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The map label for this gene is arnC [H]

Identifier: 222527303

GI number: 222527303

Start: 5060970

End: 5061725

Strand: Direct

Name: arnC [H]

Synonym: Chy400_4088

Alternate gene names: 222527303

Gene position: 5060970-5061725 (Clockwise)

Preceding gene: 222527302

Following gene: 222527304

Centisome position: 96.05

GC content: 57.01

Gene sequence:

>756_bases
GTGGCGTACTACGATTTTTCAATTGTGATTCCCTGTTATAACGAAGCTGAAGGTTTGCCGGCAATGCATAACCGGCTTAT
TCAGGCCCTGGATATGCTACGCGAACGCGGACGAACCCAGCTCGTGCTGGTCAATGATGGCAGTCGCGACGGAACGGGTG
ATCTCCTCGAACAGACATTTGGTGCCTGGCCCGATACCGTCATCGTTCACCATCCGACAAACCGTGGCCTGGGGGCAGCG
TTGCGTACCGGCTTTGCCAACGCCACCGGTGAAATCATCGTCACCTGTGATAGTGATGGCACCTATCCCTTCAGCGAAAT
ACCGGCCTTACTCGACCGGCTCACCCCCGACGTTGATCTGGTGACCGCTTCACCCTATCACGCTGGCGGTGGGATTGAAA
ACGTACCGGCCTACCGGGTCTTCATTAGCAAATCGGCTTCACTCTGCTACCGCATCCTGGTCGATGCACGGATTCACACC
TACACCGCGCTCTTCCGTGCCTGCCGGCGTCACGTGATCGAACACATTACCACCCACGCCGACGGCTTTCTGATGGTGAC
GGAGTGGCTGGTTGAAGCACTGCTGAGTGGTTACCGCGTCGCCGAGTATCCAACCACGCTGCGCGTGCGCCAGTATGGAC
AATCAAAGGCGCGGGTCTGGCAAATCACGAAAACCCACATTCGCTATATGAGCAGCATTCTCCAGCGCCGCTTCTTTGCC
CGACCGCAGACCAAAGCAATCTCGCGCAGTCGATAG

Upstream 100 bases:

>100_bases
GTTAGATCGAGGTTAGATAATTTATCCAGTATTTCAGCCAGCTTCCGAGCAATCATGCCAGCAATCCTCACCTTGATCGC
TCTTTTTGCAGGAGTAGACC

Downstream 100 bases:

>100_bases
CCCGACTGCCAGTCTATGGGGGGATCAATGCAACAGATTGACGAGCAAGTTATCAGGCAGACACCGCCGGCTGTCTCCAC
CGAGATCGAGCAGCCAACGC

Product: glycosyl transferase family 2 protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MAYYDFSIVIPCYNEAEGLPAMHNRLIQALDMLRERGRTQLVLVNDGSRDGTGDLLEQTFGAWPDTVIVHHPTNRGLGAA
LRTGFANATGEIIVTCDSDGTYPFSEIPALLDRLTPDVDLVTASPYHAGGGIENVPAYRVFISKSASLCYRILVDARIHT
YTALFRACRRHVIEHITTHADGFLMVTEWLVEALLSGYRVAEYPTTLRVRQYGQSKARVWQITKTHIRYMSSILQRRFFA
RPQTKAISRSR

Sequences:

>Translated_251_residues
MAYYDFSIVIPCYNEAEGLPAMHNRLIQALDMLRERGRTQLVLVNDGSRDGTGDLLEQTFGAWPDTVIVHHPTNRGLGAA
LRTGFANATGEIIVTCDSDGTYPFSEIPALLDRLTPDVDLVTASPYHAGGGIENVPAYRVFISKSASLCYRILVDARIHT
YTALFRACRRHVIEHITTHADGFLMVTEWLVEALLSGYRVAEYPTTLRVRQYGQSKARVWQITKTHIRYMSSILQRRFFA
RPQTKAISRSR
>Mature_250_residues
AYYDFSIVIPCYNEAEGLPAMHNRLIQALDMLRERGRTQLVLVNDGSRDGTGDLLEQTFGAWPDTVIVHHPTNRGLGAAL
RTGFANATGEIIVTCDSDGTYPFSEIPALLDRLTPDVDLVTASPYHAGGGIENVPAYRVFISKSASLCYRILVDARIHTY
TALFRACRRHVIEHITTHADGFLMVTEWLVEALLSGYRVAEYPTTLRVRQYGQSKARVWQITKTHIRYMSSILQRRFFAR
PQTKAISRSR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=217, Percent_Identity=29.4930875576037, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI1788588, Length=215, Percent_Identity=26.9767441860465, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=218, Percent_Identity=28.8990825688073, Blast_Score=95, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6325441, Length=242, Percent_Identity=26.8595041322314, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6325029, Length=223, Percent_Identity=28.2511210762332, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24585265, Length=219, Percent_Identity=29.2237442922374, Blast_Score=92, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 28277; Mature: 28146

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYDFSIVIPCYNEAEGLPAMHNRLIQALDMLRERGRTQLVLVNDGSRDGTGDLLEQTF
CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
GAWPDTVIVHHPTNRGLGAALRTGFANATGEIIVTCDSDGTYPFSEIPALLDRLTPDVDL
CCCCCCEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEE
VTASPYHAGGGIENVPAYRVFISKSASLCYRILVDARIHTYTALFRACRRHVIEHITTHA
EECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGFLMVTEWLVEALLSGYRVAEYPTTLRVRQYGQSKARVWQITKTHIRYMSSILQRRFFA
CCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
RPQTKAISRSR
CCCHHHHCCCC
>Mature Secondary Structure 
AYYDFSIVIPCYNEAEGLPAMHNRLIQALDMLRERGRTQLVLVNDGSRDGTGDLLEQTF
CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
GAWPDTVIVHHPTNRGLGAALRTGFANATGEIIVTCDSDGTYPFSEIPALLDRLTPDVDL
CCCCCCEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEE
VTASPYHAGGGIENVPAYRVFISKSASLCYRILVDARIHTYTALFRACRRHVIEHITTHA
EECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGFLMVTEWLVEALLSGYRVAEYPTTLRVRQYGQSKARVWQITKTHIRYMSSILQRRFFA
CCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
RPQTKAISRSR
CCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA