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The map label for this gene is 222526870

Identifier: 222526870

GI number: 222526870

Start: 4538127

End: 4538759

Strand: Direct

Name: 222526870

Synonym: Chy400_3646

Alternate gene names: NA

Gene position: 4538127-4538759 (Clockwise)

Preceding gene: 222526869

Following gene: 222526871

Centisome position: 86.13

GC content: 56.71

Gene sequence:

>633_bases
ATGGTGTCTCGTTTCGTTCGCTACCTTGTGCAGTGGATTGGCCGTGTTAGCCTTAACCGTCAAACCAGAACGGATTCGGC
TGCCCCGGCTCACACTCCGTCGTCTCCTGCGCGGTTGTCTGGCTACCACCTTTCTCGCCGCAGCGGCCATTTTCGCGCTC
TTGAGCTACCTGCTGATCACGTAACCGGGTGGCTCGTTGTCCAGATCGATGGCACGCTGGGCTTTCCCGCACGTGGTATG
GCCGGTTTGGGGATTGTGGTGCGAAATGAGCACGGTGACGTGATACGTTTGTACGATGAATGTGCACCTGCTCATACCAG
TAATGAAGCTGAGTATTGGGCGTTCATCGTCGCGTTACGGCTGGTGCAACGCGACTTTCCAAATCGGCGTGTACGCTGTC
TGACCGATAGTCGGCTCGTGGTCGATCAGCTTAGCGGTGCTGCCGCGGTGCGGCGTGAACCTTTGCGCACTCTTTATTAC
ACTGCCCGCACCCTGGTCGCCCAATTTCCACCACAATCGCTTGAACTGGTAGCTATTCCCCGTGAGCTTAATCGGTTGGC
CGATGCGCTTGCGTGGGATGCGTTAGAAGGACGGCGAGCCATCCTTGATCGGTTGACAGGATTGGCTGAATAA

Upstream 100 bases:

>100_bases
AAAACCTCTTCTGGCATGCTAAGGTTACAGCGTCAATGTTCCAGCACATCAAGCCACACGCCGGCGGCCAACAGTTTTCT
CAGAAGGAGGGGGGTATGGT

Downstream 100 bases:

>100_bases
GGCTCTGCTGAGGTGAAGCGCGCCAGGATGGTCATCTGCCGGCACGCCGGCGCAGCAGGCGTGCCGGCTACCATCCAGAG
TCGTGTCCCGGAGTGTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVSRFVRYLVQWIGRVSLNRQTRTDSAAPAHTPSSPARLSGYHLSRRSGHFRALELPADHVTGWLVVQIDGTLGFPARGM
AGLGIVVRNEHGDVIRLYDECAPAHTSNEAEYWAFIVALRLVQRDFPNRRVRCLTDSRLVVDQLSGAAAVRREPLRTLYY
TARTLVAQFPPQSLELVAIPRELNRLADALAWDALEGRRAILDRLTGLAE

Sequences:

>Translated_210_residues
MVSRFVRYLVQWIGRVSLNRQTRTDSAAPAHTPSSPARLSGYHLSRRSGHFRALELPADHVTGWLVVQIDGTLGFPARGM
AGLGIVVRNEHGDVIRLYDECAPAHTSNEAEYWAFIVALRLVQRDFPNRRVRCLTDSRLVVDQLSGAAAVRREPLRTLYY
TARTLVAQFPPQSLELVAIPRELNRLADALAWDALEGRRAILDRLTGLAE
>Mature_210_residues
MVSRFVRYLVQWIGRVSLNRQTRTDSAAPAHTPSSPARLSGYHLSRRSGHFRALELPADHVTGWLVVQIDGTLGFPARGM
AGLGIVVRNEHGDVIRLYDECAPAHTSNEAEYWAFIVALRLVQRDFPNRRVRCLTDSRLVVDQLSGAAAVRREPLRTLYY
TARTLVAQFPPQSLELVAIPRELNRLADALAWDALEGRRAILDRLTGLAE

Specific function: Unknown

COG id: COG0328

COG function: function code L; Ribonuclease HI

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23534; Mature: 23534

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRFVRYLVQWIGRVSLNRQTRTDSAAPAHTPSSPARLSGYHLSRRSGHFRALELPADH
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHH
VTGWLVVQIDGTLGFPARGMAGLGIVVRNEHGDVIRLYDECAPAHTSNEAEYWAFIVALR
CCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHH
LVQRDFPNRRVRCLTDSRLVVDQLSGAAAVRREPLRTLYYTARTLVAQFPPQSLELVAIP
HHHHCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
RELNRLADALAWDALEGRRAILDRLTGLAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSRFVRYLVQWIGRVSLNRQTRTDSAAPAHTPSSPARLSGYHLSRRSGHFRALELPADH
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCHHH
VTGWLVVQIDGTLGFPARGMAGLGIVVRNEHGDVIRLYDECAPAHTSNEAEYWAFIVALR
CCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHH
LVQRDFPNRRVRCLTDSRLVVDQLSGAAAVRREPLRTLYYTARTLVAQFPPQSLELVAIP
HHHHCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
RELNRLADALAWDALEGRRAILDRLTGLAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA