| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526892
Identifier: 222526892
GI number: 222526892
Start: 4577257
End: 4579155
Strand: Reverse
Name: 222526892
Synonym: Chy400_3670
Alternate gene names: NA
Gene position: 4579155-4577257 (Counterclockwise)
Preceding gene: 222526893
Following gene: 222526886
Centisome position: 86.91
GC content: 59.14
Gene sequence:
>1899_bases ATGTCGTTTCTGGCACCATTAGCGTTAATCAGTGCAGCAATTGTTGGCCCAATCATCGTGGCCATGTATCTGCTCAAGTT ACGCCGGGAAGAGCGCGTCATCTCGTCTACCTTCCTCTGGCAGCGGATGGTGCGTGACATTGAAGCCAATGCACCGTGGC AGAAACTGCGTCGGAATCTGCTCTTACTCTTGCAATTGCTGCTGATGATATTGCTGGTGCTGGCCCTGGCCCGCCCCTTC CTGCCCGTAACCGGTATCAGTGGCTCAAACCTGATCATCATCTTCGACCGCTCGACCAGCATGCTGGCGACCGACGAGCT ACCGACGCGCCTGGAAGCAGCCCGTCGCCAGGCTATCGCATTGATCGACCAGCTTCCCGATAATGGCCGGGCCACGATTA TTACGGTTGGCGGTCAGATGGAAGCGCCTATCGCCTCGTCAAACGACCGTCGCGAGCTACGTCGGGTTATTGAACAGATT CAACCCAGCTACAGCAATCAATCCGACTTGACCCAGGCCCTCACCCTGGCCTCAGCCCTCGCGGCCCGTGAACCCGATAG CGAAGTAGCGATCATTTCCGACGGGAATGTCACTCTTCCTGATGGCTTGCGCGTCCCGGCCCGAGTGCGCTACTTCCCGA TTGGCCGGGCAACCGATAATGTGGCAATTAACGCGATTGCACTCCAGCCCGGCCCCTTCGAGCAAACCCTGTTCGTCCAG GCCACAAACTACGGTGACAGTCCGGTGACCCGGCGGCTATCGATCTATCTCGATGGTCGGCTCGATTTTGCGATTGACCT GACCATCGATCCGGGTCGTGAGCAGAGCCTGACTCAACCTATCCCGTCTACCGTCACGATTGTTGAGGCACGGCTCGACG AAAACGGCGATGCCTTGCCGGTTGATGATCGCGCCTTTGCCGTTAGCCCACAACGTGAAACGGTGCGCGTGCGGCTGGTC AGTGACGGCAATCGCTTCCTTGAAACCGGTCTCTCTCTGCTGCCCGGCATCGAGGTCGTGAAAACACCAACGACGACCAC CACCTTCCCGGAAAGCGCAGCAGAAATCCCGCTCACCATCTTTGACGGCGTCACACCCGCCGAACTGCCACCGGGGAACC TGCTCTTCATCGGCCCTCTCCAGAGCACAGAACTCTTTTCGATCACCGGCGAATTTGACTTTCCGCTCATTCGTCCGGCG TCGCTTGAAGACCCTCTCTTGCGCAACGTGCGCTTGAACGACGTCAACATCTTGCGCGCACCGCGTATCGTTCCCGGCAC ATGGGCGCGGATCATCGTTGATAGCGATGGCGGCCCGCTCCTGCTGGCCGGAGAGCGTGAAGGGCGGCGGATTGTGGTGT TGGCCTTCGACCTGCACCTGTCAGACCTGCCGCTCAACATTGCCTTCCCGTTACTCCTCTCGAACATGATCGAGTATCTC TTGCCGGTGAGTGGCGTCCAACTGACCACCGGGCAGCCGATTGTGGCGCCGGTTGATCCGAGTATCGAAGAGGTTCGGAT AATCCGCCCGGATGGGCGCGTCGTCAGCTCACGCGACGGCCAGGTGCAGGTGCAGACGAATCAAACCTTTTACACCAATA CCGACGTTCCCGGTGTGTATACGCTGGAGGAACGGCGCGGAAATGAAGTCATTGCCAGTCGCCGCTTCGCGGTCAATCTC TTTGCGCCCAATGAATCACGGATCGAACCGCGTCGTGACCTTGCCATCCCCCAGATTAGCGGTGCGCAGAGCACGGTCGT GCGTGAGCGAGATGGCCGGCAGGAAATCTGGCGCTGGCTGGCGTTGGTCGCGTTGATCGTGCTGTTGATCGAATGGCTCT ACTATCAACGCAATACGCTGACCATGCTCCGCGAGCGCTGGCGGCGACGGACGGCTTAG
Upstream 100 bases:
>100_bases TGATTGCCCGTGGCGAGGCTCCGTTCACTCCTGATCCGCCGATCACGGATCACGGTAGCACAGCGCACAGGCCGCATACC ACTACGAACAGGTAAGGTCT
Downstream 100 bases:
>100_bases GTGCGATTGGGGTCGGGCGGGCTAAAGCCCTGCCTCATGACGGGCAAGCCCCTACGGGGCTAGAGGTCACCCCCGGCTCG TGCGGGTTGAACGCCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MSFLAPLALISAAIVGPIIVAMYLLKLRREERVISSTFLWQRMVRDIEANAPWQKLRRNLLLLLQLLLMILLVLALARPF LPVTGISGSNLIIIFDRSTSMLATDELPTRLEAARRQAIALIDQLPDNGRATIITVGGQMEAPIASSNDRRELRRVIEQI QPSYSNQSDLTQALTLASALAAREPDSEVAIISDGNVTLPDGLRVPARVRYFPIGRATDNVAINAIALQPGPFEQTLFVQ ATNYGDSPVTRRLSIYLDGRLDFAIDLTIDPGREQSLTQPIPSTVTIVEARLDENGDALPVDDRAFAVSPQRETVRVRLV SDGNRFLETGLSLLPGIEVVKTPTTTTTFPESAAEIPLTIFDGVTPAELPPGNLLFIGPLQSTELFSITGEFDFPLIRPA SLEDPLLRNVRLNDVNILRAPRIVPGTWARIIVDSDGGPLLLAGEREGRRIVVLAFDLHLSDLPLNIAFPLLLSNMIEYL LPVSGVQLTTGQPIVAPVDPSIEEVRIIRPDGRVVSSRDGQVQVQTNQTFYTNTDVPGVYTLEERRGNEVIASRRFAVNL FAPNESRIEPRRDLAIPQISGAQSTVVRERDGRQEIWRWLALVALIVLLIEWLYYQRNTLTMLRERWRRRTA
Sequences:
>Translated_632_residues MSFLAPLALISAAIVGPIIVAMYLLKLRREERVISSTFLWQRMVRDIEANAPWQKLRRNLLLLLQLLLMILLVLALARPF LPVTGISGSNLIIIFDRSTSMLATDELPTRLEAARRQAIALIDQLPDNGRATIITVGGQMEAPIASSNDRRELRRVIEQI QPSYSNQSDLTQALTLASALAAREPDSEVAIISDGNVTLPDGLRVPARVRYFPIGRATDNVAINAIALQPGPFEQTLFVQ ATNYGDSPVTRRLSIYLDGRLDFAIDLTIDPGREQSLTQPIPSTVTIVEARLDENGDALPVDDRAFAVSPQRETVRVRLV SDGNRFLETGLSLLPGIEVVKTPTTTTTFPESAAEIPLTIFDGVTPAELPPGNLLFIGPLQSTELFSITGEFDFPLIRPA SLEDPLLRNVRLNDVNILRAPRIVPGTWARIIVDSDGGPLLLAGEREGRRIVVLAFDLHLSDLPLNIAFPLLLSNMIEYL LPVSGVQLTTGQPIVAPVDPSIEEVRIIRPDGRVVSSRDGQVQVQTNQTFYTNTDVPGVYTLEERRGNEVIASRRFAVNL FAPNESRIEPRRDLAIPQISGAQSTVVRERDGRQEIWRWLALVALIVLLIEWLYYQRNTLTMLRERWRRRTA >Mature_631_residues SFLAPLALISAAIVGPIIVAMYLLKLRREERVISSTFLWQRMVRDIEANAPWQKLRRNLLLLLQLLLMILLVLALARPFL PVTGISGSNLIIIFDRSTSMLATDELPTRLEAARRQAIALIDQLPDNGRATIITVGGQMEAPIASSNDRRELRRVIEQIQ PSYSNQSDLTQALTLASALAAREPDSEVAIISDGNVTLPDGLRVPARVRYFPIGRATDNVAINAIALQPGPFEQTLFVQA TNYGDSPVTRRLSIYLDGRLDFAIDLTIDPGREQSLTQPIPSTVTIVEARLDENGDALPVDDRAFAVSPQRETVRVRLVS DGNRFLETGLSLLPGIEVVKTPTTTTTFPESAAEIPLTIFDGVTPAELPPGNLLFIGPLQSTELFSITGEFDFPLIRPAS LEDPLLRNVRLNDVNILRAPRIVPGTWARIIVDSDGGPLLLAGEREGRRIVVLAFDLHLSDLPLNIAFPLLLSNMIEYLL PVSGVQLTTGQPIVAPVDPSIEEVRIIRPDGRVVSSRDGQVQVQTNQTFYTNTDVPGVYTLEERRGNEVIASRRFAVNLF APNESRIEPRRDLAIPQISGAQSTVVRERDGRQEIWRWLALVALIVLLIEWLYYQRNTLTMLRERWRRRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70223; Mature: 70092
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLAPLALISAAIVGPIIVAMYLLKLRREERVISSTFLWQRMVRDIEANAPWQKLRRNL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLLLQLLLMILLVLALARPFLPVTGISGSNLIIIFDRSTSMLATDELPTRLEAARRQAIA HHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHH LIDQLPDNGRATIITVGGQMEAPIASSNDRRELRRVIEQIQPSYSNQSDLTQALTLASAL HHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AAREPDSEVAIISDGNVTLPDGLRVPARVRYFPIGRATDNVAINAIALQPGPFEQTLFVQ HHCCCCCCEEEEECCCEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEE ATNYGDSPVTRRLSIYLDGRLDFAIDLTIDPGREQSLTQPIPSTVTIVEARLDENGDALP EECCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCC VDDRAFAVSPQRETVRVRLVSDGNRFLETGLSLLPGIEVVKTPTTTTTFPESAAEIPLTI CCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEE FDGVTPAELPPGNLLFIGPLQSTELFSITGEFDFPLIRPASLEDPLLRNVRLNDVNILRA ECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEECCCCCCCHHHHCEEECCEEEEEC PRIVPGTWARIIVDSDGGPLLLAGEREGRRIVVLAFDLHLSDLPLNIAFPLLLSNMIEYL CCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHH LPVSGVQLTTGQPIVAPVDPSIEEVRIIRPDGRVVSSRDGQVQVQTNQTFYTNTDVPGVY CCCCCEEEECCCEEEECCCCCCCCEEEECCCCCEEECCCCEEEEEECCEEEECCCCCCEE TLEERRGNEVIASRRFAVNLFAPNESRIEPRRDLAIPQISGAQSTVVRERDGRQEIWRWL EECCCCCCCEEEECEEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHCCCCHHHHHHHH ALVALIVLLIEWLYYQRNTLTMLRERWRRRTA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure SFLAPLALISAAIVGPIIVAMYLLKLRREERVISSTFLWQRMVRDIEANAPWQKLRRNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLLLQLLLMILLVLALARPFLPVTGISGSNLIIIFDRSTSMLATDELPTRLEAARRQAIA HHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHH LIDQLPDNGRATIITVGGQMEAPIASSNDRRELRRVIEQIQPSYSNQSDLTQALTLASAL HHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AAREPDSEVAIISDGNVTLPDGLRVPARVRYFPIGRATDNVAINAIALQPGPFEQTLFVQ HHCCCCCCEEEEECCCEECCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEE ATNYGDSPVTRRLSIYLDGRLDFAIDLTIDPGREQSLTQPIPSTVTIVEARLDENGDALP EECCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCC VDDRAFAVSPQRETVRVRLVSDGNRFLETGLSLLPGIEVVKTPTTTTTFPESAAEIPLTI CCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEE FDGVTPAELPPGNLLFIGPLQSTELFSITGEFDFPLIRPASLEDPLLRNVRLNDVNILRA ECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEECCCCCCCHHHHCEEECCEEEEEC PRIVPGTWARIIVDSDGGPLLLAGEREGRRIVVLAFDLHLSDLPLNIAFPLLLSNMIEYL CCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHH LPVSGVQLTTGQPIVAPVDPSIEEVRIIRPDGRVVSSRDGQVQVQTNQTFYTNTDVPGVY CCCCCEEEECCCEEEECCCCCCCCEEEECCCCCEEECCCCEEEEEECCEEEECCCCCCEE TLEERRGNEVIASRRFAVNLFAPNESRIEPRRDLAIPQISGAQSTVVRERDGRQEIWRWL EECCCCCCCEEEECEEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHCCCCHHHHHHHH ALVALIVLLIEWLYYQRNTLTMLRERWRRRTA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA