| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is aroK [H]
Identifier: 222526604
GI number: 222526604
Start: 4202436
End: 4202969
Strand: Direct
Name: aroK [H]
Synonym: Chy400_3372
Alternate gene names: 222526604
Gene position: 4202436-4202969 (Clockwise)
Preceding gene: 222526603
Following gene: 222526606
Centisome position: 79.76
GC content: 61.24
Gene sequence:
>534_bases ATGGTGTGGGATCCAAACTGGCTGGATCGGCCTGTAGCACTGGTTGGTTTAAGTGGATGTGGCAAGTCAACCCTGGCCCG GTTGCTGGCACGCGCCCTGAGCTGGCCCTGGTACGATACCGACGCGGCGATTGCCGCCGCCGCCGGTATGAGTGTGGCCG ATCTGTTTCAGACCTATGGCGAGGCCGAGTTTCGCGTGCGCGAGACAGCCGCGCTGACCGAAGCACTGCGTGAAGCGCAG GTGATTGCTACCGGCGGTGGCATTGTCTTGCAGCCGGAAAACCGACGTATGCTGCGCGAATATGCGACGGTGATCTGGCT GGATGCTGCTGATGCGACGATCCTGACCCGGCTGGCTGCCGATGCCGAACAACGCCCATTGTTGCACGGCGATGCCGCAG CGCGACTGGCCGAATTACGTGCGCGACGTACACCGTTGTATGCTGAAGTGGCTGATGTAATCATCGCCACCGATGGCAAA ACACCGCTTGAACTGGTGCAGCAGGTGATAGCGGCGCTTCGTCAGGGGCGATAG
Upstream 100 bases:
>100_bases GATTATCGCGGCAGCAGTTGCATATGCTTTATCGGCTTTTGTGATCTGGAGCCTGCGCCTGCAACGGATCGCAGCGCAGC CCACTGCATAGGAGCAGGTT
Downstream 100 bases:
>100_bases AGCAGGTCAACAAGTTGACATAATAATATCCAGGACAGACAACCCCGGTTGTCTGCCCTGGATGCAGATTCATTAGCGTT CTTTTCAACCGCGATAGTTG
Product: Shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MVWDPNWLDRPVALVGLSGCGKSTLARLLARALSWPWYDTDAAIAAAAGMSVADLFQTYGEAEFRVRETAALTEALREAQ VIATGGGIVLQPENRRMLREYATVIWLDAADATILTRLAADAEQRPLLHGDAAARLAELRARRTPLYAEVADVIIATDGK TPLELVQQVIAALRQGR
Sequences:
>Translated_177_residues MVWDPNWLDRPVALVGLSGCGKSTLARLLARALSWPWYDTDAAIAAAAGMSVADLFQTYGEAEFRVRETAALTEALREAQ VIATGGGIVLQPENRRMLREYATVIWLDAADATILTRLAADAEQRPLLHGDAAARLAELRARRTPLYAEVADVIIATDGK TPLELVQQVIAALRQGR >Mature_177_residues MVWDPNWLDRPVALVGLSGCGKSTLARLLARALSWPWYDTDAAIAAAAGMSVADLFQTYGEAEFRVRETAALTEALREAQ VIATGGGIVLQPENRRMLREYATVIWLDAADATILTRLAADAEQRPLLHGDAAARLAELRARRTPLYAEVADVIIATDGK TPLELVQQVIAALRQGR
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=168, Percent_Identity=39.8809523809524, Blast_Score=100, Evalue=4e-23, Organism=Escherichia coli, GI1786587, Length=171, Percent_Identity=35.672514619883, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19236; Mature: 19236
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWDPNWLDRPVALVGLSGCGKSTLARLLARALSWPWYDTDAAIAAAAGMSVADLFQTYG CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHC EAEFRVRETAALTEALREAQVIATGGGIVLQPENRRMLREYATVIWLDAADATILTRLAA CCHHHHHHHHHHHHHHHHHHEEEECCCEEECCCCHHHHHHHHHEEEECCCCHHHHHHHHH DAEQRPLLHGDAAARLAELRARRTPLYAEVADVIIATDGKTPLELVQQVIAALRQGR CHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVWDPNWLDRPVALVGLSGCGKSTLARLLARALSWPWYDTDAAIAAAAGMSVADLFQTYG CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHC EAEFRVRETAALTEALREAQVIATGGGIVLQPENRRMLREYATVIWLDAADATILTRLAA CCHHHHHHHHHHHHHHHHHHEEEECCCEEECCCCHHHHHHHHHEEEECCCCHHHHHHHHH DAEQRPLLHGDAAARLAELRARRTPLYAEVADVIIATDGKTPLELVQQVIAALRQGR CHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12663927 [H]