| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526771
Identifier: 222526771
GI number: 222526771
Start: 4415030
End: 4415557
Strand: Direct
Name: 222526771
Synonym: Chy400_3545
Alternate gene names: NA
Gene position: 4415030-4415557 (Clockwise)
Preceding gene: 222526770
Following gene: 222526772
Centisome position: 83.79
GC content: 54.92
Gene sequence:
>528_bases ATGCATCTGATCAAGAAATACGCGAATCGCAAACTGTATCATACGAATCAGAAACGTTACATTACCCTCGATGGTATTGC CCGATTGGTGCAGGAGGGTGAAACTGTTCAGGTACTCGACAACGAGACCGGCGACGATATTACCGCTAACATTCTGGCCC AGGTCGTGTTGCATGCCCGCGGTCGTCAATCGCCGTTACCAACCAATTTGCTGACCGATCTGATTCAGGTGGGTGGTGAC ACGATTGCCAATTTGCGCCGTGCCCTCTTCAGTTCGCTTGGGGGCGACGATTTGATCGAAGCCGAAATTGGGCGGCGGAT CGATGTGCTGGTGGATGAGGGTGAACTCTCACCGGAGGAAGCTGATCGCTGGCGCAAACTGCTATTGCGGCAGGAGTTTG CGCACGACGCCCGTAACCGGCTGGCCGACCGGATTGCTGATGTTCCCACTCGTAACGATGTCGAACGGCTGCATGCGCAA ATCGATGCGCTGGCCAGTACGGTCGAACAATTATTGCGGCGGCGCTAA
Upstream 100 bases:
>100_bases ATTGCCGCTGAGACTATCAGGTTCGTCTGGAGTAATGGATAGTGTAGCCGGAACGCTCTCAGTTTCACACCAGCAACGTC TGGCACAAGGCGGCAATTCT
Downstream 100 bases:
>100_bases AGGGTTCATTTTGGTATTAAACGCAATTGTATAGCGGTTCGGCTGGTTTACGTGGTGCAATGACAGATAGGGCCAGACAG GTTACAACGAGCCTGATGTA
Product: PHA accumulation regulator DNA-binding protein
Products: NA
Alternate protein names: Polyhydroxyalkanoate Synthesis Repressor PhaR; Transcriptional Regulator; Polyhydroxyalkanoate Synthesis Repressor; Polyhydroxyalkonate Synthesis Repressor Phar; Regulator For Granula-Associated Protein; Regulator For Granule-Associated Proteins; Methyl-Accepting Chemotaxis Protein; Polyhydroxyalkanoate Synthesis Regulators; Polyhydroxyalkanoate Synthesis Repressor PhaR-Like
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MHLIKKYANRKLYHTNQKRYITLDGIARLVQEGETVQVLDNETGDDITANILAQVVLHARGRQSPLPTNLLTDLIQVGGD TIANLRRALFSSLGGDDLIEAEIGRRIDVLVDEGELSPEEADRWRKLLLRQEFAHDARNRLADRIADVPTRNDVERLHAQ IDALASTVEQLLRRR
Sequences:
>Translated_175_residues MHLIKKYANRKLYHTNQKRYITLDGIARLVQEGETVQVLDNETGDDITANILAQVVLHARGRQSPLPTNLLTDLIQVGGD TIANLRRALFSSLGGDDLIEAEIGRRIDVLVDEGELSPEEADRWRKLLLRQEFAHDARNRLADRIADVPTRNDVERLHAQ IDALASTVEQLLRRR >Mature_175_residues MHLIKKYANRKLYHTNQKRYITLDGIARLVQEGETVQVLDNETGDDITANILAQVVLHARGRQSPLPTNLLTDLIQVGGD TIANLRRALFSSLGGDDLIEAEIGRRIDVLVDEGELSPEEADRWRKLLLRQEFAHDARNRLADRIADVPTRNDVERLHAQ IDALASTVEQLLRRR
Specific function: Unknown
COG id: COG5394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19847; Mature: 19847
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLIKKYANRKLYHTNQKRYITLDGIARLVQEGETVQVLDNETGDDITANILAQVVLHAR CCHHHHHHCCCCEECCCCCEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHC GRQSPLPTNLLTDLIQVGGDTIANLRRALFSSLGGDDLIEAEIGRRIDVLVDEGELSPEE CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCHHH ADRWRKLLLRQEFAHDARNRLADRIADVPTRNDVERLHAQIDALASTVEQLLRRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHLIKKYANRKLYHTNQKRYITLDGIARLVQEGETVQVLDNETGDDITANILAQVVLHAR CCHHHHHHCCCCEECCCCCEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHC GRQSPLPTNLLTDLIQVGGDTIANLRRALFSSLGGDDLIEAEIGRRIDVLVDEGELSPEE CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCCCHHH ADRWRKLLLRQEFAHDARNRLADRIADVPTRNDVERLHAQIDALASTVEQLLRRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA