| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526923
Identifier: 222526923
GI number: 222526923
Start: 4614169
End: 4616550
Strand: Direct
Name: 222526923
Synonym: Chy400_3701
Alternate gene names: NA
Gene position: 4614169-4616550 (Clockwise)
Preceding gene: 222526922
Following gene: 222526924
Centisome position: 87.57
GC content: 59.03
Gene sequence:
>2382_bases ATGGCAACTTCTATTTGGAAACGAGTTCATCTGACAACTGCTCATAGTCAGACGCGCCGCCTGTCGGGTGTTGTGCTACC GGCGTTCTGGCTGGCGGTATTCACGGTCGTGGTGCTCATTGTGAGCTACACAGTGCGCCCACTGGTTGTCGTTGATGTGG GCGATAACCGCGATGGTGCCTTTTTAGAAAACTTCAATGCTCGCGAGATCGACGCAGCCGGCCCATTCGAGCGGTTTGAT TGGCCGGTGGGCGCGGCCTCTATTACTATCCCCGGCAATCGCCAGGGCGTCTGGCTGGCGCGCATTGTAGCCCGACCTGA TGCCGATCCGATCATCTTGCAGCGCGAGTCGGCGGCGGCAGTGAATGGCGTGCGCGTCGAGATGCCGCGCCGTAACGGGA ACGAGATGTTCGTCAAAATTCCCTCCCATATTGCAGCGGCACCGACTCTCACCTTTGAGCTGGTTTCGGCACTGGTCGGC GGTGAAACGCCGCCTGCCGGAGTACCGCTGGCCGTCGAGCTGGCACCGGCCCGTACCTATCGCTGGAGTACCGATCAAAG CGAGATTCACTTTCCGCGCCTTGGACAGGGTACCTGGATTGTACGGCTTGATGCGGTCGTCGCTCACCCTGACGGTTCAC CGGTCAATGGCCGTATCCAGATCAACGGTGTCGAGCTGGCACGCTTACCGGAACAACCACAGTTACGCCGTCTGCAATTG CTGGTGCCAGCAGCGTTGATGGGGAGTGGCGATCTGACTGTATCGTTGCAGGCCGATCCGTTTCGCGATCCCCGTCCACT TGGCGTGTTGATCGCCGATGTTGCCGTGGCTCCGGCCGCCAGTTCCTTGCTGGCAACAGTGATGCCACCACCGATGGCCC TCGGTCTGGGACTGTTTGTTGTTATCGGGATGTTTGCCTGTCTGGCCCTGCTAACCGTAGACTTGCAACGACGCTGGTGG CTCGATGCTACCGGCTGGGCTGCAGTGGCAATGGCGCTGGTCGTCGTTGGTGCAGGCTGGGCACTGGTGGTCTATCGCTT CCCCGGCGGTCAGATGATTGACCGTCTCGCTGCGCTAACGGTGCTAAGTCTGGCTCTAACGCTGCTGATGCGACCGCTCA CGCGCTGGTTGTTGCGACAAACCGGCGTCAGCGTCACTCCTGCATTCACGGCAACGCTGCTAATCGTCTTTCTGGTGGGA TTCTGGCTCAAAGCGATTGGCATGCTCTATCCTTACTTTGTCGGGATCGATGTCTTCTGGCACATGGACAAGGCGCGACG GATTTTGTTTGACGGCGCTTTACCACTCTACTACAGTACCAACAGCCCGCTGAATGAGACGACCATGCCTGTGGCTGAGT GGGGCCGGAACCCGCCGGTGATTCCGTATTCACCCTGGTTCCACATCCTGGCGACAGCCTATGCCATCTTTCCATGGCCG ATGGAAATGACGGCCAACTTCGTGAGCCTTTTGATGGATATGTCGCGGGTCGTGCTGATCGCGGCGATTGCGTTGAAGGC AGGGTTGTCACAGCGAGCAGCGCTGCTGGCAAGTGTGACGTATGCGGTGCTGCCGGTGACCTATCTGCTCCATATCTGGG GGAATGTGCCAACTGCCGCCGGCTTGTGGCTCAGCCTGCTGGTGCAGACGACGATCCTGCTGGCGTGGGATCGGCTGGGT GAGTGGAAGGTACAGGTCTGGTTTGTACCGCTACTACTGCTAACCTTCCTGGTCTACACGGTTACCGGGGTCTTCACCGG GATATTCCTGGTGGTGCTGACTCTGCTCATCTGGCTCAATGCCCGGCGTGGCCCGGCGTGGCAGGCGTTGCTGCCGGGAT TACGTCCGCTTTGGGTGGCGACGGCAGCGGCAATCGGGCTGGCGATTGCGATCTACTATGGGCAATATTTCCAGCCTATC GTTGAGCGAACACTGCCGTACATGGCGACAGTCTTTACCCGTGGCCCAGAGACGGTCGGTGTGTCACGGCCACCATTTCT GGAATATCTCTGGTCATTCGTGCCCCACCTTGGTTACCATATCTGGCCCAACCACTACCTGTACTACGGTCTGGCGATTC CGCTGATCTTCTTCGTGCCGGGGTATTGGGCGATGCGCTCACAGCCGCTGCTCTGGCTGGTGGCGTCGGCCTGGGGGACC GTCGCGCTGCTCTTCTTAATTGCCGGCTATCGCATTTCGATGGTCGATAAGCAGCTCTTTTATCTCATTCCGCTGATCTG TCTGGCCTGGGCAATCATGGCTGATCGGTTGTGGGTGCGCTGGCCAGGTCGCTTATTCGTACTGGCGATGCTTGTCCTCT CGCTGGGGAGTGCGCTCTGGTTGTGGGTGATGCGGATCAGTATTTCGCCGGTGCAGAATTAG
Upstream 100 bases:
>100_bases CATGCCCGGCCTTGCAAGGCGACTCGGTGAGCGTGGTACAATGCGGCGATGATGTAACAATGTCAGGCGCGGTACCCGCG CTCATCAGGTATCGTTAACG
Downstream 100 bases:
>100_bases GTTCGTCGGTATGAGTGAATTGATTGAACGGATTGATGAACAACTGGCTGCGGCGATTGATCCGTGGCTGCAACACATGA CCTGGCGACGCGATTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 793; Mature: 792
Protein sequence:
>793_residues MATSIWKRVHLTTAHSQTRRLSGVVLPAFWLAVFTVVVLIVSYTVRPLVVVDVGDNRDGAFLENFNAREIDAAGPFERFD WPVGAASITIPGNRQGVWLARIVARPDADPIILQRESAAAVNGVRVEMPRRNGNEMFVKIPSHIAAAPTLTFELVSALVG GETPPAGVPLAVELAPARTYRWSTDQSEIHFPRLGQGTWIVRLDAVVAHPDGSPVNGRIQINGVELARLPEQPQLRRLQL LVPAALMGSGDLTVSLQADPFRDPRPLGVLIADVAVAPAASSLLATVMPPPMALGLGLFVVIGMFACLALLTVDLQRRWW LDATGWAAVAMALVVVGAGWALVVYRFPGGQMIDRLAALTVLSLALTLLMRPLTRWLLRQTGVSVTPAFTATLLIVFLVG FWLKAIGMLYPYFVGIDVFWHMDKARRILFDGALPLYYSTNSPLNETTMPVAEWGRNPPVIPYSPWFHILATAYAIFPWP MEMTANFVSLLMDMSRVVLIAAIALKAGLSQRAALLASVTYAVLPVTYLLHIWGNVPTAAGLWLSLLVQTTILLAWDRLG EWKVQVWFVPLLLLTFLVYTVTGVFTGIFLVVLTLLIWLNARRGPAWQALLPGLRPLWVATAAAIGLAIAIYYGQYFQPI VERTLPYMATVFTRGPETVGVSRPPFLEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFVPGYWAMRSQPLLWLVASAWGT VALLFLIAGYRISMVDKQLFYLIPLICLAWAIMADRLWVRWPGRLFVLAMLVLSLGSALWLWVMRISISPVQN
Sequences:
>Translated_793_residues MATSIWKRVHLTTAHSQTRRLSGVVLPAFWLAVFTVVVLIVSYTVRPLVVVDVGDNRDGAFLENFNAREIDAAGPFERFD WPVGAASITIPGNRQGVWLARIVARPDADPIILQRESAAAVNGVRVEMPRRNGNEMFVKIPSHIAAAPTLTFELVSALVG GETPPAGVPLAVELAPARTYRWSTDQSEIHFPRLGQGTWIVRLDAVVAHPDGSPVNGRIQINGVELARLPEQPQLRRLQL LVPAALMGSGDLTVSLQADPFRDPRPLGVLIADVAVAPAASSLLATVMPPPMALGLGLFVVIGMFACLALLTVDLQRRWW LDATGWAAVAMALVVVGAGWALVVYRFPGGQMIDRLAALTVLSLALTLLMRPLTRWLLRQTGVSVTPAFTATLLIVFLVG FWLKAIGMLYPYFVGIDVFWHMDKARRILFDGALPLYYSTNSPLNETTMPVAEWGRNPPVIPYSPWFHILATAYAIFPWP MEMTANFVSLLMDMSRVVLIAAIALKAGLSQRAALLASVTYAVLPVTYLLHIWGNVPTAAGLWLSLLVQTTILLAWDRLG EWKVQVWFVPLLLLTFLVYTVTGVFTGIFLVVLTLLIWLNARRGPAWQALLPGLRPLWVATAAAIGLAIAIYYGQYFQPI VERTLPYMATVFTRGPETVGVSRPPFLEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFVPGYWAMRSQPLLWLVASAWGT VALLFLIAGYRISMVDKQLFYLIPLICLAWAIMADRLWVRWPGRLFVLAMLVLSLGSALWLWVMRISISPVQN >Mature_792_residues ATSIWKRVHLTTAHSQTRRLSGVVLPAFWLAVFTVVVLIVSYTVRPLVVVDVGDNRDGAFLENFNAREIDAAGPFERFDW PVGAASITIPGNRQGVWLARIVARPDADPIILQRESAAAVNGVRVEMPRRNGNEMFVKIPSHIAAAPTLTFELVSALVGG ETPPAGVPLAVELAPARTYRWSTDQSEIHFPRLGQGTWIVRLDAVVAHPDGSPVNGRIQINGVELARLPEQPQLRRLQLL VPAALMGSGDLTVSLQADPFRDPRPLGVLIADVAVAPAASSLLATVMPPPMALGLGLFVVIGMFACLALLTVDLQRRWWL DATGWAAVAMALVVVGAGWALVVYRFPGGQMIDRLAALTVLSLALTLLMRPLTRWLLRQTGVSVTPAFTATLLIVFLVGF WLKAIGMLYPYFVGIDVFWHMDKARRILFDGALPLYYSTNSPLNETTMPVAEWGRNPPVIPYSPWFHILATAYAIFPWPM EMTANFVSLLMDMSRVVLIAAIALKAGLSQRAALLASVTYAVLPVTYLLHIWGNVPTAAGLWLSLLVQTTILLAWDRLGE WKVQVWFVPLLLLTFLVYTVTGVFTGIFLVVLTLLIWLNARRGPAWQALLPGLRPLWVATAAAIGLAIAIYYGQYFQPIV ERTLPYMATVFTRGPETVGVSRPPFLEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFVPGYWAMRSQPLLWLVASAWGTV ALLFLIAGYRISMVDKQLFYLIPLICLAWAIMADRLWVRWPGRLFVLAMLVLSLGSALWLWVMRISISPVQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87839; Mature: 87708
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSIWKRVHLTTAHSQTRRLSGVVLPAFWLAVFTVVVLIVSYTVRPLVVVDVGDNRDGA CCCHHHHHEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC FLENFNAREIDAAGPFERFDWPVGAASITIPGNRQGVWLARIVARPDADPIILQRESAAA HHCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCHH VNGVRVEMPRRNGNEMFVKIPSHIAAAPTLTFELVSALVGGETPPAGVPLAVELAPARTY HCCEEEEECCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEE RWSTDQSEIHFPRLGQGTWIVRLDAVVAHPDGSPVNGRIQINGVELARLPEQPQLRRLQL ECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEECEEEECCCCCCHHHHHHH LVPAALMGSGDLTVSLQADPFRDPRPLGVLIADVAVAPAASSLLATVMPPPMALGLGLFV HHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VIGMFACLALLTVDLQRRWWLDATGWAAVAMALVVVGAGWALVVYRFPGGQMIDRLAALT HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH VLSLALTLLMRPLTRWLLRQTGVSVTPAFTATLLIVFLVGFWLKAIGMLYPYFVGIDVFW HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HMDKARRILFDGALPLYYSTNSPLNETTMPVAEWGRNPPVIPYSPWFHILATAYAIFPWP EHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC MEMTANFVSLLMDMSRVVLIAAIALKAGLSQRAALLASVTYAVLPVTYLLHIWGNVPTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GLWLSLLVQTTILLAWDRLGEWKVQVWFVPLLLLTFLVYTVTGVFTGIFLVVLTLLIWLN HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ARRGPAWQALLPGLRPLWVATAAAIGLAIAIYYGQYFQPIVERTLPYMATVFTRGPETVG CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VSRPPFLEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFVPGYWAMRSQPLLWLVASAWGT CCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEHHHHHHH VALLFLIAGYRISMVDKQLFYLIPLICLAWAIMADRLWVRWPGRLFVLAMLVLSLGSALW HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHH LWVMRISISPVQN HHHHHHHCCCCCC >Mature Secondary Structure ATSIWKRVHLTTAHSQTRRLSGVVLPAFWLAVFTVVVLIVSYTVRPLVVVDVGDNRDGA CCHHHHHEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC FLENFNAREIDAAGPFERFDWPVGAASITIPGNRQGVWLARIVARPDADPIILQRESAAA HHCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCHH VNGVRVEMPRRNGNEMFVKIPSHIAAAPTLTFELVSALVGGETPPAGVPLAVELAPARTY HCCEEEEECCCCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEE RWSTDQSEIHFPRLGQGTWIVRLDAVVAHPDGSPVNGRIQINGVELARLPEQPQLRRLQL ECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEECEEEECCCCCCHHHHHHH LVPAALMGSGDLTVSLQADPFRDPRPLGVLIADVAVAPAASSLLATVMPPPMALGLGLFV HHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VIGMFACLALLTVDLQRRWWLDATGWAAVAMALVVVGAGWALVVYRFPGGQMIDRLAALT HHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHH VLSLALTLLMRPLTRWLLRQTGVSVTPAFTATLLIVFLVGFWLKAIGMLYPYFVGIDVFW HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE HMDKARRILFDGALPLYYSTNSPLNETTMPVAEWGRNPPVIPYSPWFHILATAYAIFPWP EHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC MEMTANFVSLLMDMSRVVLIAAIALKAGLSQRAALLASVTYAVLPVTYLLHIWGNVPTAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GLWLSLLVQTTILLAWDRLGEWKVQVWFVPLLLLTFLVYTVTGVFTGIFLVVLTLLIWLN HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ARRGPAWQALLPGLRPLWVATAAAIGLAIAIYYGQYFQPIVERTLPYMATVFTRGPETVG CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VSRPPFLEYLWSFVPHLGYHIWPNHYLYYGLAIPLIFFVPGYWAMRSQPLLWLVASAWGT CCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHCCCHHHHCCCCCEEEHHHHHHH VALLFLIAGYRISMVDKQLFYLIPLICLAWAIMADRLWVRWPGRLFVLAMLVLSLGSALW HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHH LWVMRISISPVQN HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA