| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527075
Identifier: 222527075
GI number: 222527075
Start: 4800484
End: 4801956
Strand: Direct
Name: 222527075
Synonym: Chy400_3854
Alternate gene names: NA
Gene position: 4800484-4801956 (Clockwise)
Preceding gene: 222527074
Following gene: 222527076
Centisome position: 91.11
GC content: 52.75
Gene sequence:
>1473_bases TTGTATCGACATCGTCTCATCTTTGTCCTGGTAATGTGGTTGATCGCCATTGCATTACCCGCAGCGGCCCAAACCCCAAC CAACATCTCAACCATCTATCTCCCATTGGTATCGGCAAACACCATTCGTCCACTCGGTTTTGAAACAAACACTGGCTGGC TCTCTGCATCTAGTGTCTATCCCCAGGCTGCCAACCTCAATGCCCATTGGGTTCGGCTCAATACCCTGAGCTGGCGCGAA GCTCAGCCTACCATGGGATCATCGATTAATTGGAGTGCGCCCAGCTTTACGCGCTTTGAAGCCGAAGTAGCGGCTGCCAA TGCCCTTGGCCTGCAAGTTATGGCCATCATCGATGACCATCCATCGTGGGCGACAGGGAGTAATCACATCTGTGCCGCCA TCCTCGATCAATATCATGATGAATTCGCAGCCTTTGTCCGAGCCGTGGTTGCAAAATACAGTCAGGCACCACACTACGTG CGCTATTGGGAGTTGGGCAACGAGCCAGATGTCGATCCCAGACTGGTTGGCGAGAACTCACCATTTGGCTGTTGGGGTGT CATTGAGGATGAATACTACGGCGGTGAACGGTATGGACGGATGTTGATGACAGTGACGCCACAAATCCGTGCTGCCGATC CGGGAGCCAAAGTCGTTTTTGGCGGTTTATTACTGGCAAGACCGCAAAACGGCCCAAATAACAACGACGGTAAGCCATTC AATTTTCTCGAAGGGGCATTACGAGCGGGTGCGGGACCTTATTTCGATATCCTTGCTTTTCACTCCTACCCGACCTACTT TGAAGAAATTGGGGTGAATAATGCCCATGTCGATTTCGACAAACATCCGATAACGTTCGGTGGTGCATGGGCATCGCGTG GCGGGGCCACGCTGGGCAAGATAAACTTCTTGCGCGACGTAATGCAGCGTTATGGCATCAATAAACCTCTGTTCCTCAAT GAAACCGGTTTGTTGTGTGATGACAGGTACACCTCTTATGTCCCGGTTTCCGGTAGTTGTAATGCAGCAGCCCCGACCCT TCAGCAGGCACAAGCCAATCACCTGATCCGCTCATCAATGCGTGCGATAGCGGCCGGTGTTGAGACGTACATCTGGTATA CCTTGCAAGGGCCAGGGTGGCGTCACGCAGGCTTGCTCGACGGAAGCCAACAACCACGCCCGGCATATATTGCGATGAAA ACGGCCATTGAGCGTCTCAATGAGGTACGCATTCCGCCGCAAGCCTTCACCGGGTACGGCACCGGTTTTGAAGCCTACCG CTTCAGCGGCAATGGCTTTGTGCTCGATGTGGTCTGGTCGGTTGATGATACGCTCCGCCAGATTACGCTACCGGCCAGTT CGTTTATCGCCGCCTATACCCGTGATGGCGCACCAATTGTACCTACCATATCAGGTGGTACCGCAACACTTAACGTCGGT TTTGAGAATATCTATCTGAAACGAAAGCCATAG
Upstream 100 bases:
>100_bases CCATCTCACACGGAGGCATCTATACAATCGAACAGCGCCAGACATGCACGAACATCTGGTTACCGATGATTCAACGTTAG CTGCACAGTGAGGTGACATC
Downstream 100 bases:
>100_bases GTAGACGCGAGGATCTATTGCTCTGGTTGTCGTGCTAGGGTGTGCTGAAACAGGGTCGAATCCCTTGACGCGACCAGATC GATCCGGTACACTACCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MYRHRLIFVLVMWLIAIALPAAAQTPTNISTIYLPLVSANTIRPLGFETNTGWLSASSVYPQAANLNAHWVRLNTLSWRE AQPTMGSSINWSAPSFTRFEAEVAAANALGLQVMAIIDDHPSWATGSNHICAAILDQYHDEFAAFVRAVVAKYSQAPHYV RYWELGNEPDVDPRLVGENSPFGCWGVIEDEYYGGERYGRMLMTVTPQIRAADPGAKVVFGGLLLARPQNGPNNNDGKPF NFLEGALRAGAGPYFDILAFHSYPTYFEEIGVNNAHVDFDKHPITFGGAWASRGGATLGKINFLRDVMQRYGINKPLFLN ETGLLCDDRYTSYVPVSGSCNAAAPTLQQAQANHLIRSSMRAIAAGVETYIWYTLQGPGWRHAGLLDGSQQPRPAYIAMK TAIERLNEVRIPPQAFTGYGTGFEAYRFSGNGFVLDVVWSVDDTLRQITLPASSFIAAYTRDGAPIVPTISGGTATLNVG FENIYLKRKP
Sequences:
>Translated_490_residues MYRHRLIFVLVMWLIAIALPAAAQTPTNISTIYLPLVSANTIRPLGFETNTGWLSASSVYPQAANLNAHWVRLNTLSWRE AQPTMGSSINWSAPSFTRFEAEVAAANALGLQVMAIIDDHPSWATGSNHICAAILDQYHDEFAAFVRAVVAKYSQAPHYV RYWELGNEPDVDPRLVGENSPFGCWGVIEDEYYGGERYGRMLMTVTPQIRAADPGAKVVFGGLLLARPQNGPNNNDGKPF NFLEGALRAGAGPYFDILAFHSYPTYFEEIGVNNAHVDFDKHPITFGGAWASRGGATLGKINFLRDVMQRYGINKPLFLN ETGLLCDDRYTSYVPVSGSCNAAAPTLQQAQANHLIRSSMRAIAAGVETYIWYTLQGPGWRHAGLLDGSQQPRPAYIAMK TAIERLNEVRIPPQAFTGYGTGFEAYRFSGNGFVLDVVWSVDDTLRQITLPASSFIAAYTRDGAPIVPTISGGTATLNVG FENIYLKRKP >Mature_490_residues MYRHRLIFVLVMWLIAIALPAAAQTPTNISTIYLPLVSANTIRPLGFETNTGWLSASSVYPQAANLNAHWVRLNTLSWRE AQPTMGSSINWSAPSFTRFEAEVAAANALGLQVMAIIDDHPSWATGSNHICAAILDQYHDEFAAFVRAVVAKYSQAPHYV RYWELGNEPDVDPRLVGENSPFGCWGVIEDEYYGGERYGRMLMTVTPQIRAADPGAKVVFGGLLLARPQNGPNNNDGKPF NFLEGALRAGAGPYFDILAFHSYPTYFEEIGVNNAHVDFDKHPITFGGAWASRGGATLGKINFLRDVMQRYGINKPLFLN ETGLLCDDRYTSYVPVSGSCNAAAPTLQQAQANHLIRSSMRAIAAGVETYIWYTLQGPGWRHAGLLDGSQQPRPAYIAMK TAIERLNEVRIPPQAFTGYGTGFEAYRFSGNGFVLDVVWSVDDTLRQITLPASSFIAAYTRDGAPIVPTISGGTATLNVG FENIYLKRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53840; Mature: 53840
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRHRLIFVLVMWLIAIALPAAAQTPTNISTIYLPLVSANTIRPLGFETNTGWLSASSVY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCC PQAANLNAHWVRLNTLSWREAQPTMGSSINWSAPSFTRFEAEVAAANALGLQVMAIIDDH CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEEEECC PSWATGSNHICAAILDQYHDEFAAFVRAVVAKYSQAPHYVRYWELGNEPDVDPRLVGENS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCC PFGCWGVIEDEYYGGERYGRMLMTVTPQIRAADPGAKVVFGGLLLARPQNGPNNNDGKPF CCEEEEEEECCCCCCHHHCCEEEEECCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCH NFLEGALRAGAGPYFDILAFHSYPTYFEEIGVNNAHVDFDKHPITFGGAWASRGGATLGK HHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCEEECCCCCEEECCCHHCCCCCCHHH INFLRDVMQRYGINKPLFLNETGLLCDDRYTSYVPVSGSCNAAAPTLQQAQANHLIRSSM HHHHHHHHHHHCCCCCEEECCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH RAIAAGVETYIWYTLQGPGWRHAGLLDGSQQPRPAYIAMKTAIERLNEVRIPPQAFTGYG HHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHCCCC TGFEAYRFSGNGFVLDVVWSVDDTLRQITLPASSFIAAYTRDGAPIVPTISGGTATLNVG CCCEEEEECCCCEEEEEEECCCHHHHEEECCHHHHHEEEECCCCCEEEEECCCEEEEEEC FENIYLKRKP EEEEEEEECC >Mature Secondary Structure MYRHRLIFVLVMWLIAIALPAAAQTPTNISTIYLPLVSANTIRPLGFETNTGWLSASSVY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCC PQAANLNAHWVRLNTLSWREAQPTMGSSINWSAPSFTRFEAEVAAANALGLQVMAIIDDH CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEEEEECC PSWATGSNHICAAILDQYHDEFAAFVRAVVAKYSQAPHYVRYWELGNEPDVDPRLVGENS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCC PFGCWGVIEDEYYGGERYGRMLMTVTPQIRAADPGAKVVFGGLLLARPQNGPNNNDGKPF CCEEEEEEECCCCCCHHHCCEEEEECCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCH NFLEGALRAGAGPYFDILAFHSYPTYFEEIGVNNAHVDFDKHPITFGGAWASRGGATLGK HHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCEEECCCCCEEECCCHHCCCCCCHHH INFLRDVMQRYGINKPLFLNETGLLCDDRYTSYVPVSGSCNAAAPTLQQAQANHLIRSSM HHHHHHHHHHHCCCCCEEECCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH RAIAAGVETYIWYTLQGPGWRHAGLLDGSQQPRPAYIAMKTAIERLNEVRIPPQAFTGYG HHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCHHHCCCC TGFEAYRFSGNGFVLDVVWSVDDTLRQITLPASSFIAAYTRDGAPIVPTISGGTATLNVG CCCEEEEECCCCEEEEEEECCCHHHHEEECCHHHHHEEEECCCCCEEEEECCCEEEEEEC FENIYLKRKP EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA