| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526821
Identifier: 222526821
GI number: 222526821
Start: 4475920
End: 4476462
Strand: Reverse
Name: 222526821
Synonym: Chy400_3596
Alternate gene names: NA
Gene position: 4476462-4475920 (Counterclockwise)
Preceding gene: 222526822
Following gene: 222526820
Centisome position: 84.96
GC content: 65.38
Gene sequence:
>543_bases ATGGCACAGGCACCATCCGTAGGCTATGCATTACCCATAACGCGAATACTGCATTGCCCGCGTGCCGGAGCGGGTCGGGG GAGTGATGACGGGCGTGCTCCCCAGCCGGGAGCTGGGAGCGCGCGCCTCCGGCGCGCATGGTGCCGGTACCAGTGCTGGA GGGAGGAGCCAGGCGCAAGCTCCCGCCCCTGGCGGCATTCACGGACGGCCAGGATAGATGATCGAACGCAACGTCTACCC TATCAGAAAGCCCTGGATCACACGTCTGCCCTCCCATCACCCGCCCCCGCTATGCATTACCCACAACTGGTGTCAACCAC ATGCGTATCAGCGGGGATGATCGCCATAGGTGCTGTTGTGGGCGACTGGCCCGATGGCAGAGCGCTGCTCCAGCCGTGCC GGCACGTGCTGGATGGATTGCTGTACCCGCTCGGCATGCGCGTGTCTCGCAGTTTGGAGTGCGGCAGCCATGCTGCCGCG CCAGCCGTGCTCACGATCCGGCGCGTGGCATACCGTTCCCCATCCTGGTCACGGGGGTGCTGA
Upstream 100 bases:
>100_bases CGTAGAGGAATGAGATCACATCTGGATACATCCGATACACTACATGCGATTTAGACATTCTCTTCTCTCATTCACCGCAT CCCTTGTATAGTTAAGGTTA
Downstream 100 bases:
>100_bases ATGTGCTCATACCGATCATCGAGTCGGTCCGGCATGCATGCGATACCCCTGCGTGTAGACGGTTATGTTGTAAGAGATTC GTGCCTGCGCACCAGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGASSRPWRHSRTARIDDRTQRLP YQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVVGDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAA PAVLTIRRVAYRSPSWSRGC
Sequences:
>Translated_180_residues MAQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGASSRPWRHSRTARIDDRTQRLP YQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVVGDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAA PAVLTIRRVAYRSPSWSRGC >Mature_179_residues AQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGASSRPWRHSRTARIDDRTQRLPY QKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVVGDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAAP AVLTIRRVAYRSPSWSRGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19563; Mature: 19431
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGAS CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC SRPWRHSRTARIDDRTQRLPYQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVV CCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAAPAVLTIRRVAYRSPSWSRGC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AQAPSVGYALPITRILHCPRAGAGRGSDDGRAPQPGAGSARLRRAWCRYQCWREEPGAS CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC SRPWRHSRTARIDDRTQRLPYQKALDHTSALPSPAPAMHYPQLVSTTCVSAGMIAIGAVV CCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GDWPDGRALLQPCRHVLDGLLYPLGMRVSRSLECGSHAAAPAVLTIRRVAYRSPSWSRGC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA