| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526736
Identifier: 222526736
GI number: 222526736
Start: 4368622
End: 4369263
Strand: Reverse
Name: 222526736
Synonym: Chy400_3510
Alternate gene names: NA
Gene position: 4369263-4368622 (Counterclockwise)
Preceding gene: 222526737
Following gene: 222526735
Centisome position: 82.92
GC content: 54.36
Gene sequence:
>642_bases ATGATGCCACCGAATGATCTAACTGCCGAAGCACTGAGTCGAGGGGCATTACCGGGTCGCGGATATGCAATTGCCCGTCG TATTTCACAGATACTGCATCCGGTACCGCTTGGCATCGTCAGCATCTTCATCGTCGGCGTGCTCGGTAGTGAAAACCGCA CACAGGGATTGTGGTGGGCACTGTTCTGTGCGCTTATCCATGTTGTCCCACCCACGATCTTCTTTAACATTCGCCTCCAC CAGGGCGCATACAGTGATGACGACATCTCTATCCGAAGTCAGCGCAATGAGCTTTACCTGTTTGGGATGCTGAATGTCAC CATTGGCACACTGCTACTCTGGCTGCTCAATGCGCCATTGCCACTACTCGCCATGCTGGTGTCGGTGGCGGTCATGAACC TGATCTCATTTTTCATCAACCTGTTCTGGAAAATCAGCATTCATTCCGCCAGTATTGGCTCATGCGCAACCCTGGCCAGC ATCTATCTACCCGCGCTGGGTGGCATCTGCTGGATCGCCGCCGTCGTGTTGGGGTGGGCACGTCTGCGCACCCGTAATCA CACCCTGATGCAGGTCATTGCCGGGATAAGCCTGGCGGTATTGTGTGTGCTGGGAGTGTATCGGTTGTTTGGGTTGATCT AG
Upstream 100 bases:
>100_bases AGCAGGCAGCCGCATTTCGCTGGGAACGGGCCGGTCAGGAGCTTGTCGCTATGTATCGTGAGCTTGTAGCTACAACTACG GCTCGCTGAGGGTTGTGAAG
Downstream 100 bases:
>100_bases GAATTTTGACCAGTTCCCAGTAATAGAAGCCTTATCTCTCTTCCATTTACGAGCATCAAGATGCTTCTGAAATTACTACA CTACCTTCGATGTCCGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MMPPNDLTAEALSRGALPGRGYAIARRISQILHPVPLGIVSIFIVGVLGSENRTQGLWWALFCALIHVVPPTIFFNIRLH QGAYSDDDISIRSQRNELYLFGMLNVTIGTLLLWLLNAPLPLLAMLVSVAVMNLISFFINLFWKISIHSASIGSCATLAS IYLPALGGICWIAAVVLGWARLRTRNHTLMQVIAGISLAVLCVLGVYRLFGLI
Sequences:
>Translated_213_residues MMPPNDLTAEALSRGALPGRGYAIARRISQILHPVPLGIVSIFIVGVLGSENRTQGLWWALFCALIHVVPPTIFFNIRLH QGAYSDDDISIRSQRNELYLFGMLNVTIGTLLLWLLNAPLPLLAMLVSVAVMNLISFFINLFWKISIHSASIGSCATLAS IYLPALGGICWIAAVVLGWARLRTRNHTLMQVIAGISLAVLCVLGVYRLFGLI >Mature_213_residues MMPPNDLTAEALSRGALPGRGYAIARRISQILHPVPLGIVSIFIVGVLGSENRTQGLWWALFCALIHVVPPTIFFNIRLH QGAYSDDDISIRSQRNELYLFGMLNVTIGTLLLWLLNAPLPLLAMLVSVAVMNLISFFINLFWKISIHSASIGSCATLAS IYLPALGGICWIAAVVLGWARLRTRNHTLMQVIAGISLAVLCVLGVYRLFGLI
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23306; Mature: 23306
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPPNDLTAEALSRGALPGRGYAIARRISQILHPVPLGIVSIFIVGVLGSENRTQGLWWA CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH LFCALIHVVPPTIFFNIRLHQGAYSDDDISIRSQRNELYLFGMLNVTIGTLLLWLLNAPL HHHHHHHHHCCHHEEEEEEECCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHHHHHCCCH PLLAMLVSVAVMNLISFFINLFWKISIHSASIGSCATLASIYLPALGGICWIAAVVLGWA HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRTRNHTLMQVIAGISLAVLCVLGVYRLFGLI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMPPNDLTAEALSRGALPGRGYAIARRISQILHPVPLGIVSIFIVGVLGSENRTQGLWWA CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH LFCALIHVVPPTIFFNIRLHQGAYSDDDISIRSQRNELYLFGMLNVTIGTLLLWLLNAPL HHHHHHHHHCCHHEEEEEEECCCCCCCCCCEECCCCCEEEEHHHHHHHHHHHHHHHCCCH PLLAMLVSVAVMNLISFFINLFWKISIHSASIGSCATLASIYLPALGGICWIAAVVLGWA HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLRTRNHTLMQVIAGISLAVLCVLGVYRLFGLI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA