| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is wbbL [H]
Identifier: 222527276
GI number: 222527276
Start: 5020150
End: 5021061
Strand: Direct
Name: wbbL [H]
Synonym: Chy400_4061
Alternate gene names: 222527276
Gene position: 5020150-5021061 (Clockwise)
Preceding gene: 222527275
Following gene: 222527277
Centisome position: 95.28
GC content: 57.57
Gene sequence:
>912_bases ATGAAACCACGGGTAGCCGTTATCGTCCTGACCTACAACGGTATTGCCGATACACTTGCCTGCCTGCAATCGCTGGCCCA GATGGTGTATCCAGGCGCATGTTACGACGTGGTCGTCGTTGACAACGCATCTACCGACGGCACACCGGCGCAGGTACGGG CAGCGTTTCCGAACACGATTGTCATCGAAAATAAGGCCAATCTCGGCTTTGCCGCCGGCAACAATGTTGGGTTACGCTAC GCTCAGACGCACGGCTACGACTACGCCCTCTTACTCAACAACGACACCGAAGTTGCGCCCGATCTCCTTGATCGTCTGGT AGAGGCGGCAGAAACCGATCAACGGATTGCCGCAGTGGGGCCAATCATCTACTACCACGCTGCCCCCAACCGCATCTGGT CGGCGGGTGGCAGCATCGACTGGCAACGGGGAATTTGCCGGATGCGGGGTGAAGAAGAGGATTGCGGGCAATATCCGGCT CGCATCGTTGATTTTGTCACCGGTTGCGCCATGCTCATCAGGGTCGCAGCGTTGCCGCGCATTGGCCTGCTCGATGAACG CTTCTTCATGTACTTTGAAGAGACCGAATGGTGTGTGCGGGCCAGTCGCGCCGGTTATGTCTGCTATTTTACGCCGGCAG CAAAGGTCTGGCATAAGATACCGCTCAATGCGCGCTTTGATCGCGAATACCTGGCGTATTACATGACACGCAATCGCTTA CTGTTCCTGCGGGCAACCAAAGCTGGCTGGCGCACCTGGATTGATGCGTTGATCGTGCAAGACTTACGCACCTACCTCAG TCTCTGTCTGCGCCCGAAATGGCGGACACGCAAAGGTCGGATTGGCATGCGGCTGGCCTGGATCGATTTCTGGCGTGGAC GGTTTGGGCCGGCGCCGGTGTTGGAAGGGTAG
Upstream 100 bases:
>100_bases GTATCCAACCACCACGAACATTTGCAGATGAGTTAAAGGAGATGTTGCAGCACTATACGACACTCAGCAAACGACGTACC ACAGTGTGAGGGATTGGTGC
Downstream 100 bases:
>100_bases CCGGTACAGGGCAAGGGGGATAGACTGATGCAACGCTCGCTCCGAATCGGTATTGATGTACGCTACCTCTCGCACGGCCT GGTCGGTGGTATTCACACCT
Product: glycosyl transferase family 2 protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKPRVAVIVLTYNGIADTLACLQSLAQMVYPGACYDVVVVDNASTDGTPAQVRAAFPNTIVIENKANLGFAAGNNVGLRY AQTHGYDYALLLNNDTEVAPDLLDRLVEAAETDQRIAAVGPIIYYHAAPNRIWSAGGSIDWQRGICRMRGEEEDCGQYPA RIVDFVTGCAMLIRVAALPRIGLLDERFFMYFEETEWCVRASRAGYVCYFTPAAKVWHKIPLNARFDREYLAYYMTRNRL LFLRATKAGWRTWIDALIVQDLRTYLSLCLRPKWRTRKGRIGMRLAWIDFWRGRFGPAPVLEG
Sequences:
>Translated_303_residues MKPRVAVIVLTYNGIADTLACLQSLAQMVYPGACYDVVVVDNASTDGTPAQVRAAFPNTIVIENKANLGFAAGNNVGLRY AQTHGYDYALLLNNDTEVAPDLLDRLVEAAETDQRIAAVGPIIYYHAAPNRIWSAGGSIDWQRGICRMRGEEEDCGQYPA RIVDFVTGCAMLIRVAALPRIGLLDERFFMYFEETEWCVRASRAGYVCYFTPAAKVWHKIPLNARFDREYLAYYMTRNRL LFLRATKAGWRTWIDALIVQDLRTYLSLCLRPKWRTRKGRIGMRLAWIDFWRGRFGPAPVLEG >Mature_303_residues MKPRVAVIVLTYNGIADTLACLQSLAQMVYPGACYDVVVVDNASTDGTPAQVRAAFPNTIVIENKANLGFAAGNNVGLRY AQTHGYDYALLLNNDTEVAPDLLDRLVEAAETDQRIAAVGPIIYYHAAPNRIWSAGGSIDWQRGICRMRGEEEDCGQYPA RIVDFVTGCAMLIRVAALPRIGLLDERFFMYFEETEWCVRASRAGYVCYFTPAAKVWHKIPLNARFDREYLAYYMTRNRL LFLRATKAGWRTWIDALIVQDLRTYLSLCLRPKWRTRKGRIGMRLAWIDFWRGRFGPAPVLEG
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34306; Mature: 34306
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRVAVIVLTYNGIADTLACLQSLAQMVYPGACYDVVVVDNASTDGTPAQVRAAFPNTI CCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCCEE VIENKANLGFAAGNNVGLRYAQTHGYDYALLLNNDTEVAPDLLDRLVEAAETDQRIAAVG EEECCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHC PIIYYHAAPNRIWSAGGSIDWQRGICRMRGEEEDCGQYPARIVDFVTGCAMLIRVAALPR CEEEEECCCCCEECCCCCCCHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IGLLDERFFMYFEETEWCVRASRAGYVCYFTPAAKVWHKIPLNARFDREYLAYYMTRNRL CCCCCHHHEEEECCCHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHCCEE LFLRATKAGWRTWIDALIVQDLRTYLSLCLRPKWRTRKGRIGMRLAWIDFWRGRFGPAPV EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCC LEG CCC >Mature Secondary Structure MKPRVAVIVLTYNGIADTLACLQSLAQMVYPGACYDVVVVDNASTDGTPAQVRAAFPNTI CCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCCEE VIENKANLGFAAGNNVGLRYAQTHGYDYALLLNNDTEVAPDLLDRLVEAAETDQRIAAVG EEECCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHC PIIYYHAAPNRIWSAGGSIDWQRGICRMRGEEEDCGQYPARIVDFVTGCAMLIRVAALPR CEEEEECCCCCEECCCCCCCHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC IGLLDERFFMYFEETEWCVRASRAGYVCYFTPAAKVWHKIPLNARFDREYLAYYMTRNRL CCCCCHHHEEEECCCHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHCCEE LFLRATKAGWRTWIDALIVQDLRTYLSLCLRPKWRTRKGRIGMRLAWIDFWRGRFGPAPV EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCC LEG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]