| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526887
Identifier: 222526887
GI number: 222526887
Start: 4572508
End: 4573482
Strand: Direct
Name: 222526887
Synonym: Chy400_3665
Alternate gene names: NA
Gene position: 4572508-4573482 (Clockwise)
Preceding gene: 222526882
Following gene: 222526888
Centisome position: 86.78
GC content: 58.97
Gene sequence:
>975_bases ATGAGGCTTCGATTAAGCTTGATCGGGTGCTGGCTGATAACCTGGTTGATCTGGTCGGCAGACGTATCTGCGCAGCCGGT TGAGGTGTCTCTCACCGAGTACGACCGTCTATTACGGGCTACCTACACTGCGGCCCAACGGGGTGATCTGCTTGAGGTGA GGGCACTGGCAGATGATCTGACAACGATCCGCCAGGTGCGTATGCCCGATGGTCAGATCGCGCCGGTCGATCAGTCCTGG CTGGCCGAGATGCTGGCTCAGCCGACACCTGACCTGCCGCTTATCTCTGCCCGGCTGGGAGCCTTGATTGATGCGCTGGA ACCGACCGGTAGTGCGGTCGCTGCCGATGCCTTGCAGCATTGGGAAGCGGTCTTTAACGAGCCACCGTTCAACCGCAGCC AATCCGAGAGCTGGCTGACTCGCTTCCTCAACTGGTTATTCGAGCGTCTTGCCGATCTCTTGCCTGATCTGCCTGATGTA CCAGAAGCCCCGGTTGCCGGCGATAGCTCACCGATCAGCGGGATTATCTGGGTGATGCTCGCAGTGGTAGCATTGCTGTT CGCTGGTTTACTCTTGTTTTGGGTGCGCGGTGTCCGTCGGGTATTTCAGCCGGTTACCACAGCGGCCAGCCCGACAACCG ATCCGGTTACCTTTGCCGCAGCCCAGCGCCTGGCCGAGGCTGCCCGCCAGGCGGGAGACCTGCGCAATGCGGTGCGTTAT CTCTATCTGGCGGTGCTGCTCTGGCTCGATGATCAGAAGATTCTGCCGTATCAGCCCTCGCTCACCAATCGCGAGCATCT CCAACGTCTGCAAGACTGGCCGGCGCTCCGCGATCAACTGCTGCCGCTGATGACCACGTTTGAAAAGACCTGGTACGGTT TGCAAGCCATTGATGAGGCTACCTTTGCCGGATACGAACAACAGGCCACATCACTGTTCAAACAGGTGAGGTCGCCCAAT GAAGCTGCGTCTTGA
Upstream 100 bases:
>100_bases GGCCATTGGTCTTCCTCCCACGAGACGGCGTTGCACAGGGTTTGTCACACACTTGTTTTTACTATACCGTAAAGTTTTCT GACGGTCAAGGGTAGAAATA
Downstream 100 bases:
>100_bases ATTAGTGTTGCTGCTTGCGCTCATTATCGGCCTCGGTGTGATTGCGGCGTATTATGCCGATCAGCGCGGTCAACAGGCAG CAGGGATACGCACCACATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRLRLSLIGCWLITWLIWSADVSAQPVEVSLTEYDRLLRATYTAAQRGDLLEVRALADDLTTIRQVRMPDGQIAPVDQSW LAEMLAQPTPDLPLISARLGALIDALEPTGSAVAADALQHWEAVFNEPPFNRSQSESWLTRFLNWLFERLADLLPDLPDV PEAPVAGDSSPISGIIWVMLAVVALLFAGLLLFWVRGVRRVFQPVTTAASPTTDPVTFAAAQRLAEAARQAGDLRNAVRY LYLAVLLWLDDQKILPYQPSLTNREHLQRLQDWPALRDQLLPLMTTFEKTWYGLQAIDEATFAGYEQQATSLFKQVRSPN EAAS
Sequences:
>Translated_324_residues MRLRLSLIGCWLITWLIWSADVSAQPVEVSLTEYDRLLRATYTAAQRGDLLEVRALADDLTTIRQVRMPDGQIAPVDQSW LAEMLAQPTPDLPLISARLGALIDALEPTGSAVAADALQHWEAVFNEPPFNRSQSESWLTRFLNWLFERLADLLPDLPDV PEAPVAGDSSPISGIIWVMLAVVALLFAGLLLFWVRGVRRVFQPVTTAASPTTDPVTFAAAQRLAEAARQAGDLRNAVRY LYLAVLLWLDDQKILPYQPSLTNREHLQRLQDWPALRDQLLPLMTTFEKTWYGLQAIDEATFAGYEQQATSLFKQVRSPN EAAS >Mature_324_residues MRLRLSLIGCWLITWLIWSADVSAQPVEVSLTEYDRLLRATYTAAQRGDLLEVRALADDLTTIRQVRMPDGQIAPVDQSW LAEMLAQPTPDLPLISARLGALIDALEPTGSAVAADALQHWEAVFNEPPFNRSQSESWLTRFLNWLFERLADLLPDLPDV PEAPVAGDSSPISGIIWVMLAVVALLFAGLLLFWVRGVRRVFQPVTTAASPTTDPVTFAAAQRLAEAARQAGDLRNAVRY LYLAVLLWLDDQKILPYQPSLTNREHLQRLQDWPALRDQLLPLMTTFEKTWYGLQAIDEATFAGYEQQATSLFKQVRSPN EAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36248; Mature: 36248
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRLSLIGCWLITWLIWSADVSAQPVEVSLTEYDRLLRATYTAAQRGDLLEVRALADDL CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TTIRQVRMPDGQIAPVDQSWLAEMLAQPTPDLPLISARLGALIDALEPTGSAVAADALQH HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH WEAVFNEPPFNRSQSESWLTRFLNWLFERLADLLPDLPDVPEAPVAGDSSPISGIIWVML HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH AVVALLFAGLLLFWVRGVRRVFQPVTTAASPTTDPVTFAAAQRLAEAARQAGDLRNAVRY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LYLAVLLWLDDQKILPYQPSLTNREHLQRLQDWPALRDQLLPLMTTFEKTWYGLQAIDEA HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAGYEQQATSLFKQVRSPNEAAS HHCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRLRLSLIGCWLITWLIWSADVSAQPVEVSLTEYDRLLRATYTAAQRGDLLEVRALADDL CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TTIRQVRMPDGQIAPVDQSWLAEMLAQPTPDLPLISARLGALIDALEPTGSAVAADALQH HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH WEAVFNEPPFNRSQSESWLTRFLNWLFERLADLLPDLPDVPEAPVAGDSSPISGIIWVML HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH AVVALLFAGLLLFWVRGVRRVFQPVTTAASPTTDPVTFAAAQRLAEAARQAGDLRNAVRY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LYLAVLLWLDDQKILPYQPSLTNREHLQRLQDWPALRDQLLPLMTTFEKTWYGLQAIDEA HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAGYEQQATSLFKQVRSPNEAAS HHCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA