| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526727
Identifier: 222526727
GI number: 222526727
Start: 4358725
End: 4359141
Strand: Direct
Name: 222526727
Synonym: Chy400_3501
Alternate gene names: NA
Gene position: 4358725-4359141 (Clockwise)
Preceding gene: 222526724
Following gene: 222526728
Centisome position: 82.72
GC content: 55.4
Gene sequence:
>417_bases ATGTTTGGTACAAACCGCAAACCCGCCCAGCCGCCGACAGTTGTGAATGGACGGCCAGAGACGGTGATCGGTGCCAACAC ACGTTTCGTCGGCACCTTGAATGCCGAGGGAAATGTTCGCATCGATGGCGCTGTGGAAGGCGATATTGAGGTGGTTGGTA ATCTGATCATCGGTGAGACGGGGCGGGTGATTGCGACCATAAAAGCGCGTAATGTTCACGTGTCAGGTGCAGTGAAGGGG CAGATTACTGCTCTTGAGCAGTTGGAAATCTCACCCACGGGTAAAGTATGGGGTGATATTACCACGGCTGCGCTGCATAT CGAACCGGGTGGTCTCTTCCGTGGCCAAAGCTCGATGACCACCAACATTGACGAACCGCTGCTGCTTGAACCACCGCGCT CGACTACCGAGTCGTGA
Upstream 100 bases:
>100_bases ATGACGGCAACGATTTCCCGGTTTATCGGGGTGTCTTCCGGCCTCGCCCGCATATAGTGATACAGACAGGTGGCCGGTTA TGTGGAGGAGGATCGCACGC
Downstream 100 bases:
>100_bases TCGCTTTGATTATAAGTACTGCTAGCTTGCACAGCAGGTTTTGTGCTCTGTCGTGCAAGCGTATACCCTTATGCGCCGTT ATCGCTCATCGCCAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MFGTNRKPAQPPTVVNGRPETVIGANTRFVGTLNAEGNVRIDGAVEGDIEVVGNLIIGETGRVIATIKARNVHVSGAVKG QITALEQLEISPTGKVWGDITTAALHIEPGGLFRGQSSMTTNIDEPLLLEPPRSTTES
Sequences:
>Translated_138_residues MFGTNRKPAQPPTVVNGRPETVIGANTRFVGTLNAEGNVRIDGAVEGDIEVVGNLIIGETGRVIATIKARNVHVSGAVKG QITALEQLEISPTGKVWGDITTAALHIEPGGLFRGQSSMTTNIDEPLLLEPPRSTTES >Mature_138_residues MFGTNRKPAQPPTVVNGRPETVIGANTRFVGTLNAEGNVRIDGAVEGDIEVVGNLIIGETGRVIATIKARNVHVSGAVKG QITALEQLEISPTGKVWGDITTAALHIEPGGLFRGQSSMTTNIDEPLLLEPPRSTTES
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14510; Mature: 14510
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGTNRKPAQPPTVVNGRPETVIGANTRFVGTLNAEGNVRIDGAVEGDIEVVGNLIIGET CCCCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCEEECCEECCCEEEEEEEEECCC GRVIATIKARNVHVSGAVKGQITALEQLEISPTGKVWGDITTAALHIEPGGLFRGQSSMT CCEEEEEEECEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCEEECCCCCC TNIDEPLLLEPPRSTTES CCCCCCEEECCCCCCCCC >Mature Secondary Structure MFGTNRKPAQPPTVVNGRPETVIGANTRFVGTLNAEGNVRIDGAVEGDIEVVGNLIIGET CCCCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCEEECCEECCCEEEEEEEEECCC GRVIATIKARNVHVSGAVKGQITALEQLEISPTGKVWGDITTAALHIEPGGLFRGQSSMT CCEEEEEEECEEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCEEECCCCCC TNIDEPLLLEPPRSTTES CCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA