| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527299
Identifier: 222527299
GI number: 222527299
Start: 5055339
End: 5056862
Strand: Direct
Name: 222527299
Synonym: Chy400_4084
Alternate gene names: NA
Gene position: 5055339-5056862 (Clockwise)
Preceding gene: 222527298
Following gene: 222527300
Centisome position: 95.95
GC content: 59.78
Gene sequence:
>1524_bases ATGCACAAACAGCTCACGACCGATCTTCTACGACCAACGTCAGACCTGGTGCGTTTCGGTGAACGAGCAGCAACACTGCT CCTCGTCGTCATCATCGGGCTGCTCGCCCTGGTGAATCTGCCCTATGCACCGCGCACCTGGTTCGACGAGGGATCGCATC TGCACGTCCCGGAAACGCTTATCCGCTACGGTGTCTACGCCGACATCAGCAGCGAGGGCTTTCGCTATTTCGGCCCAACT ATCGGTGTTGGGCCGACGGTGATGCTACCGGTAGCGCTCGTCTTTCGCCTGGTTGGGGTTGATCTGCTGGCAGCACGCCT CGTCATCGTGGCCTATCTCTTCGCCACCCTCTGGCTCTTCTACCTGCTGGCACGACACCTGCACGGACGCTATCTGGCCC TGTTGACAGTCCTGCTTCTCATCGCGTCACGCACCCGTGGCTTTGAAGGGATGATCGAATATGGCCGCCAGGTATTGGGT GAGGTGCCTGGATTGGCCTGGCTTGGGATGGGGTTGTTGTTTTATGTCAAATCAATACTACAGCCAGCGCACCGCCGGCG CAGTGCCATCCTCGCCGGGATTGGCTTTGGGATGGCGCTGATTACCAAGAATCAGTTTGCCCTGATTGTGGCGCCCTCCC TCCTCATTCTGGTCCTTCTCGATTGGCGCTTCATGCGCGTAGGTGACTGGTGGTTGCGACTTGCCCCACCACTCATTGCC GGGAGTATGTTTGCCGGCTGGCTGCTGATCATGCTGGCATTTCTCGGCCCGGCTGATTTCAGTGCCAATCTGGCGAAAAC CCGCCAGGCAGCCGGTGGCGCGATCTTCGTCTTCGACGGCGAAGCCAGTCTTCGCGCTATCCGTTATCTGGTACAGGTGT ACGGTGGCTTGCTCATTCCGGCCCTGCTGTACAGCCTCTGGCGCTGCCGGCAGCGCAATGCCATGGCCTTTGCCGAGCTG ACCCTCACCGTGCCGGCAATACTCTGGATCGGCTGGTATCTGGTATCGCTCGGCTGGCCGCGCTACGCCTTCCCCGCCGT TGCCCTCGGCGCACCGGCAGTTGCCCGAATGATCGGCGATCTGCTTGCCTGGCTCTGGCAGCGTCGTCAACCGGTTCTGG CCGGTGCAGTTGGTGCCGGTCTGGCTCTAATCACCGGCTTCTCACTTAGCCTGACGGTCGGCGTGGTGCTTCGCCCTGAT GACTCTGCACAACGCATGGCTGCATTTCTCAATCAGGCTATCCCAACCGACGCCATCATCGAGACGTGGGAACCAGAGCT GGCTATTTTCACCGATCACACCTATCACTACGTTCCGACCGAACTCCTTGATGGCGCTGTTCGCCACGCCTGGCTCGGCG GATCACCGGTTGCTTACGATGGTTTGGACGCCAACCCGCCATACGTGCTCACCGGCCCATTCAGTGCGTATACCGGCATC TACGACCACGAACGTTTACAACGCGATTACGCACCGGTTTACAGTGCCGGCCCCTACACGATATGGCAGCGGCATACACC CTAA
Upstream 100 bases:
>100_bases CAGTATGTAGACACCACGATCCGTATTGTATGCCTGACCTGACAGTGGCCGGCGGGAATGCCCGCCGCGCCACCGGGTCG TTGTTGGCATCGAGGGAACC
Downstream 100 bases:
>100_bases GCAGAAAAGGTAGCCTTATGCGGCGCTTCTGGCTCATCGTGTTCCTGCTCTTCTGTAGTTATGCCTACATCCTGCCACGC TGGTCGGACTGGAACCAGAA
Product: 4-amino-4-deoxy-L-arabinose transferase-like protein
Products: NA
Alternate protein names: 4-Amino-4-Deoxy-L-Arabinose Transferase-Like Protein
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MHKQLTTDLLRPTSDLVRFGERAATLLLVVIIGLLALVNLPYAPRTWFDEGSHLHVPETLIRYGVYADISSEGFRYFGPT IGVGPTVMLPVALVFRLVGVDLLAARLVIVAYLFATLWLFYLLARHLHGRYLALLTVLLLIASRTRGFEGMIEYGRQVLG EVPGLAWLGMGLLFYVKSILQPAHRRRSAILAGIGFGMALITKNQFALIVAPSLLILVLLDWRFMRVGDWWLRLAPPLIA GSMFAGWLLIMLAFLGPADFSANLAKTRQAAGGAIFVFDGEASLRAIRYLVQVYGGLLIPALLYSLWRCRQRNAMAFAEL TLTVPAILWIGWYLVSLGWPRYAFPAVALGAPAVARMIGDLLAWLWQRRQPVLAGAVGAGLALITGFSLSLTVGVVLRPD DSAQRMAAFLNQAIPTDAIIETWEPELAIFTDHTYHYVPTELLDGAVRHAWLGGSPVAYDGLDANPPYVLTGPFSAYTGI YDHERLQRDYAPVYSAGPYTIWQRHTP
Sequences:
>Translated_507_residues MHKQLTTDLLRPTSDLVRFGERAATLLLVVIIGLLALVNLPYAPRTWFDEGSHLHVPETLIRYGVYADISSEGFRYFGPT IGVGPTVMLPVALVFRLVGVDLLAARLVIVAYLFATLWLFYLLARHLHGRYLALLTVLLLIASRTRGFEGMIEYGRQVLG EVPGLAWLGMGLLFYVKSILQPAHRRRSAILAGIGFGMALITKNQFALIVAPSLLILVLLDWRFMRVGDWWLRLAPPLIA GSMFAGWLLIMLAFLGPADFSANLAKTRQAAGGAIFVFDGEASLRAIRYLVQVYGGLLIPALLYSLWRCRQRNAMAFAEL TLTVPAILWIGWYLVSLGWPRYAFPAVALGAPAVARMIGDLLAWLWQRRQPVLAGAVGAGLALITGFSLSLTVGVVLRPD DSAQRMAAFLNQAIPTDAIIETWEPELAIFTDHTYHYVPTELLDGAVRHAWLGGSPVAYDGLDANPPYVLTGPFSAYTGI YDHERLQRDYAPVYSAGPYTIWQRHTP >Mature_507_residues MHKQLTTDLLRPTSDLVRFGERAATLLLVVIIGLLALVNLPYAPRTWFDEGSHLHVPETLIRYGVYADISSEGFRYFGPT IGVGPTVMLPVALVFRLVGVDLLAARLVIVAYLFATLWLFYLLARHLHGRYLALLTVLLLIASRTRGFEGMIEYGRQVLG EVPGLAWLGMGLLFYVKSILQPAHRRRSAILAGIGFGMALITKNQFALIVAPSLLILVLLDWRFMRVGDWWLRLAPPLIA GSMFAGWLLIMLAFLGPADFSANLAKTRQAAGGAIFVFDGEASLRAIRYLVQVYGGLLIPALLYSLWRCRQRNAMAFAEL TLTVPAILWIGWYLVSLGWPRYAFPAVALGAPAVARMIGDLLAWLWQRRQPVLAGAVGAGLALITGFSLSLTVGVVLRPD DSAQRMAAFLNQAIPTDAIIETWEPELAIFTDHTYHYVPTELLDGAVRHAWLGGSPVAYDGLDANPPYVLTGPFSAYTGI YDHERLQRDYAPVYSAGPYTIWQRHTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56056; Mature: 56056
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKQLTTDLLRPTSDLVRFGERAATLLLVVIIGLLALVNLPYAPRTWFDEGSHLHVPETL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHH IRYGVYADISSEGFRYFGPTIGVGPTVMLPVALVFRLVGVDLLAARLVIVAYLFATLWLF HHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLARHLHGRYLALLTVLLLIASRTRGFEGMIEYGRQVLGEVPGLAWLGMGLLFYVKSIL HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QPAHRRRSAILAGIGFGMALITKNQFALIVAPSLLILVLLDWRFMRVGDWWLRLAPPLIA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GSMFAGWLLIMLAFLGPADFSANLAKTRQAAGGAIFVFDGEASLRAIRYLVQVYGGLLIP HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH ALLYSLWRCRQRNAMAFAELTLTVPAILWIGWYLVSLGWPRYAFPAVALGAPAVARMIGD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHH LLAWLWQRRQPVLAGAVGAGLALITGFSLSLTVGVVLRPDDSAQRMAAFLNQAIPTDAII HHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHH ETWEPELAIFTDHTYHYVPTELLDGAVRHAWLGGSPVAYDGLDANPPYVLTGPFSAYTGI HCCCCCEEEEECCCCEECCHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCHHHHCCC YDHERLQRDYAPVYSAGPYTIWQRHTP HHHHHHHHHCCCCCCCCCCEECCCCCC >Mature Secondary Structure MHKQLTTDLLRPTSDLVRFGERAATLLLVVIIGLLALVNLPYAPRTWFDEGSHLHVPETL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHH IRYGVYADISSEGFRYFGPTIGVGPTVMLPVALVFRLVGVDLLAARLVIVAYLFATLWLF HHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLARHLHGRYLALLTVLLLIASRTRGFEGMIEYGRQVLGEVPGLAWLGMGLLFYVKSIL HHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QPAHRRRSAILAGIGFGMALITKNQFALIVAPSLLILVLLDWRFMRVGDWWLRLAPPLIA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GSMFAGWLLIMLAFLGPADFSANLAKTRQAAGGAIFVFDGEASLRAIRYLVQVYGGLLIP HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH ALLYSLWRCRQRNAMAFAELTLTVPAILWIGWYLVSLGWPRYAFPAVALGAPAVARMIGD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHH LLAWLWQRRQPVLAGAVGAGLALITGFSLSLTVGVVLRPDDSAQRMAAFLNQAIPTDAII HHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHH ETWEPELAIFTDHTYHYVPTELLDGAVRHAWLGGSPVAYDGLDANPPYVLTGPFSAYTGI HCCCCCEEEEECCCCEECCHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEECCHHHHCCC YDHERLQRDYAPVYSAGPYTIWQRHTP HHHHHHHHHCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA