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The map label for this gene is yngJ [H]

Identifier: 222527084

GI number: 222527084

Start: 4808691

End: 4809839

Strand: Direct

Name: yngJ [H]

Synonym: Chy400_3863

Alternate gene names: 222527084

Gene position: 4808691-4809839 (Clockwise)

Preceding gene: 222527083

Following gene: 222527085

Centisome position: 91.26

GC content: 59.18

Gene sequence:

>1149_bases
ATGGACGTTGAATTAACCCCAGAACAGCAGTTTATTCGGCAAACGGTGCGTGAATTCGCCGAAAAAGAGATCGCGCCGAA
AGCGCGATATGTCGATGAGCATAGTGCATTTCCAAGCGAAACCTTCGCCAAAATGGCCCAGCTCGGCCTGATGGGGCTGC
CTTTTCCCGAAGAGTACGGCGGTGCCGGTGCCGATAGTGTCAGCACCGCTATCGCCATCGAGGAAGTTGCTCGCTGCTGT
GGCAGCACGGCGCTTGCCTACGCTGCCCATCTCGGTCTGGGTAGTGCCCCAATTGCGATGTTCGGCACTGAAGAACAGAA
ACGGCGCTTTCTCGTACCGGCTGCCAAAGGTGAGTATCTGGCAGCGTTCGGTCTGACCGAACCGCACGCCGGTTCAGACG
CCGGTGCCACACGCACCACTGCCCGCCTGGTCGGCGACGAGTGGGTGATCAACGGCCAGAAGATGTGGATCACGAATGCC
CCCATCGCCGGCCACATCATCGTGACCGCCGTGACCGACCCCGATCTGGGTAAGAAGGGTATCTCGGCGTTTATCGTTCC
CCGTGGCACCCCAGGGCTAAGCTTCGGCAAGCACGAACCGAAGATGGGGTTACGTGGTTCGGTAAGTACTGCGGTGATGC
TTGACGATGTGCGTGTTCCCCGGGAAAATCTGCTCGGTGAGCGCGGACGCGGATTCATCCAGTTTTTACAGGTTCTCGAC
GGTGGTCGGATTGGGATCGGGGCGATGGCGATCGGCCTGGCTCAGGCCGCCTACGAGGCTGCGGTAGCCTATGCCCGCGA
ACGAACGGCGTTTGGCAAACCGATTGGCGCTCATCAGTCGGTTGCGAATATGATTGCCAATATGGCGGTTGATCTGGCCG
CAGCACGTGCGCTGGTCTACGGCGCGGCCCGCCTGAAAGATGCCGGTCGCCCCTATACCCGCGAGGCAGCGATTGCCAAA
CTCTTTGCCTCGGAAGCGTCAGAGCGTATCTGTCGCGATGCCATTCAAGTCTTTGGTGGTTATGGCTACAGCCAGGAGTA
TCCGGTGGAACGTCTCTACCGTGATACCCGCCTGTTGACCATTGGCGAAGGAACGTCGGAAATCTTGCGTGGAGTTATCG
CCCATTCCGTTCTTGGCCTGCGCGGATAG

Upstream 100 bases:

>100_bases
TGGTGGAGACGATGGAAGGTGTGCCGGCGATGGCATTTGAGGCGGATGTGCAAAGCCAGGCAGCGCATAGCTAGGCCAGC
ATACTAGAGAGGATTTCAAC

Downstream 100 bases:

>100_bases
CAGCTTGTGCTACAATGGAGGAACGAACGATAGCTTGCTATTGCCTGTGAGGTCTCAGACGAGGAAGTAGTATGACGCAG
AGCCAGCCCGAGACCGACCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MDVELTPEQQFIRQTVREFAEKEIAPKARYVDEHSAFPSETFAKMAQLGLMGLPFPEEYGGAGADSVSTAIAIEEVARCC
GSTALAYAAHLGLGSAPIAMFGTEEQKRRFLVPAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGDEWVINGQKMWITNA
PIAGHIIVTAVTDPDLGKKGISAFIVPRGTPGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGFIQFLQVLD
GGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMAVDLAAARALVYGAARLKDAGRPYTREAAIAK
LFASEASERICRDAIQVFGGYGYSQEYPVERLYRDTRLLTIGEGTSEILRGVIAHSVLGLRG

Sequences:

>Translated_382_residues
MDVELTPEQQFIRQTVREFAEKEIAPKARYVDEHSAFPSETFAKMAQLGLMGLPFPEEYGGAGADSVSTAIAIEEVARCC
GSTALAYAAHLGLGSAPIAMFGTEEQKRRFLVPAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGDEWVINGQKMWITNA
PIAGHIIVTAVTDPDLGKKGISAFIVPRGTPGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGFIQFLQVLD
GGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMAVDLAAARALVYGAARLKDAGRPYTREAAIAK
LFASEASERICRDAIQVFGGYGYSQEYPVERLYRDTRLLTIGEGTSEILRGVIAHSVLGLRG
>Mature_382_residues
MDVELTPEQQFIRQTVREFAEKEIAPKARYVDEHSAFPSETFAKMAQLGLMGLPFPEEYGGAGADSVSTAIAIEEVARCC
GSTALAYAAHLGLGSAPIAMFGTEEQKRRFLVPAAKGEYLAAFGLTEPHAGSDAGATRTTARLVGDEWVINGQKMWITNA
PIAGHIIVTAVTDPDLGKKGISAFIVPRGTPGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGFIQFLQVLD
GGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMAVDLAAARALVYGAARLKDAGRPYTREAAIAK
LFASEASERICRDAIQVFGGYGYSQEYPVERLYRDTRLLTIGEGTSEILRGVIAHSVLGLRG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=376, Percent_Identity=49.2021276595745, Blast_Score=353, Evalue=1e-97,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=41.2868632707775, Blast_Score=291, Evalue=8e-79,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=36, Blast_Score=258, Evalue=7e-69,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=38.6666666666667, Blast_Score=256, Evalue=4e-68,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=38.6666666666667, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI21361497, Length=379, Percent_Identity=39.3139841688654, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=36.5333333333333, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=36.094674556213, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=32.8042328042328, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI76496475, Length=393, Percent_Identity=35.1145038167939, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI4557235, Length=393, Percent_Identity=35.1145038167939, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI4503943, Length=386, Percent_Identity=29.2746113989637, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI7669494, Length=356, Percent_Identity=30.3370786516854, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI48976061, Length=406, Percent_Identity=30.7881773399015, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI211971008, Length=406, Percent_Identity=30.7881773399015, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI38505218, Length=385, Percent_Identity=29.6103896103896, Blast_Score=133, Evalue=3e-31,
Organism=Escherichia coli, GI87081958, Length=381, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=9e-50,
Organism=Escherichia coli, GI1786223, Length=379, Percent_Identity=29.287598944591, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI87082384, Length=263, Percent_Identity=29.277566539924, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87081702, Length=398, Percent_Identity=26.1306532663317, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=374, Percent_Identity=40.6417112299465, Blast_Score=284, Evalue=6e-77,
Organism=Caenorhabditis elegans, GI17506239, Length=370, Percent_Identity=40.5405405405405, Blast_Score=277, Evalue=9e-75,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=37.3333333333333, Blast_Score=275, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI17570075, Length=381, Percent_Identity=39.6325459317585, Blast_Score=273, Evalue=8e-74,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=38.4816753926702, Blast_Score=261, Evalue=5e-70,
Organism=Caenorhabditis elegans, GI17534899, Length=381, Percent_Identity=39.1076115485564, Blast_Score=259, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI71990804, Length=276, Percent_Identity=43.8405797101449, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI71985184, Length=385, Percent_Identity=36.3636363636364, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17533517, Length=380, Percent_Identity=32.3684210526316, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17551932, Length=366, Percent_Identity=30.327868852459, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17505929, Length=370, Percent_Identity=31.0810810810811, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17534353, Length=383, Percent_Identity=28.9817232375979, Blast_Score=178, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=41.1255411255411, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71982178, Length=268, Percent_Identity=34.7014925373134, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71985192, Length=314, Percent_Identity=35.3503184713376, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17531909, Length=240, Percent_Identity=34.5833333333333, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17531913, Length=176, Percent_Identity=32.9545454545455, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=329, Percent_Identity=27.6595744680851, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=267, Percent_Identity=26.5917602996255, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=267, Percent_Identity=26.5917602996255, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=46.524064171123, Blast_Score=335, Evalue=3e-92,
Organism=Drosophila melanogaster, GI24646207, Length=375, Percent_Identity=46.4, Blast_Score=326, Evalue=2e-89,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=37.8016085790885, Blast_Score=274, Evalue=6e-74,
Organism=Drosophila melanogaster, GI24660351, Length=376, Percent_Identity=40.1595744680851, Blast_Score=271, Evalue=7e-73,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=36.1477572559367, Blast_Score=240, Evalue=9e-64,
Organism=Drosophila melanogaster, GI281363737, Length=388, Percent_Identity=35.0515463917526, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI19920834, Length=384, Percent_Identity=31.5104166666667, Blast_Score=172, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40731; Mature: 40731

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVELTPEQQFIRQTVREFAEKEIAPKARYVDEHSAFPSETFAKMAQLGLMGLPFPEEYG
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCHHHC
GAGADSVSTAIAIEEVARCCGSTALAYAAHLGLGSAPIAMFGTEEQKRRFLVPAAKGEYL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCHHHHCEEECCCCCCCEE
AAFGLTEPHAGSDAGATRTTARLVGDEWVINGQKMWITNAPIAGHIIVTAVTDPDLGKKG
EEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCEEEEECCCCCCEEEEEEECCCCCCCCC
ISAFIVPRGTPGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGFIQFLQVLD
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHHC
GGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMAVDLAAARALVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAARLKDAGRPYTREAAIAKLFASEASERICRDAIQVFGGYGYSQEYPVERLYRDTRLLT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEE
IGEGTSEILRGVIAHSVLGLRG
ECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVELTPEQQFIRQTVREFAEKEIAPKARYVDEHSAFPSETFAKMAQLGLMGLPFPEEYG
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCHHHC
GAGADSVSTAIAIEEVARCCGSTALAYAAHLGLGSAPIAMFGTEEQKRRFLVPAAKGEYL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCHHHHCEEECCCCCCCEE
AAFGLTEPHAGSDAGATRTTARLVGDEWVINGQKMWITNAPIAGHIIVTAVTDPDLGKKG
EEECCCCCCCCCCCCCHHHHHHHHCCCEEECCCEEEEECCCCCCEEEEEEECCCCCCCCC
ISAFIVPRGTPGLSFGKHEPKMGLRGSVSTAVMLDDVRVPRENLLGERGRGFIQFLQVLD
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHHC
GGRIGIGAMAIGLAQAAYEAAVAYARERTAFGKPIGAHQSVANMIANMAVDLAAARALVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAARLKDAGRPYTREAAIAKLFASEASERICRDAIQVFGGYGYSQEYPVERLYRDTRLLT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEE
IGEGTSEILRGVIAHSVLGLRG
ECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]