| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is thrA [H]
Identifier: 222526825
GI number: 222526825
Start: 4480639
End: 4481703
Strand: Reverse
Name: thrA [H]
Synonym: Chy400_3600
Alternate gene names: 222526825
Gene position: 4481703-4480639 (Counterclockwise)
Preceding gene: 222526827
Following gene: 222526824
Centisome position: 85.06
GC content: 59.44
Gene sequence:
>1065_bases ATGACACCGATTATTCAACTTGGTCTTGGTGGTGTTGGTCGGGCACTTGTCCGTCAGATGCTGGCTGTGGCACCGACCAT TCGCCGACGCTATGGCATCGACTTGCGCTACACAGCCCTGGTGGACAGCCGTGGCGCACTGGCCGGCGATCCGGCACTCA CCGATGATCAGATTCAGACTGTGCTTACCGCCAAAGCGGCGGGTCATCATATTGATAGTCTTGCCCACGCTATTACTGAT CGACACTGGCTGGAACTCTTACCGGCAACGATGGCTATCGTGGTTGACGTCACGGCGGCGGGGAGTCACGCGGCACCGCT TGCTGCTGCTATCTCTGCCGGACACCGGGTGGTGCTGGCCAACAAACGACCGTTGTGTGAGAGTTATGAACTCTTTGCCG CGCTGACTGAACGTGGCGCGACCCGCTACGAAGCAACCGTCGGCGCAGGCTTACCGGTGATTGGTGTGCTGCAAAGCCTG ATCGATAGCGGCGACGAGGTACGCGCCATTGAAGCGGCCTTGAGTGGAACCCTCGGCTTTCTCATGAGTGAGCTTGAACG TGGGGTTGGCTTCGCCGATGCAGTACGCACGGCCCACCAGCTCGGTTACACCGAACCCGATCCTCGCGACGATCTGAGCG GTGCGGATGTCGCCCGTAAAGCGCTCATTCTGGCCCGTACCTGTGGCATGCATCTGCCGCCTGATGCTGTAATCGCCGAG CCACTCTTCCCGGCGACCCTGAAAGAGATCAGCGTCACCGAATTTCTCCAACGGCTTGAGGAAGCAGAACACGAGGTGAT GAACCGTTTGCAGGTGGCCAGTGCTAACGGGAAGGTGTTGCGCTACATCACCCGCATCAGTCCTGACAATGGGGTCGAGG TTGGCCTGCGCGAATTGCCCACCGATCATCCGCTCGCCAGTCTGCGCGGCCCAGATAATATGATCAGTTTCACGACGAAT CGCTACGCTGATCGCCCGCTTGTCGTCCGTGGCCCCGGCGCCGGCGTAGAAGTGACCGCAGCCGGTGTGTTGAGCGATAT TATTGCCACCGCACGAGAGTTATGA
Upstream 100 bases:
>100_bases GCGCGGCAGACCGTCAAATCCGTGCAACCGATCAGGCTGCCAGACAGCAACACACCCTGTGGTACAATAGCCGCACATTG GACGGAGACCAGGGGAAGCT
Downstream 100 bases:
>100_bases CCCTGCAAGCACAAGCTGACACAGCTCCCATAGCCCGTGATGTGCCATTGATCGACTTGCATCGCCATCTCGATGGCAAT GTGCGGCTCACCACTATCCT
Product: Homoserine dehydrogenase
Products: NA
Alternate protein names: AK-HD; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTPIIQLGLGGVGRALVRQMLAVAPTIRRRYGIDLRYTALVDSRGALAGDPALTDDQIQTVLTAKAAGHHIDSLAHAITD RHWLELLPATMAIVVDVTAAGSHAAPLAAAISAGHRVVLANKRPLCESYELFAALTERGATRYEATVGAGLPVIGVLQSL IDSGDEVRAIEAALSGTLGFLMSELERGVGFADAVRTAHQLGYTEPDPRDDLSGADVARKALILARTCGMHLPPDAVIAE PLFPATLKEISVTEFLQRLEEAEHEVMNRLQVASANGKVLRYITRISPDNGVEVGLRELPTDHPLASLRGPDNMISFTTN RYADRPLVVRGPGAGVEVTAAGVLSDIIATAREL
Sequences:
>Translated_354_residues MTPIIQLGLGGVGRALVRQMLAVAPTIRRRYGIDLRYTALVDSRGALAGDPALTDDQIQTVLTAKAAGHHIDSLAHAITD RHWLELLPATMAIVVDVTAAGSHAAPLAAAISAGHRVVLANKRPLCESYELFAALTERGATRYEATVGAGLPVIGVLQSL IDSGDEVRAIEAALSGTLGFLMSELERGVGFADAVRTAHQLGYTEPDPRDDLSGADVARKALILARTCGMHLPPDAVIAE PLFPATLKEISVTEFLQRLEEAEHEVMNRLQVASANGKVLRYITRISPDNGVEVGLRELPTDHPLASLRGPDNMISFTTN RYADRPLVVRGPGAGVEVTAAGVLSDIIATAREL >Mature_353_residues TPIIQLGLGGVGRALVRQMLAVAPTIRRRYGIDLRYTALVDSRGALAGDPALTDDQIQTVLTAKAAGHHIDSLAHAITDR HWLELLPATMAIVVDVTAAGSHAAPLAAAISAGHRVVLANKRPLCESYELFAALTERGATRYEATVGAGLPVIGVLQSLI DSGDEVRAIEAALSGTLGFLMSELERGVGFADAVRTAHQLGYTEPDPRDDLSGADVARKALILARTCGMHLPPDAVIAEP LFPATLKEISVTEFLQRLEEAEHEVMNRLQVASANGKVLRYITRISPDNGVEVGLRELPTDHPLASLRGPDNMISFTTNR YADRPLVVRGPGAGVEVTAAGVLSDIIATAREL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0460
COG function: function code E; Homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=349, Percent_Identity=35.8166189111748, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1786183, Length=342, Percent_Identity=34.7953216374269, Blast_Score=191, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6322599, Length=363, Percent_Identity=36.0881542699724, Blast_Score=170, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 37584; Mature: 37452
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS01042 HOMOSER_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIIQLGLGGVGRALVRQMLAVAPTIRRRYGIDLRYTALVDSRGALAGDPALTDDQIQT CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHH VLTAKAAGHHIDSLAHAITDRHWLELLPATMAIVVDVTAAGSHAAPLAAAISAGHRVVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEE NKRPLCESYELFAALTERGATRYEATVGAGLPVIGVLQSLIDSGDEVRAIEAALSGTLGF CCCCCHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMSELERGVGFADAVRTAHQLGYTEPDPRDDLSGADVARKALILARTCGMHLPPDAVIAE HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHC PLFPATLKEISVTEFLQRLEEAEHEVMNRLQVASANGKVLRYITRISPDNGVEVGLRELP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHCC TDHPLASLRGPDNMISFTTNRYADRPLVVRGPGAGVEVTAAGVLSDIIATAREL CCCCHHHCCCCCCEEEEECCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure TPIIQLGLGGVGRALVRQMLAVAPTIRRRYGIDLRYTALVDSRGALAGDPALTDDQIQT CCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHH VLTAKAAGHHIDSLAHAITDRHWLELLPATMAIVVDVTAAGSHAAPLAAAISAGHRVVLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEE NKRPLCESYELFAALTERGATRYEATVGAGLPVIGVLQSLIDSGDEVRAIEAALSGTLGF CCCCCHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMSELERGVGFADAVRTAHQLGYTEPDPRDDLSGADVARKALILARTCGMHLPPDAVIAE HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHC PLFPATLKEISVTEFLQRLEEAEHEVMNRLQVASANGKVLRYITRISPDNGVEVGLRELP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHCC TDHPLASLRGPDNMISFTTNRYADRPLVVRGPGAGVEVTAAGVLSDIIATAREL CCCCHHHCCCCCCEEEEECCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]