Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526840
Identifier: 222526840
GI number: 222526840
Start: 4499183
End: 4500370
Strand: Direct
Name: 222526840
Synonym: Chy400_3616
Alternate gene names: NA
Gene position: 4499183-4500370 (Clockwise)
Preceding gene: 222526832
Following gene: 222526846
Centisome position: 85.39
GC content: 46.46
Gene sequence:
>1188_bases ATGAACACCCTCACAGTGTATAATTTCGGCCCAATAACATCAGCAAGTGTTACCTTTTCAGATTTGACAGTCTTTGTTGG TCCACAGGCTACAGGTAAAAGTATTTTTCTCCAGTTGCACAAATTACTGCTGGATATTGTTCCGATTCGCAATCGATTCA AGCGTTTCAATGTCGATTGGGCGGGAAAGACGAGTCATTTCCTTGAGTTGTATTTTGGTGAAGGCATGGCTAATCTGTAC CAGCCTGAGAAAACACAGATTCTCAGTAATAATATCGCTGTTCAACTAGAAAGAGTCATTTCTGAAAACAGTCGTCATCG GCAAGAGAAAGAGAAGATGTTCTACATCCCTGCGCAACGAGTGATGAGTTTGCGTGATGGATCGACCCGACCATTTACTG AGTACCGTTCAGGTGATCCCTTTGTGTTGCGTGAGTTTAGCGAAACAGTACATAACCTGCTCCAATCAGAATTCGCAGTA TCTTCGCAACTGTTCCCACCGGAACATCGCCTCAAAAAGCAATTACGAACTATGCTGCTGGAACATGTTTTTGGTAGCTT TGGGTTACAGATTGATACAGAGCACTCAGTAAAACGCATCGTCCTTAGTAGCAGAGAGGGGGAAGTAAAGCTACCGTATT CAGTGTGGTCAGCAGGTCAGCGCGAGTTTGTACCACTACTACTGGGACTTTATTGGTTGTTGCCGCCTAATCGCATGCGT CGCAATGCGCTGGAGTGGGTTGTTATTGAAGAACCTGAAATGGGTTTGCATCCAAGGGCAATCTCTGCTCTGCTGGCCCT GGTGCTAGAGCTGCTTGCACGTGGCTACAAAATCTGTATTTCGACCCACTCGCCGCATATTCTGGATATCGTTTGGGCAT TGCAGATTATGCAAAAGCATCAAGGAACAGCACAGGATGTCCTGGATATGCTCCATCTCTCCGTAGATCAGGAGACAAGA AAACTTGCTTCAAGTGCGTTAGCAAAAGGTTCAAAGGTCTATTTCTTCAAGCGCGATGGAAATGTGATCGATATTTCTGG CCTTGATCCGGGTTCAGAGGATGGTGATGAGTCTGGTTGGGGTGGATTAACGGAATTTAGTGCCAACGTGGGCGATGTGG TTGCACGTGTGGTCAATCGCTCGACCGGAGGGGCTGCGTTTCCCTTGCAAACGAGCCAATGTTTGTGA
Upstream 100 bases:
>100_bases TGATACAAACTGATCAGAAGCAGCTTGATTAAAACCGTCCTGGTTCTAAATCGTATAGAATATGCCTGTCCTCTATTCCC AATAATGTGAAAGCACGAAC
Downstream 100 bases:
>100_bases ATAAGGTAGGCGCCTTTTTAAGAACATTCATACAGAGAAATTGCACAGGGCACCACCTGTGGGTGCCCCTTCGGCATACA GTTCAGTGTACTGCCGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MNTLTVYNFGPITSASVTFSDLTVFVGPQATGKSIFLQLHKLLLDIVPIRNRFKRFNVDWAGKTSHFLELYFGEGMANLY QPEKTQILSNNIAVQLERVISENSRHRQEKEKMFYIPAQRVMSLRDGSTRPFTEYRSGDPFVLREFSETVHNLLQSEFAV SSQLFPPEHRLKKQLRTMLLEHVFGSFGLQIDTEHSVKRIVLSSREGEVKLPYSVWSAGQREFVPLLLGLYWLLPPNRMR RNALEWVVIEEPEMGLHPRAISALLALVLELLARGYKICISTHSPHILDIVWALQIMQKHQGTAQDVLDMLHLSVDQETR KLASSALAKGSKVYFFKRDGNVIDISGLDPGSEDGDESGWGGLTEFSANVGDVVARVVNRSTGGAAFPLQTSQCL
Sequences:
>Translated_395_residues MNTLTVYNFGPITSASVTFSDLTVFVGPQATGKSIFLQLHKLLLDIVPIRNRFKRFNVDWAGKTSHFLELYFGEGMANLY QPEKTQILSNNIAVQLERVISENSRHRQEKEKMFYIPAQRVMSLRDGSTRPFTEYRSGDPFVLREFSETVHNLLQSEFAV SSQLFPPEHRLKKQLRTMLLEHVFGSFGLQIDTEHSVKRIVLSSREGEVKLPYSVWSAGQREFVPLLLGLYWLLPPNRMR RNALEWVVIEEPEMGLHPRAISALLALVLELLARGYKICISTHSPHILDIVWALQIMQKHQGTAQDVLDMLHLSVDQETR KLASSALAKGSKVYFFKRDGNVIDISGLDPGSEDGDESGWGGLTEFSANVGDVVARVVNRSTGGAAFPLQTSQCL >Mature_395_residues MNTLTVYNFGPITSASVTFSDLTVFVGPQATGKSIFLQLHKLLLDIVPIRNRFKRFNVDWAGKTSHFLELYFGEGMANLY QPEKTQILSNNIAVQLERVISENSRHRQEKEKMFYIPAQRVMSLRDGSTRPFTEYRSGDPFVLREFSETVHNLLQSEFAV SSQLFPPEHRLKKQLRTMLLEHVFGSFGLQIDTEHSVKRIVLSSREGEVKLPYSVWSAGQREFVPLLLGLYWLLPPNRMR RNALEWVVIEEPEMGLHPRAISALLALVLELLARGYKICISTHSPHILDIVWALQIMQKHQGTAQDVLDMLHLSVDQETR KLASSALAKGSKVYFFKRDGNVIDISGLDPGSEDGDESGWGGLTEFSANVGDVVARVVNRSTGGAAFPLQTSQCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44544; Mature: 44544
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLTVYNFGPITSASVTFSDLTVFVGPQATGKSIFLQLHKLLLDIVPIRNRFKRFNVDW CCCEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGKTSHFLELYFGEGMANLYQPEKTQILSNNIAVQLERVISENSRHRQEKEKMFYIPAQR CCCCHHHHEEHCCCCHHHHCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHEEECCHHH VMSLRDGSTRPFTEYRSGDPFVLREFSETVHNLLQSEFAVSSQLFPPEHRLKKQLRTMLL HHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EHVFGSFGLQIDTEHSVKRIVLSSREGEVKLPYSVWSAGQREFVPLLLGLYWLLPPNRMR HHHHHHCCCEECCHHHHHHHHHCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHCCCHHHH RNALEWVVIEEPEMGLHPRAISALLALVLELLARGYKICISTHSPHILDIVWALQIMQKH HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHC QGTAQDVLDMLHLSVDQETRKLASSALAKGSKVYFFKRDGNVIDISGLDPGSEDGDESGW CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCC GGLTEFSANVGDVVARVVNRSTGGAAFPLQTSQCL CCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTLTVYNFGPITSASVTFSDLTVFVGPQATGKSIFLQLHKLLLDIVPIRNRFKRFNVDW CCCEEEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC AGKTSHFLELYFGEGMANLYQPEKTQILSNNIAVQLERVISENSRHRQEKEKMFYIPAQR CCCCHHHHEEHCCCCHHHHCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHEEECCHHH VMSLRDGSTRPFTEYRSGDPFVLREFSETVHNLLQSEFAVSSQLFPPEHRLKKQLRTMLL HHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EHVFGSFGLQIDTEHSVKRIVLSSREGEVKLPYSVWSAGQREFVPLLLGLYWLLPPNRMR HHHHHHCCCEECCHHHHHHHHHCCCCCCEECCHHHHCCCCHHHHHHHHHHHHHCCCHHHH RNALEWVVIEEPEMGLHPRAISALLALVLELLARGYKICISTHSPHILDIVWALQIMQKH HCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHC QGTAQDVLDMLHLSVDQETRKLASSALAKGSKVYFFKRDGNVIDISGLDPGSEDGDESGW CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCC GGLTEFSANVGDVVARVVNRSTGGAAFPLQTSQCL CCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA