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The map label for this gene is nrdR

Identifier: 222526907

GI number: 222526907

Start: 4596952

End: 4597452

Strand: Reverse

Name: nrdR

Synonym: Chy400_3685

Alternate gene names: 222526907

Gene position: 4597452-4596952 (Counterclockwise)

Preceding gene: 222526908

Following gene: 222526906

Centisome position: 87.26

GC content: 57.29

Gene sequence:

>501_bases
ATGCGGTGCCCGTTTTGCCATTTTGTCGAGACCGATGTTATCGATACGCGCAAACTGTACGAAGGCGAGGTGATCCGTCG
CCGTCGGCGCTGCCGTGCCTGCGGTCGCCGCTTCACCACCTACGAACGTATCGAGTCGGTCAGCCTGATGGTCGTCAAAA
AAGATGGCACACGCGAACCGTATGACCGCGAGAAGATTGCGCGCGGCGTGCGCACCGCCTGCTACCGTCGCCCGGTCTCG
GCGGCGGCCATCGAACAACTGGTCAATGATGTCGAAACCGCTATCATGAACACCGACGAACACGAAATCAGTTCGCAGGC
TATTGGTGACGCGGTGATGCAGCGCTTGCGCGATCTCGATGAAGTAGCCTATATTCGCTTCGCTTCAGTCTACCGTGCGT
TTACCGACATTGGCAAGTTGCGCGAAGCTGTTGATGAACTCCTTGATCGGGAAGGTGTCCGCAATGGTCACCTCTCGCCT
AAACCAGCAGAGGACTCATGA

Upstream 100 bases:

>100_bases
GGTCTGTTAAAACGCAGCTTTGGCCGCGAGGTGCAGATCAGAGCAACATGAGCCTGTGCTATAATGCCACATAGCAAGAA
GTGAGGGATAGGCTACACGC

Downstream 100 bases:

>100_bases
GTATGAGCGTTGAAACGACACCTCAGCCGGTGTCTGAACAGGCAACCAAACCATCATTATTCCAGCGCATTGTTCATTCG
ATACGATCCATCGAATGGAC

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREPYDREKIARGVRTACYRRPVS
AAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLDEVAYIRFASVYRAFTDIGKLREAVDELLDREGVRNGHLSP
KPAEDS

Sequences:

>Translated_166_residues
MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREPYDREKIARGVRTACYRRPVS
AAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLDEVAYIRFASVYRAFTDIGKLREAVDELLDREGVRNGHLSP
KPAEDS
>Mature_166_residues
MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREPYDREKIARGVRTACYRRPVS
AAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLDEVAYIRFASVYRAFTDIGKLREAVDELLDREGVRNGHLSP
KPAEDS

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=149, Percent_Identity=46.9798657718121, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_CHLAA (A9WKI1)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001636998.1
- GeneID:   5825226
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_3424
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- ProtClustDB:   PRK00464
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 19172; Mature: 19172

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
YDREKIARGVRTACYRRPVSAAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EVAYIRFASVYRAFTDIGKLREAVDELLDREGVRNGHLSPKPAEDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
YDREKIARGVRTACYRRPVSAAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EVAYIRFASVYRAFTDIGKLREAVDELLDREGVRNGHLSPKPAEDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA