| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527001
Identifier: 222527001
GI number: 222527001
Start: 4711405
End: 4712259
Strand: Direct
Name: 222527001
Synonym: Chy400_3779
Alternate gene names: NA
Gene position: 4711405-4712259 (Clockwise)
Preceding gene: 222527000
Following gene: 222527002
Centisome position: 89.42
GC content: 62.57
Gene sequence:
>855_bases ATGCTTGACGATCACACCCAATTGGAATTTCCGGCCAGTGGCATGACGGAACTGCCGCTCATCTGGCAACCGCAGGTGAT CCGCTGCAAGGCTGCCGGCCCTGGTGGTCGCCCGCTGCTCGTCTTACTTGACACCGGTACCGACCCCTCGGCGATTGATC TGACGCTGGCGCGGCGGCTCGATCTGCGCCTCGGCGACTTTGCGCTCGGTTCTGATGCAACCTGCGACACTGTGCCGTTC ACCGAAACCGTGCTGCCCTGGTTGCGCCTCGGTGAGGTGATGCTGCGCAATCTCTATCTGATGGCCGTTGATTTGCGGCA GATGCCGTTTCCGGTTGATCTGGTGCTGGGATACAACGTTTTGCACCGTCTCAATCTAACGATTGATTATGCTGGTCAAA CGGTACGATTGTGCCACCCCGACCTGGCCCCGCCGCCGCCGGGCGCGGAGGGCGCAAGCGTGCCACTCCGCTTCTTTGAG CACTTTCCCGCGTTACCAGCCCAGATCATCGCGCCGAGCGGAGCCACGCACGACGTCATCCTGACAATTGACACCGGTTC CAACGGTGCGCTGACCGTGAGCCGTGATCTTGCCGCCAGTCTGCATCTCGATCTGCACACCGTCCAGGCGGCAACCGGCC ACGGGTTCGCTGCTGCAACACCGGTGAGCCGTGGATTCACCGTCGATCTCCAGCTTGGGCCATTCCGCCTGCCGGCAGTC GAAGTTGATGTGCCGGCGACCAGCCACGGCGATCTGGGGCGACAGGGACGGGCCAATGTCGGCAACCGGCTCCTCTCCCG CTTCCGACGGCTTACGCTCGACTACCGGCGGGAAGTGTGTATCCTGGATCGTTGA
Upstream 100 bases:
>100_bases GACTATCCGGCGCCGATTGTCGATCACGCCACGCAGCGCACCAAAGCGCTCGAACTCTATCGGGCGGCAACGCGCCATAA CGACTCATCAGCAGAACAGT
Downstream 100 bases:
>100_bases GGCGCGAGACCATTGCCCGGAGAATGTATGCGGTTGTGGATCGCCATTGTGCTTACCAGCCTGCTTCTCCTCACGCTGAC CGGCTCACGGTTAGAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLDDHTQLEFPASGMTELPLIWQPQVIRCKAAGPGGRPLLVLLDTGTDPSAIDLTLARRLDLRLGDFALGSDATCDTVPF TETVLPWLRLGEVMLRNLYLMAVDLRQMPFPVDLVLGYNVLHRLNLTIDYAGQTVRLCHPDLAPPPPGAEGASVPLRFFE HFPALPAQIIAPSGATHDVILTIDTGSNGALTVSRDLAASLHLDLHTVQAATGHGFAAATPVSRGFTVDLQLGPFRLPAV EVDVPATSHGDLGRQGRANVGNRLLSRFRRLTLDYRREVCILDR
Sequences:
>Translated_284_residues MLDDHTQLEFPASGMTELPLIWQPQVIRCKAAGPGGRPLLVLLDTGTDPSAIDLTLARRLDLRLGDFALGSDATCDTVPF TETVLPWLRLGEVMLRNLYLMAVDLRQMPFPVDLVLGYNVLHRLNLTIDYAGQTVRLCHPDLAPPPPGAEGASVPLRFFE HFPALPAQIIAPSGATHDVILTIDTGSNGALTVSRDLAASLHLDLHTVQAATGHGFAAATPVSRGFTVDLQLGPFRLPAV EVDVPATSHGDLGRQGRANVGNRLLSRFRRLTLDYRREVCILDR >Mature_284_residues MLDDHTQLEFPASGMTELPLIWQPQVIRCKAAGPGGRPLLVLLDTGTDPSAIDLTLARRLDLRLGDFALGSDATCDTVPF TETVLPWLRLGEVMLRNLYLMAVDLRQMPFPVDLVLGYNVLHRLNLTIDYAGQTVRLCHPDLAPPPPGAEGASVPLRFFE HFPALPAQIIAPSGATHDVILTIDTGSNGALTVSRDLAASLHLDLHTVQAATGHGFAAATPVSRGFTVDLQLGPFRLPAV EVDVPATSHGDLGRQGRANVGNRLLSRFRRLTLDYRREVCILDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30827; Mature: 30827
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDHTQLEFPASGMTELPLIWQPQVIRCKAAGPGGRPLLVLLDTGTDPSAIDLTLARRL CCCCCCEEEECCCCCCCCCEEECCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEE DLRLGDFALGSDATCDTVPFTETVLPWLRLGEVMLRNLYLMAVDLRQMPFPVDLVLGYNV CCEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCEEEHHHHHE LHRLNLTIDYAGQTVRLCHPDLAPPPPGAEGASVPLRFFEHFPALPAQIIAPSGATHDVI EEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCEEE LTIDTGSNGALTVSRDLAASLHLDLHTVQAATGHGFAAATPVSRGFTVDLQLGPFRLPAV EEEECCCCCEEEEECCCEEEEEEEEEEEEECCCCCEEEECCCCCCEEEEEEECCEECCEE EVDVPATSHGDLGRQGRANVGNRLLSRFRRLTLDYRREVCILDR EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MLDDHTQLEFPASGMTELPLIWQPQVIRCKAAGPGGRPLLVLLDTGTDPSAIDLTLARRL CCCCCCEEEECCCCCCCCCEEECCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEE DLRLGDFALGSDATCDTVPFTETVLPWLRLGEVMLRNLYLMAVDLRQMPFPVDLVLGYNV CCEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEHHHCCCCEEEHHHHHE LHRLNLTIDYAGQTVRLCHPDLAPPPPGAEGASVPLRFFEHFPALPAQIIAPSGATHDVI EEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCEEE LTIDTGSNGALTVSRDLAASLHLDLHTVQAATGHGFAAATPVSRGFTVDLQLGPFRLPAV EEEECCCCCEEEEECCCEEEEEEEEEEEEECCCCCEEEECCCCCCEEEEEEECCEECCEE EVDVPATSHGDLGRQGRANVGNRLLSRFRRLTLDYRREVCILDR EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA