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The map label for this gene is glpC [H]

Identifier: 222526775

GI number: 222526775

Start: 4421033

End: 4422259

Strand: Reverse

Name: glpC [H]

Synonym: Chy400_3549

Alternate gene names: 222526775

Gene position: 4422259-4421033 (Counterclockwise)

Preceding gene: 222526776

Following gene: 222526774

Centisome position: 83.93

GC content: 58.76

Gene sequence:

>1227_bases
ATGGATCACATCGAGCTATCGCTCACGCAATCGCTTGATCACTGCATCAAGTGCAACATCTGCACGTCCGCCTGTCCGGT
GGCAGCAGTGACCGATGCCTTTCCTGGCCCGAAATACGTTGGGCCACAAGCGCAACGTTTTCGCCATGCTGCACAGCCCG
TTCCCGACGCCTCGGTTGATTATTGCTCAGGTTGCCGGGTATGTAACCAGGTCTGCCCAACCGGGGTGCGCATTGCCGAA
TTAAATGCCCGTGCCCGCGCCCAGATCGTGGCCGAACGCGGTATGCCGCTCCGCAATCGAATCATTGCCCGCTCTGGCCT
GGTTGGACGGCTGAGCTGCGGCCCGCACGCCCCACTGGTGAATTTCACGCTTCAGTTCGCCCCGGCCCGCTGGCTCATCG
AGCAGGTGATGGGTATTCACCGCCATGCGCCACTGCCTAAAGCCAGCACCTACACGTTTCGGCGCTGGTTCCAACGTCGC
AAAGCGACAGCGGCCGGTCGCCGTCCACAGGTGGTCTACTTCCACGGTTGCAGCACCAACTTTTACGAACCACACGTTGG
CAAAGCTGCCATCGCCGTCCTCGAACACCTTGGCTTCGAGGTGATCATTCCATCCCAACGCTGTTGTGGTTTGCCGTTAC
TCTCCAACGGCGATTTTCCGGCGGCGCAGAAGCATCACGAATACAATGTTGCGCAACTCTTACCGTATGCACGTGCCGGT
ATTCCGATTGTTGGCACCAGCACCAGTTGCACGCTCACCCTGAAAGAAGAAGCGCCAGAACTGCTCGGATTACACGGTGA
TGATGTGCGAGCAGTAGCTGCCGGCACCTACGACATCTTTGAATTTCTGCGCGATCTGCACGAACAGGGTCGGTTGCGTA
CCGATTTTCGCCCGCTGGAACGCAGCCTGCCCTACCATCCACCGTGCCAGTTACGTGCGCACCGGATCGGACGCCCGGTA
CTCGACGTGTTGAGTCTGGTTCCTGGTCTGCGCCTGCACGAAAGCCGCGCCGAGTGCTGCGGTATTGCCGGAACGTATGG
GTTGAAACGCGAGAAGTACCAGATCGCAATGGATGTTGGCAAGCCGCTGTTCGAGTTTGTGCGTTCAAGCGGTCAACAGC
TTGCGCTTTGCGATAGCGAGACCTGTCGCTGGCAAATTAGCGGCGCTACCGGCGTTACCACCCGCCATCCAATCGAGATT
CTGGCCGAAGCATACGGCCTTATGTAG

Upstream 100 bases:

>100_bases
GCCGGTTTTGACCCGATTCGGGAAGGATGCCTTGAGGGTGTCGCTATTGCCACCGGCTGGAAAGCCGGGCAGCAGTAGTC
GGCCAAGAGGAATAAACGCT

Downstream 100 bases:

>100_bases
AGCCGTAAAGCCGTATCACGAACTATCGCCTGGTTTGAGGTGCGGAGTCCACGCTTCCGCACCTACCGCATTTACTGCCG
GACATTGGGCTTAACGTGCG

Product: sn-glycerol-3-phosphate dehydrogenase subunit C

Products: glycerone phosphate; reduced acceptor

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MDHIELSLTQSLDHCIKCNICTSACPVAAVTDAFPGPKYVGPQAQRFRHAAQPVPDASVDYCSGCRVCNQVCPTGVRIAE
LNARARAQIVAERGMPLRNRIIARSGLVGRLSCGPHAPLVNFTLQFAPARWLIEQVMGIHRHAPLPKASTYTFRRWFQRR
KATAAGRRPQVVYFHGCSTNFYEPHVGKAAIAVLEHLGFEVIIPSQRCCGLPLLSNGDFPAAQKHHEYNVAQLLPYARAG
IPIVGTSTSCTLTLKEEAPELLGLHGDDVRAVAAGTYDIFEFLRDLHEQGRLRTDFRPLERSLPYHPPCQLRAHRIGRPV
LDVLSLVPGLRLHESRAECCGIAGTYGLKREKYQIAMDVGKPLFEFVRSSGQQLALCDSETCRWQISGATGVTTRHPIEI
LAEAYGLM

Sequences:

>Translated_408_residues
MDHIELSLTQSLDHCIKCNICTSACPVAAVTDAFPGPKYVGPQAQRFRHAAQPVPDASVDYCSGCRVCNQVCPTGVRIAE
LNARARAQIVAERGMPLRNRIIARSGLVGRLSCGPHAPLVNFTLQFAPARWLIEQVMGIHRHAPLPKASTYTFRRWFQRR
KATAAGRRPQVVYFHGCSTNFYEPHVGKAAIAVLEHLGFEVIIPSQRCCGLPLLSNGDFPAAQKHHEYNVAQLLPYARAG
IPIVGTSTSCTLTLKEEAPELLGLHGDDVRAVAAGTYDIFEFLRDLHEQGRLRTDFRPLERSLPYHPPCQLRAHRIGRPV
LDVLSLVPGLRLHESRAECCGIAGTYGLKREKYQIAMDVGKPLFEFVRSSGQQLALCDSETCRWQISGATGVTTRHPIEI
LAEAYGLM
>Mature_408_residues
MDHIELSLTQSLDHCIKCNICTSACPVAAVTDAFPGPKYVGPQAQRFRHAAQPVPDASVDYCSGCRVCNQVCPTGVRIAE
LNARARAQIVAERGMPLRNRIIARSGLVGRLSCGPHAPLVNFTLQFAPARWLIEQVMGIHRHAPLPKASTYTFRRWFQRR
KATAAGRRPQVVYFHGCSTNFYEPHVGKAAIAVLEHLGFEVIIPSQRCCGLPLLSNGDFPAAQKHHEYNVAQLLPYARAG
IPIVGTSTSCTLTLKEEAPELLGLHGDDVRAVAAGTYDIFEFLRDLHEQGRLRTDFRPLERSLPYHPPCQLRAHRIGRPV
LDVLSLVPGLRLHESRAECCGIAGTYGLKREKYQIAMDVGKPLFEFVRSSGQQLALCDSETCRWQISGATGVTTRHPIEI
LAEAYGLM

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=397, Percent_Identity=37.5314861460957, Blast_Score=281, Evalue=7e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: 1.1.99.5

Molecular weight: Translated: 45075; Mature: 45075

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHIELSLTQSLDHCIKCNICTSACPVAAVTDAFPGPKYVGPQAQRFRHAAQPVPDASVD
CCCEEEHHHHHHHHHEECCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
YCSGCRVCNQVCPTGVRIAELNARARAQIVAERGMPLRNRIIARSGLVGRLSCGPHAPLV
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCEE
NFTLQFAPARWLIEQVMGIHRHAPLPKASTYTFRRWFQRRKATAAGRRPQVVYFHGCSTN
EEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
FYEPHVGKAAIAVLEHLGFEVIIPSQRCCGLPLLSNGDFPAAQKHHEYNVAQLLPYARAG
CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCCCHHCCCCCHHHHHHHHHCC
IPIVGTSTSCTLTLKEEAPELLGLHGDDVRAVAAGTYDIFEFLRDLHEQGRLRTDFRPLE
CEEEECCCEEEEEECCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHH
RSLPYHPPCQLRAHRIGRPVLDVLSLVPGLRLHESRAECCGIAGTYGLKREKYQIAMDVG
HCCCCCCCHHHHHHHCCCHHHHHHHHCCCCEEHHCHHHHHCCCCCCCCCCCCEEEEHHCC
KPLFEFVRSSGQQLALCDSETCRWQISGATGVTTRHPIEILAEAYGLM
HHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDHIELSLTQSLDHCIKCNICTSACPVAAVTDAFPGPKYVGPQAQRFRHAAQPVPDASVD
CCCEEEHHHHHHHHHEECCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
YCSGCRVCNQVCPTGVRIAELNARARAQIVAERGMPLRNRIIARSGLVGRLSCGPHAPLV
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCEE
NFTLQFAPARWLIEQVMGIHRHAPLPKASTYTFRRWFQRRKATAAGRRPQVVYFHGCSTN
EEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
FYEPHVGKAAIAVLEHLGFEVIIPSQRCCGLPLLSNGDFPAAQKHHEYNVAQLLPYARAG
CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEECCCCCCCCHHCCCCCHHHHHHHHHCC
IPIVGTSTSCTLTLKEEAPELLGLHGDDVRAVAAGTYDIFEFLRDLHEQGRLRTDFRPLE
CEEEECCCEEEEEECCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHH
RSLPYHPPCQLRAHRIGRPVLDVLSLVPGLRLHESRAECCGIAGTYGLKREKYQIAMDVG
HCCCCCCCHHHHHHHCCCHHHHHHHHCCCCEEHHCHHHHHCCCCCCCCCCCCEEEEHHCC
KPLFEFVRSSGQQLALCDSETCRWQISGATGVTTRHPIEILAEAYGLM
HHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]