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The map label for this gene is comEA [H]

Identifier: 222526606

GI number: 222526606

Start: 4206213

End: 4206920

Strand: Direct

Name: comEA [H]

Synonym: Chy400_3374

Alternate gene names: 222526606

Gene position: 4206213-4206920 (Clockwise)

Preceding gene: 222526604

Following gene: 222526607

Centisome position: 79.83

GC content: 54.66

Gene sequence:

>708_bases
ATGTTAACGTTCTATTGGAAATCTCAGAATTGTGCGTTACTTTTGCCCCTGATTCACGGTTTCATATATGACGACATGTA
CAGAGCAAAGGGGGCAACCGTGGACGATCAATATATTCCTGCGTTACCCTGGTATCGCCGACCGCAACGGTTGATCGCGA
TTGTATGTGCGGTCATTGGGGGACTGTTAATTGCCTTTGGCCCAGAGATGCGGTTCATCATCGCGTCTGACGAAGCACCT
GCTGTCCTCGATGATCAGATGCTGAAGCTGCCAACCCCTACCGTCGCCTTGGCAGTCGTCTACGTTTCAGGGGCAGTCGC
CGCGCCGGATGTCTATCGGCTACCGCTCAATGCACGGGTGATTGACGTACTGCAAGCAGCGGGTGGTCTGACCGATCAGG
CAGACATCAGCGGCCTCAATTTAGCTGCTCTCGTTCGTGACGGCGAGCATATCCGGGTGCCGTTTGCGGGTGAAGCTGTT
GCGTTACTGGTAGCCGATGTGCAACAGACAGGATTGCTTGATCTTAATCGTGCAAGTGCTGCCGATCTCGAAGAGCTACC
TGGCGTTGGGGCAACACTGGCTGCCCGCATTATTGAACGGCGTGAAACGCAAGGCCCTTACCGTAGTGTGGAAGAACTGC
GGGAAGTGAGCGGGATCGGTGAGAAACTCTTTGCCCAGATTGCGCCGCTTGTCACAATCGGCCCGTAG

Upstream 100 bases:

>100_bases
TTTGCGTAAAACGATTTGTATTGAAGGACATACGTCCACCTCCTTAACAGTTTGTGCTGATGTTACTGTAGCATTGCGGT
ATCTGTCGTGCGATAGTGCA

Downstream 100 bases:

>100_bases
GCAACTATTTCGTTTACAACCTTGCACAAAATAGCATAGTAGCATATACTCGCAGTGGCACACAGGTGATGGGCAGGAAT
GCCGGGCATACCCTCTGCCG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MLTFYWKSQNCALLLPLIHGFIYDDMYRAKGATVDDQYIPALPWYRRPQRLIAIVCAVIGGLLIAFGPEMRFIIASDEAP
AVLDDQMLKLPTPTVALAVVYVSGAVAAPDVYRLPLNARVIDVLQAAGGLTDQADISGLNLAALVRDGEHIRVPFAGEAV
ALLVADVQQTGLLDLNRASAADLEELPGVGATLAARIIERRETQGPYRSVEELREVSGIGEKLFAQIAPLVTIGP

Sequences:

>Translated_235_residues
MLTFYWKSQNCALLLPLIHGFIYDDMYRAKGATVDDQYIPALPWYRRPQRLIAIVCAVIGGLLIAFGPEMRFIIASDEAP
AVLDDQMLKLPTPTVALAVVYVSGAVAAPDVYRLPLNARVIDVLQAAGGLTDQADISGLNLAALVRDGEHIRVPFAGEAV
ALLVADVQQTGLLDLNRASAADLEELPGVGATLAARIIERRETQGPYRSVEELREVSGIGEKLFAQIAPLVTIGP
>Mature_235_residues
MLTFYWKSQNCALLLPLIHGFIYDDMYRAKGATVDDQYIPALPWYRRPQRLIAIVCAVIGGLLIAFGPEMRFIIASDEAP
AVLDDQMLKLPTPTVALAVVYVSGAVAAPDVYRLPLNARVIDVLQAAGGLTDQADISGLNLAALVRDGEHIRVPFAGEAV
ALLVADVQQTGLLDLNRASAADLEELPGVGATLAARIIERRETQGPYRSVEELREVSGIGEKLFAQIAPLVTIGP

Specific function: Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect [H]

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HhH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004787
- InterPro:   IPR004509
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR019554 [H]

Pfam domain/function: PF00633 HHH; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 25316; Mature: 25316

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFYWKSQNCALLLPLIHGFIYDDMYRAKGATVDDQYIPALPWYRRPQRLIAIVCAVIG
CEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GLLIAFGPEMRFIIASDEAPAVLDDQMLKLPTPTVALAVVYVSGAVAAPDVYRLPLNARV
HHHHHCCCCEEEEEECCCCCCHHCCHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHH
IDVLQAAGGLTDQADISGLNLAALVRDGEHIRVPFAGEAVALLVADVQQTGLLDLNRASA
HHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCEECCCCCC
ADLEELPGVGATLAARIIERRETQGPYRSVEELREVSGIGEKLFAQIAPLVTIGP
CCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCEEEECC
>Mature Secondary Structure
MLTFYWKSQNCALLLPLIHGFIYDDMYRAKGATVDDQYIPALPWYRRPQRLIAIVCAVIG
CEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GLLIAFGPEMRFIIASDEAPAVLDDQMLKLPTPTVALAVVYVSGAVAAPDVYRLPLNARV
HHHHHCCCCEEEEEECCCCCCHHCCHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHH
IDVLQAAGGLTDQADISGLNLAALVRDGEHIRVPFAGEAVALLVADVQQTGLLDLNRASA
HHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCEECCCCCC
ADLEELPGVGATLAARIIERRETQGPYRSVEELREVSGIGEKLFAQIAPLVTIGP
CCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7968523; 8969508; 9384377; 7768800 [H]