Click here to switch to the map view.

The map label for this gene is 222526696

Identifier: 222526696

GI number: 222526696

Start: 4320817

End: 4321482

Strand: Reverse

Name: 222526696

Synonym: Chy400_3466

Alternate gene names: NA

Gene position: 4321482-4320817 (Counterclockwise)

Preceding gene: 222526698

Following gene: 222526695

Centisome position: 82.02

GC content: 58.86

Gene sequence:

>666_bases
TTGAACAATCCGGTCAAGAATACCGACCCGACGGGGCATTGGATCGAGAGCGCGATTGATATCGCCTTCATCGCCTATGA
CCTCTACGACATCTCGCAGAATGGCCTGACGTGGACCAGCGGGCTGGCGCTGGCAGCAGATGTAGCCAGCCTGGCGCTGC
CGATGGTGGCGGGCGGCGGGATGCTGATCCGCGCCGCAGCCCACGCCGACGACGCGGCGGGTGCCCTGCACGCTATGGCC
CGCGCCGATGAGGCGGCGGGGGCGGCGCAGGCGGCGATAAGGGGTGGGGAGGCGGGGGCGGGGCAGATTTCGGAGTCTGC
GCGCGAGGCATCCATAGTCTATCGCGGACTTGCTCAAGGCGAGGATCCAACAAAAGGTATCGTTGCCAGAGCACCGGGTT
TACGCAATGTAGATCCGAAAAGCCACGTCGCAGGACTGCGAGCCAGTCCCTGGATTTCTACCACAAAGGATAAACGCATT
GCCATCGAAAAATATGGCCGATACGGCGTTGTGCAAATCGACCTGACGAAAGTTCGTTCTGAGATCGTCGATATCTCGAA
CGGAATTCCAGGTGTCAAAGGAAGGCTATCCCAGTGGGCTAAGCATGACAAGGAAGTCCTAATCCGTGATTTTATCCCGC
CTGAAGCAATCATACGCATTCAATAG

Upstream 100 bases:

>100_bases
GCTGACGGCCTAGCCGGGCGATGCCACCGCGCGGGCGGCGTGGGCAGCGGAGGGCGGCGGGCCGGCCAACCCGCAGGACC
TGAACCGGTATAGCTACGGA

Downstream 100 bases:

>100_bases
ATCATCCTGGAACTGAGGCATAGAATCACGACGAGGAAGGAAAGAGATTTCTTGGGAAATGAACGTATGATCGCATAGCA
GAGGTGAGGGAATGGATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: YD Repeat-/RHS Repeat-Containing Protein; YD Repeat-Containing Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNNPVKNTDPTGHWIESAIDIAFIAYDLYDISQNGLTWTSGLALAADVASLALPMVAGGGMLIRAAAHADDAAGALHAMA
RADEAAGAAQAAIRGGEAGAGQISESAREASIVYRGLAQGEDPTKGIVARAPGLRNVDPKSHVAGLRASPWISTTKDKRI
AIEKYGRYGVVQIDLTKVRSEIVDISNGIPGVKGRLSQWAKHDKEVLIRDFIPPEAIIRIQ

Sequences:

>Translated_221_residues
MNNPVKNTDPTGHWIESAIDIAFIAYDLYDISQNGLTWTSGLALAADVASLALPMVAGGGMLIRAAAHADDAAGALHAMA
RADEAAGAAQAAIRGGEAGAGQISESAREASIVYRGLAQGEDPTKGIVARAPGLRNVDPKSHVAGLRASPWISTTKDKRI
AIEKYGRYGVVQIDLTKVRSEIVDISNGIPGVKGRLSQWAKHDKEVLIRDFIPPEAIIRIQ
>Mature_221_residues
MNNPVKNTDPTGHWIESAIDIAFIAYDLYDISQNGLTWTSGLALAADVASLALPMVAGGGMLIRAAAHADDAAGALHAMA
RADEAAGAAQAAIRGGEAGAGQISESAREASIVYRGLAQGEDPTKGIVARAPGLRNVDPKSHVAGLRASPWISTTKDKRI
AIEKYGRYGVVQIDLTKVRSEIVDISNGIPGVKGRLSQWAKHDKEVLIRDFIPPEAIIRIQ

Specific function: Unknown

COG id: COG5529

COG function: function code R; Pyocin large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23311; Mature: 23311

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPVKNTDPTGHWIESAIDIAFIAYDLYDISQNGLTWTSGLALAADVASLALPMVAGGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCC
MLIRAAAHADDAAGALHAMARADEAAGAAQAAIRGGEAGAGQISESAREASIVYRGLAQG
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
EDPTKGIVARAPGLRNVDPKSHVAGLRASPWISTTKDKRIAIEKYGRYGVVQIDLTKVRS
CCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEHHHHHH
EIVDISNGIPGVKGRLSQWAKHDKEVLIRDFIPPEAIIRIQ
HHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MNNPVKNTDPTGHWIESAIDIAFIAYDLYDISQNGLTWTSGLALAADVASLALPMVAGGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHCCCC
MLIRAAAHADDAAGALHAMARADEAAGAAQAAIRGGEAGAGQISESAREASIVYRGLAQG
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
EDPTKGIVARAPGLRNVDPKSHVAGLRASPWISTTKDKRIAIEKYGRYGVVQIDLTKVRS
CCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEHHHHHH
EIVDISNGIPGVKGRLSQWAKHDKEVLIRDFIPPEAIIRIQ
HHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA