCQGKAWPELALLGVSEGRSIRLKVPRREPLYEELRSFCEAVR
CHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHH
HETAPPVSGEAGVAALEIANQIVDTGLREQPAARLIERALAVGG
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]