Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526565
Identifier: 222526565
GI number: 222526565
Start: 4155858
End: 4156637
Strand: Direct
Name: 222526565
Synonym: Chy400_3333
Alternate gene names: NA
Gene position: 4155858-4156637 (Clockwise)
Preceding gene: 222526564
Following gene: 222526566
Centisome position: 78.87
GC content: 59.23
Gene sequence:
>780_bases ATGCCGCACCATCCCTTGCTTTCGATTGCCATCATTGCCCGTGATGAAGAGCGTCATCTTGCCGGTTGTCTGCGCAGCAT CGCCGGCCTGAGCGATGATGTGGTCGTTATCGTGGATGCCCAGACTCGTGACGCTACCGCAGCGATTGCTACAGATCACG GTTGCCGGGTGTTGATTGAGCCGTGGCGTGGCTTTAGTGCCCAACGAAACCTCGCGCTGCGCCGGTGTCGAGGCGATTGG GTACTCTTCATTGATGCAGATGAGCGCCTGACGCCGGAACTATTCATCGAACTTGCCACATGGAAGCAGACAACCCCTCC GCCCGACCTTGCCGGCTACCGGATTCCCCGCTACAACCTGTTTTTTGGTCGGCGTCTGCGTGGTGGTGGCTGGTACCCGG ATTTTCAGCTTCGCCTGCTGCGGCGCAATGCGGCTCATTACGATGAGCAGGTCGCAGTACACGAAGTGGCAACGCTGAAT GGCACCGTCGGGACACTGCGCGGGCATCTGCTCCATCTCAACATCGAACGGCTTGATGAATTGTGGCAAAAACAGGCCCG CTACGCGCTCGCCGAGGCAATGACGCTGTATCGGCATGGTAGACGGATGCGGCTGCGTAATCTGATCGGTGCGCCGGCGC GTGAGTTTTGGCGCCGCTACGTTCAGCTCGGCGGTTGGCGGGATGCCTGGCTGGGGCTGTTTCTCTGCGCCACTCTGGCC TGGCACGAAGTGGTGAAGTTTTGTATGCTGTACGGATTACGGCATATGTCACGACCGTGA
Upstream 100 bases:
>100_bases CAACCCGGCGGGCTTACGAACATCTTGGCCTGCCCTACCCCGAACGCACCCTACCGGCTGATGACGAGAGTGGACCGCAA CAGGCAACACTATTTTAACT
Downstream 100 bases:
>100_bases CCTTGGACTCACTGCCTAACAATTCCAGCACACCACCTGTCGCCATTTCTCGCTCTTCTTAAAACAACTTTTACCCCGTG AAGGTGACTTGTGGTATGAT
Product: glycosyl transferase family 2 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MPHHPLLSIAIIARDEERHLAGCLRSIAGLSDDVVVIVDAQTRDATAAIATDHGCRVLIEPWRGFSAQRNLALRRCRGDW VLFIDADERLTPELFIELATWKQTTPPPDLAGYRIPRYNLFFGRRLRGGGWYPDFQLRLLRRNAAHYDEQVAVHEVATLN GTVGTLRGHLLHLNIERLDELWQKQARYALAEAMTLYRHGRRMRLRNLIGAPAREFWRRYVQLGGWRDAWLGLFLCATLA WHEVVKFCMLYGLRHMSRP
Sequences:
>Translated_259_residues MPHHPLLSIAIIARDEERHLAGCLRSIAGLSDDVVVIVDAQTRDATAAIATDHGCRVLIEPWRGFSAQRNLALRRCRGDW VLFIDADERLTPELFIELATWKQTTPPPDLAGYRIPRYNLFFGRRLRGGGWYPDFQLRLLRRNAAHYDEQVAVHEVATLN GTVGTLRGHLLHLNIERLDELWQKQARYALAEAMTLYRHGRRMRLRNLIGAPAREFWRRYVQLGGWRDAWLGLFLCATLA WHEVVKFCMLYGLRHMSRP >Mature_258_residues PHHPLLSIAIIARDEERHLAGCLRSIAGLSDDVVVIVDAQTRDATAAIATDHGCRVLIEPWRGFSAQRNLALRRCRGDWV LFIDADERLTPELFIELATWKQTTPPPDLAGYRIPRYNLFFGRRLRGGGWYPDFQLRLLRRNAAHYDEQVAVHEVATLNG TVGTLRGHLLHLNIERLDELWQKQARYALAEAMTLYRHGRRMRLRNLIGAPAREFWRRYVQLGGWRDAWLGLFLCATLAW HEVVKFCMLYGLRHMSRP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 29983; Mature: 29852
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHHPLLSIAIIARDEERHLAGCLRSIAGLSDDVVVIVDAQTRDATAAIATDHGCRVLIE CCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEE PWRGFSAQRNLALRRCRGDWVLFIDADERLTPELFIELATWKQTTPPPDLAGYRIPRYNL CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FFGRRLRGGGWYPDFQLRLLRRNAAHYDEQVAVHEVATLNGTVGTLRGHLLHLNIERLDE EECCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCEEEEEEHHHHHH LWQKQARYALAEAMTLYRHGRRMRLRNLIGAPAREFWRRYVQLGGWRDAWLGLFLCATLA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH WHEVVKFCMLYGLRHMSRP HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHHPLLSIAIIARDEERHLAGCLRSIAGLSDDVVVIVDAQTRDATAAIATDHGCRVLIE CCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEE PWRGFSAQRNLALRRCRGDWVLFIDADERLTPELFIELATWKQTTPPPDLAGYRIPRYNL CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FFGRRLRGGGWYPDFQLRLLRRNAAHYDEQVAVHEVATLNGTVGTLRGHLLHLNIERLDE EECCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCEEEEEEHHHHHH LWQKQARYALAEAMTLYRHGRRMRLRNLIGAPAREFWRRYVQLGGWRDAWLGLFLCATLA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH WHEVVKFCMLYGLRHMSRP HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]