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The map label for this gene is yjbQ [H]

Identifier: 222527116

GI number: 222527116

Start: 4846402

End: 4848354

Strand: Reverse

Name: yjbQ [H]

Synonym: Chy400_3897

Alternate gene names: 222527116

Gene position: 4848354-4846402 (Counterclockwise)

Preceding gene: 222527118

Following gene: 222527113

Centisome position: 92.02

GC content: 56.32

Gene sequence:

>1953_bases
GTGCCCGCCGTTCAGTTTATTGCAAAGGAGGTTACCGGATTGCAGACACTGATCTACCTGGCTGGCTTTGCCCTGATTTG
TCTCGCATCGCACCGTATCGGACAGTGGTTTGCGCAGATACGCCTGCCGTACATTACGGGCTATCTCTTTACTGGTGTAT
TGGTTGGTTCATTTGGCTTACAACTCCTGCCCTCAAGCGCCGGCGAAAACCTGCGTTTCATCGATCAGATTGCGCTGGCG
GTGATTGCATTTGTTGCCGGGAGTGAGTTATTCTACAAAGACCTGCTCAGCCGTCTGCGTTCTATTCTGTGGTCGCTGGG
CATGATCATTGCTATCGCACTGGGTCTCATCGGCACCACGCTCTTTTTCCTGCTCGATATAATCCCATTCACGCAGGGGC
TGAATATCGGCGACAAGATCGCCGTCGCACTCCTGGGATCGACTATTCTGTTGGCGCTCTCTCCACCTTCAACCATTGCG
GTCATCAAAGAGCTGCGGGCGCGTGGCCCGGCAACCCGCCTGATCCTGGGCCTGACAGTGGCAATGGACGTTGCTATCAT
CGTGATCTTTGCGATCAGTTCGTCGTTTGCCGTAGCGCTGGTTGAGGGCAGCGGAGTTAATCTCGCCTTCCTCGCCTTGT
TACTGCTCGATCTGATCCTGTCGGGTATTGCCGGCTATGGTGTCGGTCAGGTGCTGCAAGTTATTTTACGCCAGAGCTGG
TCGCGATGGGTGAAGCTGACGCTTATTGTTGCCCTCGGTTACGGCATCTTTGCCGGTGCCGACTGGCTCAAGACGGTTTC
AGCAGCGAGCTGGTCGATCAAAATCGTAATTGAGCCGCTTCTCGTCGCGTTAATCAGTGGTTTCCTGATAACCAATTTCT
CGCCGTACCGTGATGAGTTTGCCGAATTGCTGCACGACATCAGTCCGGTTGTCTATGTTGCGTTCTTCACCATCACCGGC
CTGGGGCTTAAGCTTGATATTCTCTTGACGGCGCTGATCTTTGCTGCGGTTATCTTCCTCGTGCGCGCACTGGCAATCTT
TAGCGGGAGTATGCTGGGCCTGACGATTGCCGGTGAACCGTCACGCTTTCGGTCACTCCTCTGGCTGGGCTTGATAACGC
AGGCAGGCATTGCACTGGGTTTAGCGCGCGAAGCCTCGCTGCTGTTGCCGATGTCGGGCGATGCCTTTGCCACGTTGATC
ATTGCTGTGATCGTGCTGAATGAAATCTTCGGGCCGCTTACGTTGCGTTTTGCCCTGCAACGCCTGGGTGAAGCCAACCT
GCCTGAACCCGGCATTCGCGACGATGTTCGCGATGTCCTCATCCTCGGCGTCGAGCAGCAATCTATCGCCCTGGCTCGCC
AATTGAGTGCGCGGGGCTGGCAGGTACGGGTGGCGGATACGGATCGCGATCACGTGCAACGCCTGGCAGCCGAGGATGTG
GACGAGCGCTACATTCCAGAGGTTAGTTTGCAGACGTTGAGTGGCCTGATTACACGCGCTACTGATGCGGTGGTGGCTCT
GTTGGAAAAAGACGAAGACAATCTGCGCGCCTGCCAGATCGCACTGGAAAAGTTTGGCGTACCGCGCCTGATCGTGCGAC
CCAATCGCTCTGAATTGCGCGAGCAGTTCCGCGAGTTGGGTGCGATCATCGTCGATCCAGCGACGGCGATGGTGAACCTG
CTAGAGCAGGCGGTACGTGCGCCCCAATCCCTCTCGCTTCTCCTGCATACCGATCCGGTGTACGACGTGGTGCAGATGAC
CGTCACCAATCGCGAGATCGATGGTCGTCTGGTGCGCGATCTGCGGCTACCTGCTGATGTGTTGTTGCTTGAGATCAGCC
GTGATGGTCAGGCAATAGTCCCTCACGGCTACACCCGGCTACGCCACGGCGACGAGCTAACCATTGTCGGTAAGCCTGAT
AGCCTGCGTGAAGTAGGTCTACGAATAGGTTGA

Upstream 100 bases:

>100_bases
CCCATCCTCTGTGTCCTCCGTGTCTCTGTGGTGACAAAGGTAGCAACTTGGGTTATGGTAGACGCTCCACCTATACTCAC
CCAACATCACACGTCTGATC

Downstream 100 bases:

>100_bases
CATAAAATATTTTTAGTTCGCACCACCAATATCCTGCCGGGAGAGCGTGCGGTAGGCGCTGTAGCCAAAGATAGCACTGT
AGACTGCGACAATGATCAGC

Product: TrkA-C domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MPAVQFIAKEVTGLQTLIYLAGFALICLASHRIGQWFAQIRLPYITGYLFTGVLVGSFGLQLLPSSAGENLRFIDQIALA
VIAFVAGSELFYKDLLSRLRSILWSLGMIIAIALGLIGTTLFFLLDIIPFTQGLNIGDKIAVALLGSTILLALSPPSTIA
VIKELRARGPATRLILGLTVAMDVAIIVIFAISSSFAVALVEGSGVNLAFLALLLLDLILSGIAGYGVGQVLQVILRQSW
SRWVKLTLIVALGYGIFAGADWLKTVSAASWSIKIVIEPLLVALISGFLITNFSPYRDEFAELLHDISPVVYVAFFTITG
LGLKLDILLTALIFAAVIFLVRALAIFSGSMLGLTIAGEPSRFRSLLWLGLITQAGIALGLAREASLLLPMSGDAFATLI
IAVIVLNEIFGPLTLRFALQRLGEANLPEPGIRDDVRDVLILGVEQQSIALARQLSARGWQVRVADTDRDHVQRLAAEDV
DERYIPEVSLQTLSGLITRATDAVVALLEKDEDNLRACQIALEKFGVPRLIVRPNRSELREQFRELGAIIVDPATAMVNL
LEQAVRAPQSLSLLLHTDPVYDVVQMTVTNREIDGRLVRDLRLPADVLLLEISRDGQAIVPHGYTRLRHGDELTIVGKPD
SLREVGLRIG

Sequences:

>Translated_650_residues
MPAVQFIAKEVTGLQTLIYLAGFALICLASHRIGQWFAQIRLPYITGYLFTGVLVGSFGLQLLPSSAGENLRFIDQIALA
VIAFVAGSELFYKDLLSRLRSILWSLGMIIAIALGLIGTTLFFLLDIIPFTQGLNIGDKIAVALLGSTILLALSPPSTIA
VIKELRARGPATRLILGLTVAMDVAIIVIFAISSSFAVALVEGSGVNLAFLALLLLDLILSGIAGYGVGQVLQVILRQSW
SRWVKLTLIVALGYGIFAGADWLKTVSAASWSIKIVIEPLLVALISGFLITNFSPYRDEFAELLHDISPVVYVAFFTITG
LGLKLDILLTALIFAAVIFLVRALAIFSGSMLGLTIAGEPSRFRSLLWLGLITQAGIALGLAREASLLLPMSGDAFATLI
IAVIVLNEIFGPLTLRFALQRLGEANLPEPGIRDDVRDVLILGVEQQSIALARQLSARGWQVRVADTDRDHVQRLAAEDV
DERYIPEVSLQTLSGLITRATDAVVALLEKDEDNLRACQIALEKFGVPRLIVRPNRSELREQFRELGAIIVDPATAMVNL
LEQAVRAPQSLSLLLHTDPVYDVVQMTVTNREIDGRLVRDLRLPADVLLLEISRDGQAIVPHGYTRLRHGDELTIVGKPD
SLREVGLRIG
>Mature_649_residues
PAVQFIAKEVTGLQTLIYLAGFALICLASHRIGQWFAQIRLPYITGYLFTGVLVGSFGLQLLPSSAGENLRFIDQIALAV
IAFVAGSELFYKDLLSRLRSILWSLGMIIAIALGLIGTTLFFLLDIIPFTQGLNIGDKIAVALLGSTILLALSPPSTIAV
IKELRARGPATRLILGLTVAMDVAIIVIFAISSSFAVALVEGSGVNLAFLALLLLDLILSGIAGYGVGQVLQVILRQSWS
RWVKLTLIVALGYGIFAGADWLKTVSAASWSIKIVIEPLLVALISGFLITNFSPYRDEFAELLHDISPVVYVAFFTITGL
GLKLDILLTALIFAAVIFLVRALAIFSGSMLGLTIAGEPSRFRSLLWLGLITQAGIALGLAREASLLLPMSGDAFATLII
AVIVLNEIFGPLTLRFALQRLGEANLPEPGIRDDVRDVLILGVEQQSIALARQLSARGWQVRVADTDRDHVQRLAAEDVD
ERYIPEVSLQTLSGLITRATDAVVALLEKDEDNLRACQIALEKFGVPRLIVRPNRSELREQFRELGAIIVDPATAMVNLL
EQAVRAPQSLSLLLHTDPVYDVVQMTVTNREIDGRLVRDLRLPADVLLLEISRDGQAIVPHGYTRLRHGDELTIVGKPDS
LREVGLRIG

Specific function: Probable Na(+)/H(+) antiporter [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 70549; Mature: 70418

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVQFIAKEVTGLQTLIYLAGFALICLASHRIGQWFAQIRLPYITGYLFTGVLVGSFGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLPSSAGENLRFIDQIALAVIAFVAGSELFYKDLLSRLRSILWSLGMIIAIALGLIGTT
HCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFLLDIIPFTQGLNIGDKIAVALLGSTILLALSPPSTIAVIKELRARGPATRLILGLTV
HHHHHHHHHHHCCCCCCHHHHHHHHCCHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHH
AMDVAIIVIFAISSSFAVALVEGSGVNLAFLALLLLDLILSGIAGYGVGQVLQVILRQSW
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SRWVKLTLIVALGYGIFAGADWLKTVSAASWSIKIVIEPLLVALISGFLITNFSPYRDEF
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH
AELLHDISPVVYVAFFTITGLGLKLDILLTALIFAAVIFLVRALAIFSGSMLGLTIAGEP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH
SRFRSLLWLGLITQAGIALGLAREASLLLPMSGDAFATLIIAVIVLNEIFGPLTLRFALQ
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGEANLPEPGIRDDVRDVLILGVEQQSIALARQLSARGWQVRVADTDRDHVQRLAAEDV
HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
DERYIPEVSLQTLSGLITRATDAVVALLEKDEDNLRACQIALEKFGVPRLIVRPNRSELR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH
EQFRELGAIIVDPATAMVNLLEQAVRAPQSLSLLLHTDPVYDVVQMTVTNREIDGRLVRD
HHHHHCCCEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHH
LRLPADVLLLEISRDGQAIVPHGYTRLRHGDELTIVGKPDSLREVGLRIG
HCCCHHHEEEEECCCCCEECCCCHHHHCCCCEEEEEECCHHHHHHCCCCC
>Mature Secondary Structure 
PAVQFIAKEVTGLQTLIYLAGFALICLASHRIGQWFAQIRLPYITGYLFTGVLVGSFGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLPSSAGENLRFIDQIALAVIAFVAGSELFYKDLLSRLRSILWSLGMIIAIALGLIGTT
HCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFLLDIIPFTQGLNIGDKIAVALLGSTILLALSPPSTIAVIKELRARGPATRLILGLTV
HHHHHHHHHHHCCCCCCHHHHHHHHCCHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHH
AMDVAIIVIFAISSSFAVALVEGSGVNLAFLALLLLDLILSGIAGYGVGQVLQVILRQSW
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SRWVKLTLIVALGYGIFAGADWLKTVSAASWSIKIVIEPLLVALISGFLITNFSPYRDEF
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHH
AELLHDISPVVYVAFFTITGLGLKLDILLTALIFAAVIFLVRALAIFSGSMLGLTIAGEP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH
SRFRSLLWLGLITQAGIALGLAREASLLLPMSGDAFATLIIAVIVLNEIFGPLTLRFALQ
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGEANLPEPGIRDDVRDVLILGVEQQSIALARQLSARGWQVRVADTDRDHVQRLAAEDV
HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCC
DERYIPEVSLQTLSGLITRATDAVVALLEKDEDNLRACQIALEKFGVPRLIVRPNRSELR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCHHHHH
EQFRELGAIIVDPATAMVNLLEQAVRAPQSLSLLLHTDPVYDVVQMTVTNREIDGRLVRD
HHHHHCCCEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHH
LRLPADVLLLEISRDGQAIVPHGYTRLRHGDELTIVGKPDSLREVGLRIG
HCCCHHHEEEEECCCCCEECCCCHHHHCCCCEEEEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]