| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526619
Identifier: 222526619
GI number: 222526619
Start: 4217982
End: 4218536
Strand: Direct
Name: 222526619
Synonym: Chy400_3387
Alternate gene names: NA
Gene position: 4217982-4218536 (Clockwise)
Preceding gene: 222526617
Following gene: 222526624
Centisome position: 80.05
GC content: 54.77
Gene sequence:
>555_bases ATGCAAGCCGTGAAGTCGATGTTTCAGACGGAAACTTTCGGGGCAGGAATCAGGGGCCGCCCCAGCGCCCCCTCACCCTC TTTTCCTATTTTCTCCTCTCCTAATCTCCTGTCTTCTATCTTCTCCTCTCCTAATCTCCTATCTTCTATCTTCTCCTCTT CTAATCTCCTATCTTCTATCTTCTATCTCCTCCTCCGTGCCCCCGCGTCTCTGTGGTGCAACAAAAAAACAAGCGCACAG AAGGAAGGGGCCGCCCCAGCGCCCCCTTACCCTCTTTTCCTATCTCCTATCTCCTCCTCCGTGCCCTCCGTGTCTCTGTG GTGCAACAAAAAACTAGAACCTGTTTCAAAAAACATCTCCTATGAGGGTATCTCATTCGTTGCCGACCGGTTCCATGATC ATAACGAGCACATCCGGCATTCGCGTGACCAGCCGGGTCAACGACCTGACACGTGCCAGATCGTGCGTACGGCTGGCGCG GCAGCATGGCTGCCGCACGCCAAACGTCGCGACACGCGGATGATGAGCGAGCAAGGCAACCAATCCAGCGCGTGA
Upstream 100 bases:
>100_bases ATAAGAGGGTTGGTTGGCCGGCGGTATCCGACGTAGCGCAACGGAAATTGGTGAATAGTCCAATATTGCCCTATTAAATA GTACCTTGAAATTGTGCGTG
Downstream 100 bases:
>100_bases TGGCACCGGAGATGGTTATTAGAGCGCGATAGTACAGCGTTTTATGAAATAAGTTCTAGCGCACAAAATGAGGGAGCTAT CCCAGCGCCCCCTCACCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MQAVKSMFQTETFGAGIRGRPSAPSPSFPIFSSPNLLSSIFSSPNLLSSIFSSSNLLSSIFYLLLRAPASLWCNKKTSAQ KEGAAPAPPYPLFLSPISSSVPSVSLWCNKKLEPVSKNISYEGISFVADRFHDHNEHIRHSRDQPGQRPDTCQIVRTAGA AAWLPHAKRRDTRMMSEQGNQSSA
Sequences:
>Translated_184_residues MQAVKSMFQTETFGAGIRGRPSAPSPSFPIFSSPNLLSSIFSSPNLLSSIFSSSNLLSSIFYLLLRAPASLWCNKKTSAQ KEGAAPAPPYPLFLSPISSSVPSVSLWCNKKLEPVSKNISYEGISFVADRFHDHNEHIRHSRDQPGQRPDTCQIVRTAGA AAWLPHAKRRDTRMMSEQGNQSSA >Mature_184_residues MQAVKSMFQTETFGAGIRGRPSAPSPSFPIFSSPNLLSSIFSSPNLLSSIFSSSNLLSSIFYLLLRAPASLWCNKKTSAQ KEGAAPAPPYPLFLSPISSSVPSVSLWCNKKLEPVSKNISYEGISFVADRFHDHNEHIRHSRDQPGQRPDTCQIVRTAGA AAWLPHAKRRDTRMMSEQGNQSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20151; Mature: 20151
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAVKSMFQTETFGAGIRGRPSAPSPSFPIFSSPNLLSSIFSSPNLLSSIFSSSNLLSSI CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHH FYLLLRAPASLWCNKKTSAQKEGAAPAPPYPLFLSPISSSVPSVSLWCNKKLEPVSKNIS HHHHHHCCHHHHCCCCCCCHHCCCCCCCCCCEEECCHHCCCCCEEEHHCCCCCHHHHCCC YEGISFVADRFHDHNEHIRHSRDQPGQRPDTCQIVRTAGAAAWLPHAKRRDTRMMSEQGN CCHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCC QSSA CCCC >Mature Secondary Structure MQAVKSMFQTETFGAGIRGRPSAPSPSFPIFSSPNLLSSIFSSPNLLSSIFSSSNLLSSI CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHH FYLLLRAPASLWCNKKTSAQKEGAAPAPPYPLFLSPISSSVPSVSLWCNKKLEPVSKNIS HHHHHHCCHHHHCCCCCCCHHCCCCCCCCCCEEECCHHCCCCCEEEHHCCCCCHHHHCCC YEGISFVADRFHDHNEHIRHSRDQPGQRPDTCQIVRTAGAAAWLPHAKRRDTRMMSEQGN CCHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHCCC QSSA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA