| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526699
Identifier: 222526699
GI number: 222526699
Start: 4324395
End: 4325417
Strand: Reverse
Name: 222526699
Synonym: Chy400_3470
Alternate gene names: NA
Gene position: 4325417-4324395 (Counterclockwise)
Preceding gene: 222526700
Following gene: 222526698
Centisome position: 82.09
GC content: 62.37
Gene sequence:
>1023_bases ATGCTTACCCACGCGAGCTACGTTCACGCTCAACGACGAAACGCCACCCAGGGCGGAGATATCTCCCTACGACGCGCCGG GCAATCTGATGAGCAAAACTGGGGTGGGAGCAGACACCCACGGCGCCAACGGAAACGACGGAGGCACGTCCCAGACCATC CTCCTGAGGCGCGGTGCGCAGCGGGGGTATCGGTCAGACTGCGTTCACCTGCGTTCACCGACACCGGACAGCACCTGGAT GCCAGGGGGTTGCTGGAGTATCATGCCCGGTACGATGATCCGGCTAGCGGGCAGTTCATTACGCCGGACAGCAGCGTCGT CGGCGCGGGGCCGCTCACCGTCTGGCCGAGCGATGCAACGGCGCAGGGGATGGGGCGCAGCGCCGGCAGCGGCCCGGTCA ACCCGCAGGACCTGAACCGCTCCGCCGATGCGCTGAACCATCCACTGACATACACCGACCCGACGGGGCATTGGGTTGAG ACGGCGTGGGACCTTGCCAATCTGGTCCTGAGCGCCGCTGCCGTCTGGCAACATCCCAGCGACCCCTGGAATTGGGCCGC GCTCGCTGCCGACACCGCATCCACCGTGCTGCCCGTCGTTCCTGGCGGCGGAGGGGCACTGATCCGCGCCGCAGCCCACG CCGATGAGGCGGCGGGGGCGGCGCAGGCGGCGGCGCGGGGTGGGGGGGTAGTTGCAGCGGCTGTACCGCAAGCCGGGCAA CTGCACAAGAATGCCAACGATGTCACAAAGCGGCCAAGTGGCTTCAGAAAGGGAGTACGTGAAGCAGTTGAATCCAAAGC TACGCGAAATGAGGAAGGTGAAATGATCTGTCCGACTTGCGGACGAACAATGACGAAACCAGATCTGGACCACACCCCAC CTTGGAGAGATAGAGTTGCAAGAATGTTCGGTTGGACACGTAAGCAGGTGCTAGATGAATACAATGACGTCACAAAATTG AGGGCTCAATGTCCATCCTGCAATCGCAGTAGGAAGTTTGAACAAGGAGCATCGTATGAATGA
Upstream 100 bases:
>100_bases TGGAGCGTGCGCCTGGGCGCACGTGCGCCACGCCTAGGGCGGTCGCCGCTGCGCCCACGTCCGAGGCGAGAGTGGGAGCA GTGCCCTGGCGATACAGGCA
Downstream 100 bases:
>100_bases GAAGTCATTGGGCTTATGCTATTTTGACCATTTCGTTCTTCACCTGGGTGCAAATCCCATCGATCACCATGTATTTTGTC CGGAAGATGAGAAGGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Filamentous Hemagglutinin Family Outer Membrane Protein; YD Repeat-/RHS Repeat-Containing Protein; Filamentous Haemagglutinin Outer Membrane Protein
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCAAGVSVRLRSPAFTDTGQHLD ARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDATAQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVE TAWDLANLVLSAAAVWQHPSDPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVARMFGWTRKQVLDEYNDVTKL RAQCPSCNRSRKFEQGASYE
Sequences:
>Translated_340_residues MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCAAGVSVRLRSPAFTDTGQHLD ARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDATAQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVE TAWDLANLVLSAAAVWQHPSDPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVARMFGWTRKQVLDEYNDVTKL RAQCPSCNRSRKFEQGASYE >Mature_340_residues MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCAAGVSVRLRSPAFTDTGQHLD ARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDATAQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVE TAWDLANLVLSAAAVWQHPSDPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVARMFGWTRKQVLDEYNDVTKL RAQCPSCNRSRKFEQGASYE
Specific function: Unknown
COG id: COG5529
COG function: function code R; Pyocin large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36675; Mature: 36675
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCA CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH AGVSVRLRSPAFTDTGQHLDARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDAT CCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECCCCEEECCCCCH AQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVETAWDLANLVLSAAAVWQHPS HHHCCCCCCCCCCCHHHHCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC DPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ CCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHH LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVA HHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHH RMFGWTRKQVLDEYNDVTKLRAQCPSCNRSRKFEQGASYE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTHASYVHAQRRNATQGGDISLRRAGQSDEQNWGGSRHPRRQRKRRRHVPDHPPEARCA CCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH AGVSVRLRSPAFTDTGQHLDARGLLEYHARYDDPASGQFITPDSSVVGAGPLTVWPSDAT CCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCEECCCCEEECCCCCH AQGMGRSAGSGPVNPQDLNRSADALNHPLTYTDPTGHWVETAWDLANLVLSAAAVWQHPS HHHCCCCCCCCCCCHHHHCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC DPWNWAALAADTASTVLPVVPGGGGALIRAAAHADEAAGAAQAAARGGGVVAAAVPQAGQ CCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHH LHKNANDVTKRPSGFRKGVREAVESKATRNEEGEMICPTCGRTMTKPDLDHTPPWRDRVA HHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHH RMFGWTRKQVLDEYNDVTKLRAQCPSCNRSRKFEQGASYE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA