| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526608
Identifier: 222526608
GI number: 222526608
Start: 4209007
End: 4209921
Strand: Direct
Name: 222526608
Synonym: Chy400_3376
Alternate gene names: NA
Gene position: 4209007-4209921 (Clockwise)
Preceding gene: 222526607
Following gene: 222526609
Centisome position: 79.88
GC content: 55.08
Gene sequence:
>915_bases ATGCGCATTGTCTCGCTGCTACCAGGAACAACCGAAATTGTCTGTGCATTAGGTCTGGCTGACCATCTGGTAGCTGTGAC CCACGAATGTGATTATCCGCCGGAGGTGAAAGGACTACCGGTTGTAACCCGGAGCCTGCTCGACGAAACAGAGACCGCTT CCTCTTCCGAGATAGATACGGCTGTACGTGAACGTGCTCGCAATGAACTATCAATCTACGAGCTTGACATGGAGTTGCTA TCATCGTTACAGCCCGATATTATCTTAACCCAGGCGTTGTGTGATGTCTGTGCTGTACCGCTGCATCAGGTCGAGGCCAG TCTGGCTAACCCGGCGATCCAGGTGCTTTCATTTGAACCGGTTGATCTGGCCGGTATTTTTGGTTCGATCAAAGCGATTG GGCGTGCGTTGGGTGTGGCTGAACGGGCCGAACATCTCGTCAACGAACTCACAGCGCGGGTTGAGCGAGTGAAGACACTG GCAGCGCAGGCAACTTCACGGCCACGGGTGGTTTGTATCGAATGGCTCGATCCGGTTTTCGGTCCTGGCCACTGGGTGCC CGAAATGGTAGCAATTGCAGGTGGTCAGCCACTCCTTGGCACTGCGGGTGGGCATTCGCGACGGATCATCTGGACTGATG TGATAGCGAGTGCGCCTGAAGTATTGATTGTGATGCCGTGTGGATTCACGCTTGAGCGAACGATTGCTGAAGCGCGCGCT ATTCTTCCCCAACGAGCCGGTTGGGATGCGCTACCGGCGGTACGAATGGGAAGAGTCTTTGCGGTAGATGGTAACGCCTA CTTTAGCCGACCCGGGCCGCGGATCGTTGACAGTCTGGAATTATTGGCTTCCATGATCCATCCCGAACTGTTTGCCGGTT GGGGGCCGACAGGAGCGAGTGCTGTTATACAGTGA
Upstream 100 bases:
>100_bases ATTTCCTATTTCCTATCTTCTCTCTTCTGCTCATCCTTGACAGTCATCATATCGGGTGTTACGCTGTAGCAAAGAACAGA CCATGTCAAGCGTGAAGACC
Downstream 100 bases:
>100_bases GTAGTGATCGATCCATCACATATACAAACCACGACGAGAGGGGATTATGGAGTCACCAAACATCACAATTGCGCTAGCCT TGCAAATACTGGCTACAGAA
Product: periplasmic binding protein
Products: NA
Alternate protein names: ABC Fe3+-Hydroxamate Transporter Periplasmic Component; ABC-Type Transport System Periplasmic Component; ABC Transporter; MoxR-Like ATPases-Like; Iron ABC Transporter Periplasmic Protein; Precorrin Methylase; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit; Ferric Ion ABC Transporter
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRIVSLLPGTTEIVCALGLADHLVAVTHECDYPPEVKGLPVVTRSLLDETETASSSEIDTAVRERARNELSIYELDMELL SSLQPDIILTQALCDVCAVPLHQVEASLANPAIQVLSFEPVDLAGIFGSIKAIGRALGVAERAEHLVNELTARVERVKTL AAQATSRPRVVCIEWLDPVFGPGHWVPEMVAIAGGQPLLGTAGGHSRRIIWTDVIASAPEVLIVMPCGFTLERTIAEARA ILPQRAGWDALPAVRMGRVFAVDGNAYFSRPGPRIVDSLELLASMIHPELFAGWGPTGASAVIQ
Sequences:
>Translated_304_residues MRIVSLLPGTTEIVCALGLADHLVAVTHECDYPPEVKGLPVVTRSLLDETETASSSEIDTAVRERARNELSIYELDMELL SSLQPDIILTQALCDVCAVPLHQVEASLANPAIQVLSFEPVDLAGIFGSIKAIGRALGVAERAEHLVNELTARVERVKTL AAQATSRPRVVCIEWLDPVFGPGHWVPEMVAIAGGQPLLGTAGGHSRRIIWTDVIASAPEVLIVMPCGFTLERTIAEARA ILPQRAGWDALPAVRMGRVFAVDGNAYFSRPGPRIVDSLELLASMIHPELFAGWGPTGASAVIQ >Mature_304_residues MRIVSLLPGTTEIVCALGLADHLVAVTHECDYPPEVKGLPVVTRSLLDETETASSSEIDTAVRERARNELSIYELDMELL SSLQPDIILTQALCDVCAVPLHQVEASLANPAIQVLSFEPVDLAGIFGSIKAIGRALGVAERAEHLVNELTARVERVKTL AAQATSRPRVVCIEWLDPVFGPGHWVPEMVAIAGGQPLLGTAGGHSRRIIWTDVIASAPEVLIVMPCGFTLERTIAEARA ILPQRAGWDALPAVRMGRVFAVDGNAYFSRPGPRIVDSLELLASMIHPELFAGWGPTGASAVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32598; Mature: 32598
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVSLLPGTTEIVCALGLADHLVAVTHECDYPPEVKGLPVVTRSLLDETETASSSEIDT CEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH AVRERARNELSIYELDMELLSSLQPDIILTQALCDVCAVPLHQVEASLANPAIQVLSFEP HHHHHHHCCCCHHEECHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCC VDLAGIFGSIKAIGRALGVAERAEHLVNELTARVERVKTLAAQATSRPRVVCIEWLDPVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCC GPGHWVPEMVAIAGGQPLLGTAGGHSRRIIWTDVIASAPEVLIVMPCGFTLERTIAEARA CCCCCHHHHHHHCCCCCCEECCCCCCCEEEEHHHHHCCCCEEEEECCCCHHHHHHHHHHH ILPQRAGWDALPAVRMGRVFAVDGNAYFSRPGPRIVDSLELLASMIHPELFAGWGPTGAS HCCCCCCCCCCCHHHHCEEEEECCCEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCH AVIQ HHCC >Mature Secondary Structure MRIVSLLPGTTEIVCALGLADHLVAVTHECDYPPEVKGLPVVTRSLLDETETASSSEIDT CEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH AVRERARNELSIYELDMELLSSLQPDIILTQALCDVCAVPLHQVEASLANPAIQVLSFEP HHHHHHHCCCCHHEECHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCC VDLAGIFGSIKAIGRALGVAERAEHLVNELTARVERVKTLAAQATSRPRVVCIEWLDPVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCC GPGHWVPEMVAIAGGQPLLGTAGGHSRRIIWTDVIASAPEVLIVMPCGFTLERTIAEARA CCCCCHHHHHHHCCCCCCEECCCCCCCEEEEHHHHHCCCCEEEEECCCCHHHHHHHHHHH ILPQRAGWDALPAVRMGRVFAVDGNAYFSRPGPRIVDSLELLASMIHPELFAGWGPTGAS HCCCCCCCCCCCHHHHCEEEEECCCEEECCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCH AVIQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA