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The map label for this gene is yohJ [C]

Identifier: 222526585

GI number: 222526585

Start: 4176196

End: 4176537

Strand: Reverse

Name: yohJ [C]

Synonym: Chy400_3353

Alternate gene names: 222526585

Gene position: 4176537-4176196 (Counterclockwise)

Preceding gene: 222526592

Following gene: 222526584

Centisome position: 79.27

GC content: 54.39

Gene sequence:

>342_bases
GTGGTTGATGCCATTTTGGGACTGTTGCTTTGCCAGCTTATCGGCGAAATCGTGAGTCGCGCGCTTAATTTACCGGTTCC
CGGCCCAGTTGTCGGTATGCTCCTCTTATTCACCGTATTACGCTGGCAAGGCAAGGTGCCAGCACCGCTTGAAACAACTG
CTCATAACATCCTGGCCCATCTGCCGCTACTGTTTGTCCCTGCCGGTGTAGGCGTGATCGTCCATCTGCCATTACTCAGT
CGCGAGGGGGCGCCACTGCTGGCAGCGATTGTTGTCTCAACGATGGTAACGCTGTTAGTAACCGGTTTGACCATTCGCCT
TCTGCGCAATCGAAAGGGTTAG

Upstream 100 bases:

>100_bases
GACGCCAGTATGGGTGCGTCCTCTGCCTTCTATTATAGTAGGGATCGCAAACGAAGTGGTCAGGGTTTGCGATTGTTGTC
GTAGAAGGGAGGTATCCGTC

Downstream 100 bases:

>100_bases
ACCATCATGGATGAACGAATCTTTTCAATCTGGGTCTACCTCGCTCAAACCCCATTGCTCTGGCTAACGGCAACGATTGC
CGTCTATCGCCTGATGACAG

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MVDAILGLLLCQLIGEIVSRALNLPVPGPVVGMLLLFTVLRWQGKVPAPLETTAHNILAHLPLLFVPAGVGVIVHLPLLS
REGAPLLAAIVVSTMVTLLVTGLTIRLLRNRKG

Sequences:

>Translated_113_residues
MVDAILGLLLCQLIGEIVSRALNLPVPGPVVGMLLLFTVLRWQGKVPAPLETTAHNILAHLPLLFVPAGVGVIVHLPLLS
REGAPLLAAIVVSTMVTLLVTGLTIRLLRNRKG
>Mature_113_residues
MVDAILGLLLCQLIGEIVSRALNLPVPGPVVGMLLLFTVLRWQGKVPAPLETTAHNILAHLPLLFVPAGVGVIVHLPLLS
REGAPLLAAIVVSTMVTLLVTGLTIRLLRNRKG

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 11976; Mature: 11976

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDAILGLLLCQLIGEIVSRALNLPVPGPVVGMLLLFTVLRWQGKVPAPLETTAHNILAH
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LPLLFVPAGVGVIVHLPLLSREGAPLLAAIVVSTMVTLLVTGLTIRLLRNRKG
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVDAILGLLLCQLIGEIVSRALNLPVPGPVVGMLLLFTVLRWQGKVPAPLETTAHNILAH
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LPLLFVPAGVGVIVHLPLLSREGAPLLAAIVVSTMVTLLVTGLTIRLLRNRKG
HHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA