| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526791
Identifier: 222526791
GI number: 222526791
Start: 4441365
End: 4442252
Strand: Direct
Name: 222526791
Synonym: Chy400_3565
Alternate gene names: NA
Gene position: 4441365-4442252 (Clockwise)
Preceding gene: 222526790
Following gene: 222526792
Centisome position: 84.29
GC content: 58.33
Gene sequence:
>888_bases ATGACGCAACGAATTGTCAATATCGGTCTGGTGCAGATGCGCTGTACCGCCGATCCTGACTTCAATATGGCGACGGCGGA AGCCGGGATTCGGGCTGCGGCGGCGCAGGGGGCGCAGATTGTGTGTCTGCCGGAGCTGTTTCGTTCGCTCTATTTCTGTC AGAGCGAGAATCATGTTTTCTTCGCTCTGGCCGAGCCGGTGCCCGGCCCCAGTACCGAGCGGCTCAGTAAATTGGCTGCT GAGTTGCAGGTGGTGATTGTGGCCAGTCTGTTCGAGAAACGGGCGGAAGGTCTCTACCACAATACGGCGGCGGTGATCGA TGCTGATGGCCGGTATCTGGGGAAGTACCGTAAGATGCACATTCCCGATGATCCGCTCTTCTACGAGAAGTTTTATTTCA CGCCGGGTGATCTGGGGTTCAAGGTGTTCAAAACACGCTACGCCCGGATCGGGGTGCTAATCTGCTGGGATCAGTGGTAC CCCGAAGCGGCCCGGCTCACGGCGCTGCGCGGAGCCGATGTGCTCTGTTATCCGACGGCAATTGGCTGGCATCCCGCCGA GAAGGCTGAGTACGGTGTAGCGCAACATCAGAGCTGGGAGATTATCCAGCGCTCACACGGGATTGCCAACGGTTGTTACG TCGTGAGCATCAATCGTACCGGTCACGAAGGTGATCCTGCCGGTGGGATCGAGTTCTGGGGGCAGAGCTTTATCTCCGAT CCTTCGGGAACGGTGATCGTGCGGGCGCCGGTTGATGAGCCGGCGGTGCTGGTCGCCCCCATCGATCTGGCAAAGATTGA TGTGCAGCGTACTCACTGGCCATTTCTGCGCGACCGCCGGATTGATGCCTACGGTGAGATTACGCGCCGTTATCTTGATG AGGAGTAA
Upstream 100 bases:
>100_bases GTACGTCGCCGGTCGAGCTGCGGAAGCAGCGATCCGACGTGGCGAATTGCGCTGGATTAGTAATGGTGAGTGGTGATACC ACATGACCCTGGAGAAGACC
Downstream 100 bases:
>100_bases GCGTTATGGCAACCCCTGCCGAACTGGGTTACCGGATGCCCGCCGAATGGGAACCGCATCAGGCTACGTGGCTTTCGTGG CCGCATAAAGAGGAGAGCTG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTQRIVNIGLVQMRCTADPDFNMATAEAGIRAAAAQGAQIVCLPELFRSLYFCQSENHVFFALAEPVPGPSTERLSKLAA ELQVVIVASLFEKRAEGLYHNTAAVIDADGRYLGKYRKMHIPDDPLFYEKFYFTPGDLGFKVFKTRYARIGVLICWDQWY PEAARLTALRGADVLCYPTAIGWHPAEKAEYGVAQHQSWEIIQRSHGIANGCYVVSINRTGHEGDPAGGIEFWGQSFISD PSGTVIVRAPVDEPAVLVAPIDLAKIDVQRTHWPFLRDRRIDAYGEITRRYLDEE
Sequences:
>Translated_295_residues MTQRIVNIGLVQMRCTADPDFNMATAEAGIRAAAAQGAQIVCLPELFRSLYFCQSENHVFFALAEPVPGPSTERLSKLAA ELQVVIVASLFEKRAEGLYHNTAAVIDADGRYLGKYRKMHIPDDPLFYEKFYFTPGDLGFKVFKTRYARIGVLICWDQWY PEAARLTALRGADVLCYPTAIGWHPAEKAEYGVAQHQSWEIIQRSHGIANGCYVVSINRTGHEGDPAGGIEFWGQSFISD PSGTVIVRAPVDEPAVLVAPIDLAKIDVQRTHWPFLRDRRIDAYGEITRRYLDEE >Mature_294_residues TQRIVNIGLVQMRCTADPDFNMATAEAGIRAAAAQGAQIVCLPELFRSLYFCQSENHVFFALAEPVPGPSTERLSKLAAE LQVVIVASLFEKRAEGLYHNTAAVIDADGRYLGKYRKMHIPDDPLFYEKFYFTPGDLGFKVFKTRYARIGVLICWDQWYP EAARLTALRGADVLCYPTAIGWHPAEKAEYGVAQHQSWEIIQRSHGIANGCYVVSINRTGHEGDPAGGIEFWGQSFISDP SGTVIVRAPVDEPAVLVAPIDLAKIDVQRTHWPFLRDRRIDAYGEITRRYLDEE
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=285, Percent_Identity=34.0350877192982, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI7706509, Length=306, Percent_Identity=30.0653594771242, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI297632350, Length=290, Percent_Identity=27.9310344827586, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI297632348, Length=290, Percent_Identity=27.9310344827586, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI5031947, Length=290, Percent_Identity=27.9310344827586, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI297632346, Length=185, Percent_Identity=27.5675675675676, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17533173, Length=275, Percent_Identity=33.8181818181818, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17556280, Length=285, Percent_Identity=27.719298245614, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323383, Length=303, Percent_Identity=26.7326732673267, Blast_Score=108, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6322335, Length=318, Percent_Identity=24.5283018867925, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI21358471, Length=277, Percent_Identity=31.4079422382672, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI21355835, Length=292, Percent_Identity=27.7397260273973, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI17933642, Length=283, Percent_Identity=25.4416961130742, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 33053; Mature: 32922
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRIVNIGLVQMRCTADPDFNMATAEAGIRAAAAQGAQIVCLPELFRSLYFCQSENHVF CCCEEEEEEEEEEEECCCCCCCEEHHHHCHHHHHCCCCEEEEHHHHHHHHHEECCCCCEE FALAEPVPGPSTERLSKLAAELQVVIVASLFEKRAEGLYHNTAAVIDADGRYLGKYRKMH EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCEEECC IPDDPLFYEKFYFTPGDLGFKVFKTRYARIGVLICWDQWYPEAARLTALRGADVLCYPTA CCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEECCCCCCHHHEEEECCCCEEEECCC IGWHPAEKAEYGVAQHQSWEIIQRSHGIANGCYVVSINRTGHEGDPAGGIEFWGQSFISD CCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCC PSGTVIVRAPVDEPAVLVAPIDLAKIDVQRTHWPFLRDRRIDAYGEITRRYLDEE CCCEEEEECCCCCCEEEEEECCEEEEEECCCCCCCHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TQRIVNIGLVQMRCTADPDFNMATAEAGIRAAAAQGAQIVCLPELFRSLYFCQSENHVF CCEEEEEEEEEEEECCCCCCCEEHHHHCHHHHHCCCCEEEEHHHHHHHHHEECCCCCEE FALAEPVPGPSTERLSKLAAELQVVIVASLFEKRAEGLYHNTAAVIDADGRYLGKYRKMH EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCEEECC IPDDPLFYEKFYFTPGDLGFKVFKTRYARIGVLICWDQWYPEAARLTALRGADVLCYPTA CCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEECCCCCCHHHEEEECCCCEEEECCC IGWHPAEKAEYGVAQHQSWEIIQRSHGIANGCYVVSINRTGHEGDPAGGIEFWGQSFISD CCCCCCCHHHCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCC PSGTVIVRAPVDEPAVLVAPIDLAKIDVQRTHWPFLRDRRIDAYGEITRRYLDEE CCCEEEEECCCCCCEEEEEECCEEEEEECCCCCCCHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]