| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526797
Identifier: 222526797
GI number: 222526797
Start: 4448078
End: 4450132
Strand: Direct
Name: 222526797
Synonym: Chy400_3571
Alternate gene names: NA
Gene position: 4448078-4450132 (Clockwise)
Preceding gene: 222526796
Following gene: 222526798
Centisome position: 84.42
GC content: 59.66
Gene sequence:
>2055_bases ATGAAGCGAGTTGTCAGTATCAGTCTTGGCTCGTCACTCCGTGATTATCAGATCACGGTGAAGGTTTTGGGGCAGCATGT CGAGGTGCGTCGCATCGGTACGAACGGCGATGTTGCGCAAGCCATGGCGCTGGTACGCGAGTTTGATGGCAAGGTGGACG CTATCGGACTCGGTGGTTTAACACCGGTTTTTCGCATCGGTCGGGCACGCTATCCCCATCAGGAAGCCATCCATATCGCA GCTCAGGCCCAGCGAACACCGGTCGTTGATGGGGGTGTGGTCAAGGCGACGCTTGAGCGCTGGGCGATTGCGCAGGCAGT GCGCCAGCTTCCTTCATTGTTGCGTTACAAGCGGGTGCTGATTACCAGCGGCGTTGAACGTTATCAATTGGCTGCTGCTA TCAGTCAGTACGAACCGGAGTTGCGCTTCGCCGATCCGATCATTCACGCCGGGATTCCTTTCCTGCCACCACCACGCTCG CTCGAACAGCTTGAACTCTACGCGGCAACCGCGTTACCGATCCTCGCCCTTCTCCCCTATCGCTTTATCCATCCGGTGGC GCTCGGCCAGGAAGGTTTTGACAGCCGTGCAGTTGAACTATTCCGCTGGGCGGATGTGATTGCCGGCGATTTTGCCTTCA TTCGGCGCTTTGCCCCCAATGATCTGACGCGCAAGACGATTATCACCGATGACCCCTCACCTGCCGAGATCGAAGATCTG CGGCGACGCGGCGTAACGACGCTGGTGACGATGACGCCACCTCTCAGTAATGAGCGGCCCTTCCTCGCCGCCGATGCGCT GGAGGCGGTGATTACGGCGATTACCGAGAGCACGCGCCAACCGGGAGACGCTGAGGTGATCGACTTTATTACGGCAGCCG GTTGGGGGCCGACGGTGCAAGACCTGAACCCGCGCCCCAAGCCGCGCTTCGCATTTGTCATTCACCCGCTGCGTACCGAA CTGATCGCCAATCACAAATGGTTCCGCTGGACACGCTATATGCCACAGCGCCTGGTGGAGCTGGTGGCGGCTCATTTCCC GCCCCTTTACCTCTCGCGCATCCGTGGCATTCGCTCGAAGGCCACCGGTGAAGAGGTTGAGGGGATTCTGTTGACGCTGG GAACGACACCGCGCGAGATGATGCGCCGTCCGCCCGGTTTTACCTACCGCCGCCTGATCAAAGCCGCCCGAATGGCCGAA CGGATGGGAGCGCAGATTATGGGGTTGGGAGCCTTCACGTCGGTTGTCGGTGATGCCGGTATTACGGTGGCGCAGAAGGT GGATATTGGCATTACATCGGGCAACTCGCTGACGGTAGCCGCGACGCTGGAAGCGGCCAAGCAGGCGGTAGTGCTGATGA AGGGAGGACGCCCTGAGCGGGTACGGGCAGTCGTGATTGGCGCCACGGGTTCGATTGGCGCAGTCTGTGCCCGCTTGCTG GCCCAGGCCGTCCACGATGTAGTCCTGGTGGCACCACGCGCCGAACGTCTGATCGCGCTCAAGAAGCAGATCGAGGCCGA GACGCCGGGCGCACGGGTGGTGGCCGCGACCTACGCCGATGCCTACATTGGTGATGCCGATCTGATCATCACAACCACCA GCGCCCTGACCGGTAAAGTGATCAACATCGACAAACTCAAACCTGGTGCAGTGGTCTGTGATGTGGCCCGTCCGCCAGAC GTGAAGGAGGAAGACGCCCGGCGGCGCCCTGATGTGCTGGTGATTGAAAGTGGTGAGATTGTATTGCCGGGCGAACCGGA TTTTGGCTTCGATATAGATATGCCGCCTGGTACAGCCTACGCCTGTTTGTCAGAGACGGCGCTGCTGGCGATGGAAGGTA AATTTGAAGACTACACGCTAGGCCGTAATATCGAGATCGAACGGGTTAAGGAGGTCTATCGGCTGTGGAAGAAGCATGGC CTTGAACTAGCCCGCCTGCGCTCGTTTGGGGTCTACGTTACCGATGAGATGATCGCCGAAAAGCGCCGCCTGGCCGAAGA GCGTCGTCGCCAGTTGGGCTTGCCTGCCGAGAAGGTGCTGGATCAATCATCGTGA
Upstream 100 bases:
>100_bases ACGGCATTGCGGGTGTAGAGATCACAACGCCATCACGCGATTCTGAACGCCGGGCCGTGACAATCTGGTATACTGACGCC AATAGCGCGAGGAGGCGGTT
Downstream 100 bases:
>100_bases GCACTGTACAACTTGAATGGATTACGACACAGCCATCATCGCCACGACCAGCACCACCTGTCGTGCTGGTCCACGGTGCC TGGCATGGGGCCTGGTGCTG
Product: Shikimate/quinate 5-dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; Aminotransferase Class-III; Dehydrogenase-Like Protein; Dehydrogenase-Like; Class-III Aminotransferase; Ornithine/Acetylornithine Aminotransferase; Aminotransferase; Acyl-ACP Reductase; Dehydrogenase Like; Acetylornithine Transaminase; Aminotransferase Class-Iii; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MKRVVSISLGSSLRDYQITVKVLGQHVEVRRIGTNGDVAQAMALVREFDGKVDAIGLGGLTPVFRIGRARYPHQEAIHIA AQAQRTPVVDGGVVKATLERWAIAQAVRQLPSLLRYKRVLITSGVERYQLAAAISQYEPELRFADPIIHAGIPFLPPPRS LEQLELYAATALPILALLPYRFIHPVALGQEGFDSRAVELFRWADVIAGDFAFIRRFAPNDLTRKTIITDDPSPAEIEDL RRRGVTTLVTMTPPLSNERPFLAADALEAVITAITESTRQPGDAEVIDFITAAGWGPTVQDLNPRPKPRFAFVIHPLRTE LIANHKWFRWTRYMPQRLVELVAAHFPPLYLSRIRGIRSKATGEEVEGILLTLGTTPREMMRRPPGFTYRRLIKAARMAE RMGAQIMGLGAFTSVVGDAGITVAQKVDIGITSGNSLTVAATLEAAKQAVVLMKGGRPERVRAVVIGATGSIGAVCARLL AQAVHDVVLVAPRAERLIALKKQIEAETPGARVVAATYADAYIGDADLIITTTSALTGKVINIDKLKPGAVVCDVARPPD VKEEDARRRPDVLVIESGEIVLPGEPDFGFDIDMPPGTAYACLSETALLAMEGKFEDYTLGRNIEIERVKEVYRLWKKHG LELARLRSFGVYVTDEMIAEKRRLAEERRRQLGLPAEKVLDQSS
Sequences:
>Translated_684_residues MKRVVSISLGSSLRDYQITVKVLGQHVEVRRIGTNGDVAQAMALVREFDGKVDAIGLGGLTPVFRIGRARYPHQEAIHIA AQAQRTPVVDGGVVKATLERWAIAQAVRQLPSLLRYKRVLITSGVERYQLAAAISQYEPELRFADPIIHAGIPFLPPPRS LEQLELYAATALPILALLPYRFIHPVALGQEGFDSRAVELFRWADVIAGDFAFIRRFAPNDLTRKTIITDDPSPAEIEDL RRRGVTTLVTMTPPLSNERPFLAADALEAVITAITESTRQPGDAEVIDFITAAGWGPTVQDLNPRPKPRFAFVIHPLRTE LIANHKWFRWTRYMPQRLVELVAAHFPPLYLSRIRGIRSKATGEEVEGILLTLGTTPREMMRRPPGFTYRRLIKAARMAE RMGAQIMGLGAFTSVVGDAGITVAQKVDIGITSGNSLTVAATLEAAKQAVVLMKGGRPERVRAVVIGATGSIGAVCARLL AQAVHDVVLVAPRAERLIALKKQIEAETPGARVVAATYADAYIGDADLIITTTSALTGKVINIDKLKPGAVVCDVARPPD VKEEDARRRPDVLVIESGEIVLPGEPDFGFDIDMPPGTAYACLSETALLAMEGKFEDYTLGRNIEIERVKEVYRLWKKHG LELARLRSFGVYVTDEMIAEKRRLAEERRRQLGLPAEKVLDQSS >Mature_684_residues MKRVVSISLGSSLRDYQITVKVLGQHVEVRRIGTNGDVAQAMALVREFDGKVDAIGLGGLTPVFRIGRARYPHQEAIHIA AQAQRTPVVDGGVVKATLERWAIAQAVRQLPSLLRYKRVLITSGVERYQLAAAISQYEPELRFADPIIHAGIPFLPPPRS LEQLELYAATALPILALLPYRFIHPVALGQEGFDSRAVELFRWADVIAGDFAFIRRFAPNDLTRKTIITDDPSPAEIEDL RRRGVTTLVTMTPPLSNERPFLAADALEAVITAITESTRQPGDAEVIDFITAAGWGPTVQDLNPRPKPRFAFVIHPLRTE LIANHKWFRWTRYMPQRLVELVAAHFPPLYLSRIRGIRSKATGEEVEGILLTLGTTPREMMRRPPGFTYRRLIKAARMAE RMGAQIMGLGAFTSVVGDAGITVAQKVDIGITSGNSLTVAATLEAAKQAVVLMKGGRPERVRAVVIGATGSIGAVCARLL AQAVHDVVLVAPRAERLIALKKQIEAETPGARVVAATYADAYIGDADLIITTTSALTGKVINIDKLKPGAVVCDVARPPD VKEEDARRRPDVLVIESGEIVLPGEPDFGFDIDMPPGTAYACLSETALLAMEGKFEDYTLGRNIEIERVKEVYRLWKKHG LELARLRSFGVYVTDEMIAEKRRLAEERRRQLGLPAEKVLDQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75211; Mature: 75211
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVVSISLGSSLRDYQITVKVLGQHVEVRRIGTNGDVAQAMALVREFDGKVDAIGLGGL CCEEEEEECCCCCCHHEEEEEHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCC TPVFRIGRARYPHQEAIHIAAQAQRTPVVDGGVVKATLERWAIAQAVRQLPSLLRYKRVL CHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITSGVERYQLAAAISQYEPELRFADPIIHAGIPFLPPPRSLEQLELYAATALPILALLPY HHCCHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RFIHPVALGQEGFDSRAVELFRWADVIAGDFAFIRRFAPNDLTRKTIITDDPSPAEIEDL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHH RRRGVTTLVTMTPPLSNERPFLAADALEAVITAITESTRQPGDAEVIDFITAAGWGPTVQ HHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC DLNPRPKPRFAFVIHPLRTELIANHKWFRWTRYMPQRLVELVAAHFPPLYLSRIRGIRSK CCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC ATGEEVEGILLTLGTTPREMMRRPPGFTYRRLIKAARMAERMGAQIMGLGAFTSVVGDAG CCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCC ITVAQKVDIGITSGNSLTVAATLEAAKQAVVLMKGGRPERVRAVVIGATGSIGAVCARLL CEEEEEEEEEEECCCCEEEEEEHHHHHCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHH AQAVHDVVLVAPRAERLIALKKQIEAETPGARVVAATYADAYIGDADLIITTTSALTGKV HHHHHHHEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCEEEEECHHHCCCE INIDKLKPGAVVCDVARPPDVKEEDARRRPDVLVIESGEIVLPGEPDFGFDIDMPPGTAY EEECCCCCCCEEEECCCCCCCCCHHHHCCCCEEEEECCCEEECCCCCCCEECCCCCCCHH ACLSETALLAMEGKFEDYTLGRNIEIERVKEVYRLWKKHGLELARLRSFGVYVTDEMIAE HHHHCCEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEHHHHCCCEEEHHHHHH KRRLAEERRRQLGLPAEKVLDQSS HHHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure MKRVVSISLGSSLRDYQITVKVLGQHVEVRRIGTNGDVAQAMALVREFDGKVDAIGLGGL CCEEEEEECCCCCCHHEEEEEHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCC TPVFRIGRARYPHQEAIHIAAQAQRTPVVDGGVVKATLERWAIAQAVRQLPSLLRYKRVL CHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITSGVERYQLAAAISQYEPELRFADPIIHAGIPFLPPPRSLEQLELYAATALPILALLPY HHCCHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RFIHPVALGQEGFDSRAVELFRWADVIAGDFAFIRRFAPNDLTRKTIITDDPSPAEIEDL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHH RRRGVTTLVTMTPPLSNERPFLAADALEAVITAITESTRQPGDAEVIDFITAAGWGPTVQ HHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC DLNPRPKPRFAFVIHPLRTELIANHKWFRWTRYMPQRLVELVAAHFPPLYLSRIRGIRSK CCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC ATGEEVEGILLTLGTTPREMMRRPPGFTYRRLIKAARMAERMGAQIMGLGAFTSVVGDAG CCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCC ITVAQKVDIGITSGNSLTVAATLEAAKQAVVLMKGGRPERVRAVVIGATGSIGAVCARLL CEEEEEEEEEEECCCCEEEEEEHHHHHCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHH AQAVHDVVLVAPRAERLIALKKQIEAETPGARVVAATYADAYIGDADLIITTTSALTGKV HHHHHHHEEECCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCEEEEECHHHCCCE INIDKLKPGAVVCDVARPPDVKEEDARRRPDVLVIESGEIVLPGEPDFGFDIDMPPGTAY EEECCCCCCCEEEECCCCCCCCCHHHHCCCCEEEEECCCEEECCCCCCCEECCCCCCCHH ACLSETALLAMEGKFEDYTLGRNIEIERVKEVYRLWKKHGLELARLRSFGVYVTDEMIAE HHHHCCEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEHHHHCCCEEEHHHHHH KRRLAEERRRQLGLPAEKVLDQSS HHHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA